RNA–Protein interactions for RNA: ENST00000641927.1

PHGDH-230, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,678 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-230ENST00000641927 POTEHQ6S545 545 aa18.09■□□□□ 0.49
PHGDH-230ENST00000641927 DDX42Q86XP3 938 aaKnown RBP eCLIP18.09■□□□□ 0.493e-6■■■□□ 16.1
PHGDH-230ENST00000641927 COG1Q8WTW3 980 aa18.09■□□□□ 0.49
PHGDH-230ENST00000641927 KCTD15Q96SI1 283 aaPredicted RBP18.09■□□□□ 0.49
PHGDH-230ENST00000641927 CARD9Q9H257 536 aa18.09■□□□□ 0.49
PHGDH-230ENST00000641927 POMKQ9H5K3 350 aa18.09■□□□□ 0.49
PHGDH-230ENST00000641927 PCDH18Q9HCL0 1135 aa18.09■□□□□ 0.49
PHGDH-230ENST00000641927 GDE1Q9NZC3 331 aa18.09■□□□□ 0.49
PHGDH-230ENST00000641927 HS3ST4Q9Y661 456 aa18.09■□□□□ 0.49
PHGDH-230ENST00000641927 ZNF185O15231 689 aa18.09■□□□□ 0.49
PHGDH-230ENST00000641927 KLKB1P03952 638 aa18.09■□□□□ 0.49
PHGDH-230ENST00000641927 ARL4AP40617 200 aa18.09■□□□□ 0.49
PHGDH-230ENST00000641927 MTA1Q13330 715 aa18.09■□□□□ 0.49
PHGDH-230ENST00000641927 DPYSL2Q16555 572 aa18.09■□□□□ 0.49
PHGDH-230ENST00000641927 ADAMTS19Q8TE59 1207 aa18.09■□□□□ 0.49
PHGDH-230ENST00000641927 PBKQ96KB5 322 aa18.09■□□□□ 0.49
PHGDH-230ENST00000641927 CAPZA3Q96KX2 299 aa18.09■□□□□ 0.49
PHGDH-230ENST00000641927 NECTIN4Q96NY8 510 aa18.09■□□□□ 0.49
PHGDH-230ENST00000641927 DCLK3Q9C098 648 aa18.09■□□□□ 0.49
PHGDH-230ENST00000641927 AGO1Q9UL18 857 aaKnown RBP18.09■□□□□ 0.49
PHGDH-230ENST00000641927 CDH7Q9ULB5 785 aa18.09■□□□□ 0.49
PHGDH-230ENST00000641927 FAM72CH0Y354 149 aa18.08■□□□□ 0.48
PHGDH-230ENST00000641927 ACSL4O60488 711 aa18.08■□□□□ 0.48
PHGDH-230ENST00000641927 PRLRP16471 622 aa18.08■□□□□ 0.48
PHGDH-230ENST00000641927 MMRN1Q13201 1228 aa18.08■□□□□ 0.48
PHGDH-230ENST00000641927 DPYSL3Q14195 570 aa18.08■□□□□ 0.48
PHGDH-230ENST00000641927 MS4A13Q5J8X5 152 aa18.08■□□□□ 0.48
PHGDH-230ENST00000641927 FAM78AQ5JUQ0 283 aa18.08■□□□□ 0.48
PHGDH-230ENST00000641927 FAM72AQ5TYM5 149 aa18.08■□□□□ 0.48
PHGDH-230ENST00000641927 PIK3R6Q5UE93 754 aa18.08■□□□□ 0.48
PHGDH-230ENST00000641927 KAZNQ674X7 775 aa18.08■□□□□ 0.48
PHGDH-230ENST00000641927 RAP1GAP2Q684P5 730 aa18.08■□□□□ 0.48
PHGDH-230ENST00000641927 FAM72DQ6L9T8 149 aa18.08■□□□□ 0.48
PHGDH-230ENST00000641927 MFSD7Q6UXD7 560 aa18.08■□□□□ 0.48
PHGDH-230ENST00000641927 SPOCD1Q6ZMY3 1216 aa18.08■□□□□ 0.48
PHGDH-230ENST00000641927 CHSY1Q86X52 802 aa18.08■□□□□ 0.48
PHGDH-230ENST00000641927 FAM72BQ86X60 149 aa18.08■□□□□ 0.48
PHGDH-230ENST00000641927 HLA-CQ95604 372 aa18.08■□□□□ 0.48
PHGDH-230ENST00000641927 EPAS1Q99814 870 aa18.08■□□□□ 0.48
PHGDH-230ENST00000641927 MAK16Q9BXY0 300 aaKnown RBP18.08■□□□□ 0.48
PHGDH-230ENST00000641927 OSBPL2Q9H1P3 480 aa18.08■□□□□ 0.48
PHGDH-230ENST00000641927 GOLGA6L7A0A1B0GV03 622 aa18.07■□□□□ 0.48
PHGDH-230ENST00000641927 H3BRJ5 948 aa18.07■□□□□ 0.48
PHGDH-230ENST00000641927 EEF2KO00418 725 aaKnown RBP18.07■□□□□ 0.48
PHGDH-230ENST00000641927 DAPK3O43293 454 aa18.07■□□□□ 0.48
PHGDH-230ENST00000641927 GOT1P17174 413 aa18.07■□□□□ 0.48
PHGDH-230ENST00000641927 TPI1P60174 286 aa18.07■□□□□ 0.48
PHGDH-230ENST00000641927 AMPD2Q01433 879 aa18.07■□□□□ 0.48
PHGDH-230ENST00000641927 TFDP3Q5H9I0 405 aa18.07■□□□□ 0.48
PHGDH-230ENST00000641927 RWDD4Q6NW29 188 aaKnown RBP18.07■□□□□ 0.48
PHGDH-230ENST00000641927 CELF5Q8N6W0 485 aaKnown RBP18.07■□□□□ 0.48
PHGDH-230ENST00000641927 ST13P5Q8NFI4 369 aaPredicted RBP18.07■□□□□ 0.48
PHGDH-230ENST00000641927 SMARCD2Q92925 531 aa18.07■□□□□ 0.48
PHGDH-230ENST00000641927 MS4A14Q96JA4 679 aa18.07■□□□□ 0.48
PHGDH-230ENST00000641927 ASB16Q96NS5 453 aa18.07■□□□□ 0.48
PHGDH-230ENST00000641927 HEMGNQ9BXL5 484 aa18.07■□□□□ 0.48
PHGDH-230ENST00000641927 VANGL2Q9ULK5 521 aa18.07■□□□□ 0.48
PHGDH-230ENST00000641927 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.06■□□□□ 0.48
PHGDH-230ENST00000641927 C3orf70A6NLC5 250 aaPredicted RBP18.06■□□□□ 0.48
PHGDH-230ENST00000641927 KRT10P13645 584 aa18.06■□□□□ 0.48
PHGDH-230ENST00000641927 SP100P23497 879 aaPredicted RBP18.06■□□□□ 0.48
PHGDH-230ENST00000641927 VIPR2P41587 438 aa18.06■□□□□ 0.48
PHGDH-230ENST00000641927 ARSEP51690 589 aa18.06■□□□□ 0.48
PHGDH-230ENST00000641927 MLLT6P55198 1093 aaPredicted RBP18.06■□□□□ 0.48
PHGDH-230ENST00000641927 AUHQ13825 339 aaKnown RBP18.06■□□□□ 0.48
PHGDH-230ENST00000641927 CCDC181Q5TID7 509 aa18.06■□□□□ 0.48
PHGDH-230ENST00000641927 LRRC31Q6UY01 552 aa18.06■□□□□ 0.48
PHGDH-230ENST00000641927 RFX6Q8HWS3 928 aa18.06■□□□□ 0.48
PHGDH-230ENST00000641927 C1orf74Q96LT6 269 aa18.06■□□□□ 0.48
PHGDH-230ENST00000641927 MYADMQ96S97 322 aa18.06■□□□□ 0.48
PHGDH-230ENST00000641927 DDX50Q9BQ39 737 aaKnown RBP18.06■□□□□ 0.48
PHGDH-230ENST00000641927 CWC15Q9P013 229 aaKnown RBP18.06■□□□□ 0.48
PHGDH-230ENST00000641927 PRUNE2Q8WUY3 3088 aa18.06■□□□□ 0.48
PHGDH-230ENST00000641927 E9PAM4 449 aa18.06■□□□□ 0.48
PHGDH-230ENST00000641927 F5H5T6 163 aa18.06■□□□□ 0.48
PHGDH-230ENST00000641927 LRIG2O94898 1065 aa18.06■□□□□ 0.48
PHGDH-230ENST00000641927 EPHB2P29323 1055 aa18.06■□□□□ 0.48
PHGDH-230ENST00000641927 CDKN2BP42772 138 aa18.06■□□□□ 0.48
PHGDH-230ENST00000641927 COPS2P61201 443 aa18.06■□□□□ 0.48
PHGDH-230ENST00000641927 SMAD4Q13485 552 aaKnown RBP18.06■□□□□ 0.48
PHGDH-230ENST00000641927 ANKRD20A8PQ5CZ79 823 aa18.06■□□□□ 0.48
PHGDH-230ENST00000641927 NADSYN1Q6IA69 706 aa18.06■□□□□ 0.48
PHGDH-230ENST00000641927 RFWD3Q6PCD5 774 aa18.06■□□□□ 0.48
PHGDH-230ENST00000641927 HTR3DQ70Z44 454 aa18.06■□□□□ 0.48
PHGDH-230ENST00000641927 ANKS1BQ7Z6G8 1248 aa18.06■□□□□ 0.48
PHGDH-230ENST00000641927 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.06■□□□□ 0.48
PHGDH-230ENST00000641927 SUSD6Q92537 303 aa18.06■□□□□ 0.48
PHGDH-230ENST00000641927 AZIN2Q96A70 460 aa18.06■□□□□ 0.48
PHGDH-230ENST00000641927 ZNF670Q9BS34 389 aa18.06■□□□□ 0.48
PHGDH-230ENST00000641927 OSBPL8Q9BZF1 889 aa18.06■□□□□ 0.48
PHGDH-230ENST00000641927 KIF9Q9HAQ2 790 aa18.06■□□□□ 0.48
PHGDH-230ENST00000641927 STIM2Q9P246 746 aa18.06■□□□□ 0.48
PHGDH-230ENST00000641927 ZNF510Q9Y2H8 683 aa18.06■□□□□ 0.48
PHGDH-230ENST00000641927 HELZP42694 1942 aaKnown RBP18.05■□□□□ 0.48
PHGDH-230ENST00000641927 E2F8A0AVK6 867 aa18.05■□□□□ 0.48
PHGDH-230ENST00000641927 GRXCR2A6NFK2 248 aa18.05■□□□□ 0.48
PHGDH-230ENST00000641927 CES2O00748 559 aa18.05■□□□□ 0.48
PHGDH-230ENST00000641927 TRDMT1O14717 391 aaKnown RBP18.05■□□□□ 0.48
PHGDH-230ENST00000641927 GREM1O60565 184 aa18.05■□□□□ 0.48
PHGDH-230ENST00000641927 FGGP02679 453 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms