RNA–Protein interactions for RNA: ENST00000641213.1

PHGDH-211, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-211ENST00000641213 DCLK1O15075 740 aa17.59■□□□□ 0.41
PHGDH-211ENST00000641213 OPHN1O60890 802 aa17.59■□□□□ 0.41
PHGDH-211ENST00000641213 STK10O94804 968 aaKnown RBP17.59■□□□□ 0.41
PHGDH-211ENST00000641213 USP17L7P0C7H9 530 aa17.59■□□□□ 0.41
PHGDH-211ENST00000641213 MLNP12872 115 aa17.59■□□□□ 0.41
PHGDH-211ENST00000641213 NQO1P15559 274 aaKnown RBP17.59■□□□□ 0.41
PHGDH-211ENST00000641213 KCNJ2P63252 427 aa17.59■□□□□ 0.41
PHGDH-211ENST00000641213 SETDB1Q15047 1291 aa17.59■□□□□ 0.41
PHGDH-211ENST00000641213 UPP1Q16831 310 aa17.59■□□□□ 0.41
PHGDH-211ENST00000641213 FAM72AQ5TYM5 149 aa17.59■□□□□ 0.41
PHGDH-211ENST00000641213 FAM72DQ6L9T8 149 aa17.59■□□□□ 0.41
PHGDH-211ENST00000641213 SAPCD2Q86UD0 394 aa17.59■□□□□ 0.41
PHGDH-211ENST00000641213 FAM72BQ86X60 149 aa17.59■□□□□ 0.41
PHGDH-211ENST00000641213 PDCD7Q8N8D1 485 aaKnown RBP17.59■□□□□ 0.41
PHGDH-211ENST00000641213 NTAN1Q96AB6 310 aa17.59■□□□□ 0.41
PHGDH-211ENST00000641213 OXNAD1Q96HP4 312 aaPredicted RBP17.59■□□□□ 0.41
PHGDH-211ENST00000641213 UPF3AQ9H1J1 476 aaKnown RBP17.59■□□□□ 0.41
PHGDH-211ENST00000641213 PRDM12Q9H4Q4 367 aa17.59■□□□□ 0.41
PHGDH-211ENST00000641213 ANLNQ9NQW6 1124 aa17.59■□□□□ 0.41
PHGDH-211ENST00000641213 PTCH2Q9Y6C5 1203 aa17.59■□□□□ 0.41
PHGDH-211ENST00000641213 NLRC5Q86WI3 1866 aa17.59■□□□□ 0.41
PHGDH-211ENST00000641213 PATJQ8NI35 1801 aa17.59■□□□□ 0.41
PHGDH-211ENST00000641213 HHLA1C9JL84 531 aa17.59■□□□□ 0.41
PHGDH-211ENST00000641213 I6L893 689 aaPredicted RBP17.59■□□□□ 0.41
PHGDH-211ENST00000641213 COPEO14579 308 aa17.59■□□□□ 0.41
PHGDH-211ENST00000641213 GPR182O15218 404 aa17.59■□□□□ 0.41
PHGDH-211ENST00000641213 CCNB1P14635 433 aa17.59■□□□□ 0.41
PHGDH-211ENST00000641213 ALDH3A1P30838 453 aa17.59■□□□□ 0.41
PHGDH-211ENST00000641213 RPL9P32969 192 aaKnown RBP17.59■□□□□ 0.41
PHGDH-211ENST00000641213 AIF1P55008 147 aa17.59■□□□□ 0.41
PHGDH-211ENST00000641213 INHBEP58166 350 aa17.59■□□□□ 0.41
PHGDH-211ENST00000641213 WASHC5Q12768 1159 aa17.59■□□□□ 0.41
PHGDH-211ENST00000641213 TIGD5Q53EQ6 642 aa17.59■□□□□ 0.41
PHGDH-211ENST00000641213 FYB2Q5VWT5 728 aa17.59■□□□□ 0.41
PHGDH-211ENST00000641213 ASRGL1Q7L266 308 aa17.59■□□□□ 0.41
PHGDH-211ENST00000641213 CTU1Q7Z7A3 348 aaKnown RBP17.59■□□□□ 0.41
PHGDH-211ENST00000641213 MRPL10Q7Z7H8 261 aaKnown RBP17.59■□□□□ 0.41
PHGDH-211ENST00000641213 TP53INP2Q8IXH6 220 aa17.59■□□□□ 0.41
PHGDH-211ENST00000641213 CCNYQ8ND76 341 aa17.59■□□□□ 0.41
PHGDH-211ENST00000641213 TRIB2Q92519 343 aa17.59■□□□□ 0.41
PHGDH-211ENST00000641213 KLHL29Q96CT2 875 aa17.59■□□□□ 0.41
PHGDH-211ENST00000641213 STAMBPL1Q96FJ0 436 aa17.59■□□□□ 0.41
PHGDH-211ENST00000641213 LRRC37BQ96QE4 947 aa17.59■□□□□ 0.41
PHGDH-211ENST00000641213 SRPK1Q96SB4 655 aaKnown RBP17.59■□□□□ 0.41
PHGDH-211ENST00000641213 CEP41Q9BYV8 373 aa17.59■□□□□ 0.41
PHGDH-211ENST00000641213 NPHS2Q9NP85 383 aa17.59■□□□□ 0.41
PHGDH-211ENST00000641213 NMRK2Q9NPI5 230 aa17.59■□□□□ 0.41
PHGDH-211ENST00000641213 EIF2B3Q9NR50 452 aaKnown RBP17.59■□□□□ 0.41
PHGDH-211ENST00000641213 MOCS1Q9NZB8 636 aa17.59■□□□□ 0.41
PHGDH-211ENST00000641213 WDR27A2RRH5 827 aa17.58■□□□□ 0.4
PHGDH-211ENST00000641213 PPP1R12AO14974 1030 aaPredicted RBP17.58■□□□□ 0.4
PHGDH-211ENST00000641213 RFPL1O75677 317 aa17.58■□□□□ 0.4
PHGDH-211ENST00000641213 DCTN3O75935 186 aa17.58■□□□□ 0.4
PHGDH-211ENST00000641213 AMHP03971 560 aa17.58■□□□□ 0.4
PHGDH-211ENST00000641213 NCAM1P13591 858 aa17.58■□□□□ 0.4
PHGDH-211ENST00000641213 SCAPQ12770 1279 aa17.58■□□□□ 0.4
PHGDH-211ENST00000641213 SEMA3BQ13214 749 aa17.58■□□□□ 0.4
PHGDH-211ENST00000641213 BMPR2Q13873 1038 aa17.58■□□□□ 0.4
PHGDH-211ENST00000641213 SNCBQ16143 134 aa17.58■□□□□ 0.4
PHGDH-211ENST00000641213 STEAP4Q687X5 459 aa17.58■□□□□ 0.4
PHGDH-211ENST00000641213 LRRC8BQ6P9F7 803 aa17.58■□□□□ 0.4
PHGDH-211ENST00000641213 CDHR3Q6ZTQ4 885 aa17.58■□□□□ 0.4
PHGDH-211ENST00000641213 APBB2Q92870 758 aa17.58■□□□□ 0.4
PHGDH-211ENST00000641213 ERP27Q96DN0 273 aa17.58■□□□□ 0.4
PHGDH-211ENST00000641213 FERMT1Q9BQL6 677 aa17.58■□□□□ 0.4
PHGDH-211ENST00000641213 RHOBTB2Q9BYZ6 727 aa17.58■□□□□ 0.4
PHGDH-211ENST00000641213 SEPT10Q9P0V9 454 aa17.58■□□□□ 0.4
PHGDH-211ENST00000641213 KRT38O76015 456 aa17.57■□□□□ 0.4
PHGDH-211ENST00000641213 LTFP02788 710 aa17.57■□□□□ 0.4
PHGDH-211ENST00000641213 SLC10A3P09131 477 aa17.57■□□□□ 0.4
PHGDH-211ENST00000641213 CCNFP41002 786 aa17.57■□□□□ 0.4
PHGDH-211ENST00000641213 SKIV2L2P42285 1042 aaKnown RBP17.57■□□□□ 0.4
PHGDH-211ENST00000641213 CYS1Q717R9 158 aa17.57■□□□□ 0.4
PHGDH-211ENST00000641213 BHLHA9Q7RTU4 235 aa17.57■□□□□ 0.4
PHGDH-211ENST00000641213 RPAINQ86UA6 219 aa17.57■□□□□ 0.4
PHGDH-211ENST00000641213 ZNF567Q8N184 647 aa17.57■□□□□ 0.4
PHGDH-211ENST00000641213 TTC17Q96AE7 1141 aa17.57■□□□□ 0.4
PHGDH-211ENST00000641213 MTBPQ96DY7 904 aa17.57■□□□□ 0.4
PHGDH-211ENST00000641213 PGAP3Q96FM1 320 aaPredicted RBP17.57■□□□□ 0.4
PHGDH-211ENST00000641213 SMARCD1Q96GM5 515 aa17.57■□□□□ 0.4
PHGDH-211ENST00000641213 RTP3Q9BQQ7 232 aa17.57■□□□□ 0.4
PHGDH-211ENST00000641213 ARHGEF3Q9NR81 526 aa17.57■□□□□ 0.4
PHGDH-211ENST00000641213 FBXW11Q9UKB1 542 aa17.57■□□□□ 0.4
PHGDH-211ENST00000641213 TRIM33Q9UPN9 1127 aa17.57■□□□□ 0.4
PHGDH-211ENST00000641213 COL4A4P53420 1690 aaPredicted RBP17.57■□□□□ 0.4
PHGDH-211ENST00000641213 HMX2A2RU54 273 aa17.57■□□□□ 0.4
PHGDH-211ENST00000641213 SDR42E2A6NKP2 422 aa17.57■□□□□ 0.4
PHGDH-211ENST00000641213 I3L4J1 428 aa17.57■□□□□ 0.4
PHGDH-211ENST00000641213 UNC5CO95185 931 aa17.57■□□□□ 0.4
PHGDH-211ENST00000641213 ERCC2P18074 760 aa17.57■□□□□ 0.4
PHGDH-211ENST00000641213 PSMB4P28070 264 aa17.57■□□□□ 0.4
PHGDH-211ENST00000641213 PCSK1P29120 753 aa17.57■□□□□ 0.4
PHGDH-211ENST00000641213 SERPINB4P48594 390 aa17.57■□□□□ 0.4
PHGDH-211ENST00000641213 MNAT1P51948 309 aa17.57■□□□□ 0.4
PHGDH-211ENST00000641213 CRADDP78560 199 aa17.57■□□□□ 0.4
PHGDH-211ENST00000641213 OVGP1Q12889 678 aa17.57■□□□□ 0.4
PHGDH-211ENST00000641213 PARP6Q2NL67 630 aa17.57■□□□□ 0.4
PHGDH-211ENST00000641213 PLEKHG4Q58EX7 1191 aa17.57■□□□□ 0.4
PHGDH-211ENST00000641213 MFSD14CQ5VZR4 134 aa17.57■□□□□ 0.4
PHGDH-211ENST00000641213 KIF2BQ8N4N8 673 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms