RNA–Protein interactions for RNA: ENST00000640306.1

HNRNPU-228, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 2,917 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-228ENST00000640306 KCTD15Q96SI1 283 aaPredicted RBP17.04■□□□□ 0.32
HNRNPU-228ENST00000640306 PRMT7Q9NVM4 692 aaPredicted RBP17.04■□□□□ 0.32
HNRNPU-228ENST00000640306 SOX13Q9UN79 622 aa17.04■□□□□ 0.32
HNRNPU-228ENST00000640306 G3BP2Q9UN86 482 aaKnown RBP17.04■□□□□ 0.32
HNRNPU-228ENST00000640306 APOBEC2Q9Y235 224 aaKnown RBP17.04■□□□□ 0.32
HNRNPU-228ENST00000640306 ADM5C9JUS6 153 aa17.04■□□□□ 0.32
HNRNPU-228ENST00000640306 CPOXP36551 454 aa17.04■□□□□ 0.32
HNRNPU-228ENST00000640306 RBP5P82980 135 aa17.04■□□□□ 0.32
HNRNPU-228ENST00000640306 CDC16Q13042 620 aa17.04■□□□□ 0.32
HNRNPU-228ENST00000640306 DNAL1Q4LDG9 190 aa17.04■□□□□ 0.32
HNRNPU-228ENST00000640306 CFAP157Q5JU67 520 aa17.04■□□□□ 0.32
HNRNPU-228ENST00000640306 MAVSQ7Z434 540 aa17.04■□□□□ 0.32
HNRNPU-228ENST00000640306 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.04■□□□□ 0.329e-9■■■■■ 38.6
HNRNPU-228ENST00000640306 CCNYQ8ND76 341 aa17.04■□□□□ 0.32
HNRNPU-228ENST00000640306 AZIN2Q96A70 460 aa17.04■□□□□ 0.32
HNRNPU-228ENST00000640306 PGBD4Q96DM1 585 aa17.04■□□□□ 0.32
HNRNPU-228ENST00000640306 AGAP3Q96P47 875 aa17.04■□□□□ 0.32
HNRNPU-228ENST00000640306 CSPG4P5Q96PW8 444 aa17.04■□□□□ 0.32
HNRNPU-228ENST00000640306 TXNRD2Q9NNW7 524 aa17.04■□□□□ 0.32
HNRNPU-228ENST00000640306 HESX1Q9UBX0 185 aa17.04■□□□□ 0.32
HNRNPU-228ENST00000640306 ASB3Q9Y575 518 aa17.04■□□□□ 0.32
HNRNPU-228ENST00000640306 MAGEA13PA6NCF6 341 aa17.03■□□□□ 0.32
HNRNPU-228ENST00000640306 GAS2O43903 313 aaKnown RBP17.03■□□□□ 0.32
HNRNPU-228ENST00000640306 C22orf31O95567 290 aa17.03■□□□□ 0.32
HNRNPU-228ENST00000640306 ZNF286BP0CG31 522 aa17.03■□□□□ 0.32
HNRNPU-228ENST00000640306 CD1EP15812 388 aa17.03■□□□□ 0.32
HNRNPU-228ENST00000640306 MAGEA3P43357 314 aa17.03■□□□□ 0.32
HNRNPU-228ENST00000640306 PGGT1BP53609 377 aa17.03■□□□□ 0.32
HNRNPU-228ENST00000640306 USP4Q13107 963 aa17.03■□□□□ 0.32
HNRNPU-228ENST00000640306 ITGA9Q13797 1035 aa17.03■□□□□ 0.32
HNRNPU-228ENST00000640306 Q3C1V9 767 aa17.03■□□□□ 0.32
HNRNPU-228ENST00000640306 COLGALT1Q8NBJ5 622 aa17.03■□□□□ 0.32
HNRNPU-228ENST00000640306 MCUQ8NE86 351 aa17.03■□□□□ 0.32
HNRNPU-228ENST00000640306 ECSITQ9BQ95 431 aa17.03■□□□□ 0.32
HNRNPU-228ENST00000640306 ZNF670Q9BS34 389 aa17.03■□□□□ 0.32
HNRNPU-228ENST00000640306 EBF3Q9H4W6 596 aa17.03■□□□□ 0.32
HNRNPU-228ENST00000640306 TMEM216Q9P0N5 145 aa17.03■□□□□ 0.32
HNRNPU-228ENST00000640306 SIN3BO75182 1162 aa17.03■□□□□ 0.32
HNRNPU-228ENST00000640306 AP1G2O75843 785 aa17.03■□□□□ 0.32
HNRNPU-228ENST00000640306 LYNP07948 512 aa17.03■□□□□ 0.32
HNRNPU-228ENST00000640306 ATICP31939 592 aa17.03■□□□□ 0.32
HNRNPU-228ENST00000640306 SATB1Q01826 763 aa17.03■□□□□ 0.32
HNRNPU-228ENST00000640306 WASHC5Q12768 1159 aa17.03■□□□□ 0.32
HNRNPU-228ENST00000640306 STILQ15468 1287 aa17.03■□□□□ 0.32
HNRNPU-228ENST00000640306 FAM91A1Q658Y4 838 aa17.03■□□□□ 0.32
HNRNPU-228ENST00000640306 PACS1Q6VY07 963 aa17.03■□□□□ 0.32
HNRNPU-228ENST00000640306 PLPPR4Q7Z2D5 763 aa17.03■□□□□ 0.32
HNRNPU-228ENST00000640306 APOBEC3FQ8IUX4 373 aaKnown RBP17.03■□□□□ 0.32
HNRNPU-228ENST00000640306 OTUD5Q96G74 571 aa17.03■□□□□ 0.32
HNRNPU-228ENST00000640306 FRMD8Q9BZ67 464 aaPredicted RBP17.03■□□□□ 0.32
HNRNPU-228ENST00000640306 MTMR10Q9NXD2 777 aa17.03■□□□□ 0.32
HNRNPU-228ENST00000640306 MCM3APO60318 1980 aa17.03■□□□□ 0.32
HNRNPU-228ENST00000640306 FESP07332 822 aa17.03■□□□□ 0.32
HNRNPU-228ENST00000640306 PITX1P78337 314 aaPredicted RBP17.03■□□□□ 0.32
HNRNPU-228ENST00000640306 INCA1Q0VD86 236 aa17.03■□□□□ 0.32
HNRNPU-228ENST00000640306 TUBB3Q13509 450 aa17.03■□□□□ 0.32
HNRNPU-228ENST00000640306 PCLAFQ15004 111 aa17.03■□□□□ 0.32
HNRNPU-228ENST00000640306 PHTF2Q8N3S3 785 aa17.03■□□□□ 0.32
HNRNPU-228ENST00000640306 C18orf25Q96B23 403 aaPredicted RBP17.03■□□□□ 0.32
HNRNPU-228ENST00000640306 FAM149B1Q96BN6 582 aa17.03■□□□□ 0.32
HNRNPU-228ENST00000640306 LRRC39Q96DD0 335 aa17.03■□□□□ 0.32
HNRNPU-228ENST00000640306 FGD4Q96M96 766 aa17.03■□□□□ 0.32
HNRNPU-228ENST00000640306 GBP5Q96PP8 586 aa17.03■□□□□ 0.32
HNRNPU-228ENST00000640306 SMARCAD1Q9H4L7 1026 aa17.03■□□□□ 0.32
HNRNPU-228ENST00000640306 MOCS1Q9NZB8 636 aa17.03■□□□□ 0.32
HNRNPU-228ENST00000640306 CEP350Q5VT06 3117 aa17.02■□□□□ 0.32
HNRNPU-228ENST00000640306 CCDC78A2IDD5 438 aa17.02■□□□□ 0.32
HNRNPU-228ENST00000640306 F8W8V4 182 aa17.02■□□□□ 0.32
HNRNPU-228ENST00000640306 HBP1O60381 514 aa17.02■□□□□ 0.32
HNRNPU-228ENST00000640306 PLIN3O60664 434 aa17.02■□□□□ 0.32
HNRNPU-228ENST00000640306 GCATO75600 419 aa17.02■□□□□ 0.32
HNRNPU-228ENST00000640306 TYK2P29597 1187 aa17.02■□□□□ 0.32
HNRNPU-228ENST00000640306 ASPHQ12797 758 aa17.02■□□□□ 0.32
HNRNPU-228ENST00000640306 NCBP2-AS2Q69YL0 99 aa17.02■□□□□ 0.32
HNRNPU-228ENST00000640306 RNF111Q6ZNA4 994 aa17.02■□□□□ 0.32
HNRNPU-228ENST00000640306 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.02■□□□□ 0.32
HNRNPU-228ENST00000640306 HTR3CQ8WXA8 447 aa17.02■□□□□ 0.32
HNRNPU-228ENST00000640306 SYBUQ9NX95 663 aa17.02■□□□□ 0.32
HNRNPU-228ENST00000640306 TUBGCP4Q9UGJ1 667 aa17.02■□□□□ 0.32
HNRNPU-228ENST00000640306 SCN1AP35498 2009 aa17.02■□□□□ 0.32
HNRNPU-228ENST00000640306 E9PBE3 544 aa17.02■□□□□ 0.31
HNRNPU-228ENST00000640306 IRF6O14896 467 aa17.02■□□□□ 0.31
HNRNPU-228ENST00000640306 DCXO43602 365 aa17.02■□□□□ 0.31
HNRNPU-228ENST00000640306 KLHL41O60662 606 aa17.02■□□□□ 0.31
HNRNPU-228ENST00000640306 USP2O75604 605 aaPredicted RBP17.02■□□□□ 0.31
HNRNPU-228ENST00000640306 MCF2P10911 925 aa17.02■□□□□ 0.31
HNRNPU-228ENST00000640306 PSMB4P28070 264 aa17.02■□□□□ 0.31
HNRNPU-228ENST00000640306 SERPINB9P50453 376 aa17.02■□□□□ 0.31
HNRNPU-228ENST00000640306 HPS6Q86YV9 775 aa17.02■□□□□ 0.31
HNRNPU-228ENST00000640306 NME8Q8N427 588 aa17.02■□□□□ 0.31
HNRNPU-228ENST00000640306 TBCBQ99426 244 aa17.02■□□□□ 0.31
HNRNPU-228ENST00000640306 ASB7Q9H672 318 aa17.02■□□□□ 0.31
HNRNPU-228ENST00000640306 MDM4O15151 490 aa17.01■□□□□ 0.31
HNRNPU-228ENST00000640306 CREB3O43889 395 aa17.01■□□□□ 0.31
HNRNPU-228ENST00000640306 MFSD11O43934 449 aa17.01■□□□□ 0.31
HNRNPU-228ENST00000640306 RNASEH1O60930 286 aaKnown RBP17.01■□□□□ 0.31
HNRNPU-228ENST00000640306 ITGA2BP08514 1039 aa17.01■□□□□ 0.31
HNRNPU-228ENST00000640306 SERPINB6P35237 376 aa17.01■□□□□ 0.31
HNRNPU-228ENST00000640306 CUL3Q13618 768 aa17.01■□□□□ 0.31
HNRNPU-228ENST00000640306 EFHC1Q5JVL4 640 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms