RNA–Protein interactions for RNA: ENST00000640748.1

ERGIC3-220, Transcript of ERGIC and golgi 3, humanhuman

TSL 5 BASIC

Gene ERGIC3, Length 832 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-220ENST00000640748 MAN1A1P33908 653 aa12.4□□□□□ -0.42
ERGIC3-220ENST00000640748 AVPR1AP37288 418 aa12.4□□□□□ -0.42
ERGIC3-220ENST00000640748 GPD2P43304 727 aa12.4□□□□□ -0.42
ERGIC3-220ENST00000640748 GALK1P51570 392 aa12.4□□□□□ -0.42
ERGIC3-220ENST00000640748 RWDD2BP57060 319 aa12.4□□□□□ -0.42
ERGIC3-220ENST00000640748 RNASE9P60153 205 aaKnown RBP12.4□□□□□ -0.42
ERGIC3-220ENST00000640748 GRSF1Q12849 480 aaKnown RBP eCLIP12.4□□□□□ -0.42
ERGIC3-220ENST00000640748 BRD3Q15059 726 aa12.4□□□□□ -0.42
ERGIC3-220ENST00000640748 TAF12Q16514 161 aa12.4□□□□□ -0.42
ERGIC3-220ENST00000640748 GOLGA7BQ2TAP0 167 aa12.4□□□□□ -0.42
ERGIC3-220ENST00000640748 PTPN20Q4JDL3 420 aa12.4□□□□□ -0.42
ERGIC3-220ENST00000640748 GLE1Q53GS7 698 aaKnown RBP12.4□□□□□ -0.42
ERGIC3-220ENST00000640748 PLA2G2CQ5R387 149 aa12.4□□□□□ -0.42
ERGIC3-220ENST00000640748 ARHGAP17Q68EM7 881 aa12.4□□□□□ -0.42
ERGIC3-220ENST00000640748 DCUN1D2Q6PH85 259 aa12.4□□□□□ -0.42
ERGIC3-220ENST00000640748 FBXO38Q6PIJ6 1188 aa12.4□□□□□ -0.42
ERGIC3-220ENST00000640748 ACOT1Q86TX2 421 aa12.4□□□□□ -0.42
ERGIC3-220ENST00000640748 DCP1BQ8IZD4 617 aaKnown RBP12.4□□□□□ -0.42
ERGIC3-220ENST00000640748 ADGRF2Q8IZF7 708 aa12.4□□□□□ -0.42
ERGIC3-220ENST00000640748 CRYBG2Q8N1P7 616 aa12.4□□□□□ -0.42
ERGIC3-220ENST00000640748 C3orf20Q8ND61 904 aa12.4□□□□□ -0.42
ERGIC3-220ENST00000640748 IPO4Q8TEX9 1081 aaKnown RBP12.4□□□□□ -0.42
ERGIC3-220ENST00000640748 KBTBD7Q8WVZ9 684 aa12.4□□□□□ -0.42
ERGIC3-220ENST00000640748 LOXL4Q96JB6 756 aa12.4□□□□□ -0.42
ERGIC3-220ENST00000640748 SMOC1Q9H4F8 434 aa12.4□□□□□ -0.42
ERGIC3-220ENST00000640748 SYNCQ9H7C4 482 aa12.4□□□□□ -0.42
ERGIC3-220ENST00000640748 HESX1Q9UBX0 185 aa12.4□□□□□ -0.42
ERGIC3-220ENST00000640748 TSPAN16Q9UKR8 245 aa12.4□□□□□ -0.42
ERGIC3-220ENST00000640748 RAB21Q9UL25 225 aa12.4□□□□□ -0.42
ERGIC3-220ENST00000640748 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.4□□□□□ -0.42
ERGIC3-220ENST00000640748 DENND4CQ5VZ89 1909 aa12.4□□□□□ -0.42
ERGIC3-220ENST00000640748 RALGAPA1Q6GYQ0 2036 aa12.4□□□□□ -0.42
ERGIC3-220ENST00000640748 GREB1Q4ZG55 1949 aa12.39□□□□□ -0.43
ERGIC3-220ENST00000640748 TMEM191CA6NGB0 347 aa12.39□□□□□ -0.43
ERGIC3-220ENST00000640748 SOBPA7XYQ1 873 aa12.39□□□□□ -0.43
ERGIC3-220ENST00000640748 FOXD2O60548 495 aaPredicted RBP12.39□□□□□ -0.43
ERGIC3-220ENST00000640748 RNF40O75150 1001 aa12.39□□□□□ -0.43
ERGIC3-220ENST00000640748 CYP2F1P24903 491 aa12.39□□□□□ -0.43
ERGIC3-220ENST00000640748 GJA4P35212 333 aa12.39□□□□□ -0.43
ERGIC3-220ENST00000640748 GABRB2P47870 512 aa12.39□□□□□ -0.43
ERGIC3-220ENST00000640748 PEX5P50542 639 aa12.39□□□□□ -0.43
ERGIC3-220ENST00000640748 SNX16P57768 344 aa12.39□□□□□ -0.43
ERGIC3-220ENST00000640748 PSMC1P62191 440 aaKnown RBP12.39□□□□□ -0.43
ERGIC3-220ENST00000640748 ZNF77Q15935 545 aa12.39□□□□□ -0.43
ERGIC3-220ENST00000640748 DDR2Q16832 855 aa12.39□□□□□ -0.43
ERGIC3-220ENST00000640748 LONRF2Q1L5Z9 754 aa12.39□□□□□ -0.43
ERGIC3-220ENST00000640748 PPP1R15BQ5SWA1 713 aa12.39□□□□□ -0.43
ERGIC3-220ENST00000640748 PPP1R26Q5T8A7 1209 aaPredicted RBP12.39□□□□□ -0.43
ERGIC3-220ENST00000640748 OSTM1Q86WC4 334 aa12.39□□□□□ -0.43
ERGIC3-220ENST00000640748 TMEM86AQ8N2M4 240 aa12.39□□□□□ -0.43
ERGIC3-220ENST00000640748 UBA3Q8TBC4 463 aa12.39□□□□□ -0.43
ERGIC3-220ENST00000640748 KRT35Q92764 455 aa12.39□□□□□ -0.43
ERGIC3-220ENST00000640748 TRMT2BQ96GJ1 504 aaKnown RBP12.39□□□□□ -0.43
ERGIC3-220ENST00000640748 ZC3H10Q96K80 434 aaKnown RBP12.39□□□□□ -0.43
ERGIC3-220ENST00000640748 TNIP3Q96KP6 325 aa12.39□□□□□ -0.43
ERGIC3-220ENST00000640748 MYRFLQ96LU7 910 aa12.39□□□□□ -0.43
ERGIC3-220ENST00000640748 CYP2S1Q96SQ9 504 aa12.39□□□□□ -0.43
ERGIC3-220ENST00000640748 ACBD6Q9BR61 282 aa12.39□□□□□ -0.43
ERGIC3-220ENST00000640748 TRIM7Q9C029 511 aa12.39□□□□□ -0.43
ERGIC3-220ENST00000640748 KIF9Q9HAQ2 790 aa12.39□□□□□ -0.43
ERGIC3-220ENST00000640748 CYTH4Q9UIA0 394 aa12.39□□□□□ -0.43
ERGIC3-220ENST00000640748 TMEM59LQ9UK28 342 aa12.39□□□□□ -0.43
ERGIC3-220ENST00000640748 MAGED2Q9UNF1 606 aaPredicted RBP12.39□□□□□ -0.43
ERGIC3-220ENST00000640748 NME7Q9Y5B8 376 aa12.39□□□□□ -0.43
ERGIC3-220ENST00000640748 SPAG17Q6Q759 2223 aa12.39□□□□□ -0.43
ERGIC3-220ENST00000640748 FRYQ5TBA9 3013 aa12.39□□□□□ -0.43
ERGIC3-220ENST00000640748 ATG2BQ96BY7 2078 aa12.39□□□□□ -0.43
ERGIC3-220ENST00000640748 CEP295Q9C0D2 2601 aa12.39□□□□□ -0.43
ERGIC3-220ENST00000640748 CHD6Q8TD26 2715 aa12.39□□□□□ -0.43
ERGIC3-220ENST00000640748 EML5Q05BV3 1969 aa12.38□□□□□ -0.43
ERGIC3-220ENST00000640748 SIGLEC16A6NMB1 481 aa12.38□□□□□ -0.43
ERGIC3-220ENST00000640748 GOLGA8SH3BPF8 625 aa12.38□□□□□ -0.43
ERGIC3-220ENST00000640748 KRIT1O00522 736 aa12.38□□□□□ -0.43
ERGIC3-220ENST00000640748 GABRDO14764 452 aa12.38□□□□□ -0.43
ERGIC3-220ENST00000640748 PSTPIP1O43586 416 aa12.38□□□□□ -0.43
ERGIC3-220ENST00000640748 ATG13O75143 517 aa12.38□□□□□ -0.43
ERGIC3-220ENST00000640748 ERLIN1O75477 346 aa12.38□□□□□ -0.43
ERGIC3-220ENST00000640748 PDGFRBP09619 1106 aa12.38□□□□□ -0.43
ERGIC3-220ENST00000640748 CSH1P0DML2 217 aa12.38□□□□□ -0.43
ERGIC3-220ENST00000640748 CSH2P0DML3 217 aa12.38□□□□□ -0.43
ERGIC3-220ENST00000640748 PMLP29590 882 aa12.38□□□□□ -0.43
ERGIC3-220ENST00000640748 CLCN6P51797 869 aa12.38□□□□□ -0.43
ERGIC3-220ENST00000640748 TSPY1Q01534 308 aa12.38□□□□□ -0.43
ERGIC3-220ENST00000640748 USP4Q13107 963 aa12.38□□□□□ -0.43
ERGIC3-220ENST00000640748 PDCLQ13371 301 aa12.38□□□□□ -0.43
ERGIC3-220ENST00000640748 PIGHQ14442 188 aaPredicted RBP12.38□□□□□ -0.43
ERGIC3-220ENST00000640748 PDGFRLQ15198 375 aa12.38□□□□□ -0.43
ERGIC3-220ENST00000640748 NFE2Q16621 373 aaPredicted RBP12.38□□□□□ -0.43
ERGIC3-220ENST00000640748 ST3GAL2Q16842 350 aa12.38□□□□□ -0.43
ERGIC3-220ENST00000640748 PLK5Q496M5 336 aa12.38□□□□□ -0.43
ERGIC3-220ENST00000640748 AASDHQ4L235 1098 aaPredicted RBP12.38□□□□□ -0.43
ERGIC3-220ENST00000640748 INTS6LQ5JSJ4 861 aaKnown RBP12.38□□□□□ -0.43
ERGIC3-220ENST00000640748 N4BP2L1Q5TBK1 243 aaPredicted RBP12.38□□□□□ -0.43
ERGIC3-220ENST00000640748 DCAF12L1Q5VU92 463 aa12.38□□□□□ -0.43
ERGIC3-220ENST00000640748 C8orf74Q6P047 294 aa12.38□□□□□ -0.43
ERGIC3-220ENST00000640748 WDR93Q6P2C0 686 aa12.38□□□□□ -0.43
ERGIC3-220ENST00000640748 XYLT1Q86Y38 959 aa12.38□□□□□ -0.43
ERGIC3-220ENST00000640748 CPNE8Q86YQ8 564 aa12.38□□□□□ -0.43
ERGIC3-220ENST00000640748 RHOT1Q8IXI2 618 aa12.38□□□□□ -0.43
ERGIC3-220ENST00000640748 C12orf29Q8N999 325 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms