RNA–Protein interactions for RNA: ENST00000639856.1

TRIM3-215, Transcript of tripartite motif containing 3, humanhuman

TSL 5 BASIC

Gene TRIM3, Length 2,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-215ENST00000639856 KBTBD12Q3ZCT8 623 aa15.59■□□□□ 0.09
TRIM3-215ENST00000639856 FAXCQ5TGI0 409 aa15.59■□□□□ 0.09
TRIM3-215ENST00000639856 ALKBH8Q96BT7 664 aaKnown RBP15.59■□□□□ 0.09
TRIM3-215ENST00000639856 PNPLA8Q9NP80 782 aa15.59■□□□□ 0.09
TRIM3-215ENST00000639856 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.59■□□□□ 0.09
TRIM3-215ENST00000639856 GRID1Q9ULK0 1009 aa15.59■□□□□ 0.09
TRIM3-215ENST00000639856 VWA8A3KMH1 1905 aa15.59■□□□□ 0.09
TRIM3-215ENST00000639856 ZNF638Q14966 1978 aaKnown RBP15.58■□□□□ 0.09
TRIM3-215ENST00000639856 SYNJ2BP-COX16A0A087WUM0 186 aa15.58■□□□□ 0.08
TRIM3-215ENST00000639856 YJEFN3A6XGL0 299 aa15.58■□□□□ 0.08
TRIM3-215ENST00000639856 E7ENQ6 273 aa15.58■□□□□ 0.08
TRIM3-215ENST00000639856 RASSF9O75901 435 aa15.58■□□□□ 0.08
TRIM3-215ENST00000639856 MNX1P50219 401 aaPredicted RBP15.58■□□□□ 0.08
TRIM3-215ENST00000639856 YWHAGP61981 247 aaKnown RBP eCLIP15.58■□□□□ 0.08
TRIM3-215ENST00000639856 DNAJC3Q13217 504 aa15.58■□□□□ 0.08
TRIM3-215ENST00000639856 NCBP2-AS2Q69YL0 99 aa15.58■□□□□ 0.08
TRIM3-215ENST00000639856 KCNT2Q6UVM3 1135 aa15.58■□□□□ 0.08
TRIM3-215ENST00000639856 FAM47EQ6ZV65 393 aa15.58■□□□□ 0.08
TRIM3-215ENST00000639856 CAND1Q86VP6 1230 aaKnown RBP15.58■□□□□ 0.08
TRIM3-215ENST00000639856 FAM131BQ86XD5 332 aa15.58■□□□□ 0.08
TRIM3-215ENST00000639856 PSTKQ8IV42 348 aaKnown RBP15.58■□□□□ 0.08
TRIM3-215ENST00000639856 LRRN4Q8WUT4 740 aa15.58■□□□□ 0.08
TRIM3-215ENST00000639856 SLC44A1Q8WWI5 657 aa15.58■□□□□ 0.08
TRIM3-215ENST00000639856 PPP1R12CQ9BZL4 782 aa15.58■□□□□ 0.08
TRIM3-215ENST00000639856 SLC40A1Q9NP59 571 aa15.58■□□□□ 0.08
TRIM3-215ENST00000639856 COX16Q9P0S2 106 aa15.58■□□□□ 0.08
TRIM3-215ENST00000639856 RCOR3Q9P2K3 495 aaPredicted RBP15.58■□□□□ 0.08
TRIM3-215ENST00000639856 FZD10Q9ULW2 581 aa15.58■□□□□ 0.08
TRIM3-215ENST00000639856 STARD13Q9Y3M8 1113 aa15.58■□□□□ 0.08
TRIM3-215ENST00000639856 USP3Q9Y6I4 520 aa15.58■□□□□ 0.08
TRIM3-215ENST00000639856 IKBKGQ9Y6K9 419 aa15.58■□□□□ 0.08
TRIM3-215ENST00000639856 FYNP06241 537 aa15.58■□□□□ 0.08
TRIM3-215ENST00000639856 GOT1P17174 413 aa15.58■□□□□ 0.08
TRIM3-215ENST00000639856 HNRNPH1P31943 449 aaKnown RBP15.58■□□□□ 0.08
TRIM3-215ENST00000639856 ARL4AP40617 200 aa15.58■□□□□ 0.08
TRIM3-215ENST00000639856 DAOAP59103 153 aa15.58■□□□□ 0.08
TRIM3-215ENST00000639856 YWHAHQ04917 246 aaPredicted RBP15.58■□□□□ 0.08
TRIM3-215ENST00000639856 RAB41Q5JT25 222 aa15.58■□□□□ 0.08
TRIM3-215ENST00000639856 HHATQ5VTY9 493 aa15.58■□□□□ 0.08
TRIM3-215ENST00000639856 LVRNQ6Q4G3 990 aa15.58■□□□□ 0.08
TRIM3-215ENST00000639856 VPS52Q8N1B4 723 aa15.58■□□□□ 0.08
TRIM3-215ENST00000639856 GBP7Q8N8V2 638 aaPredicted RBP15.58■□□□□ 0.08
TRIM3-215ENST00000639856 MCUQ8NE86 351 aa15.58■□□□□ 0.08
TRIM3-215ENST00000639856 NT5C3BQ969T7 300 aa15.58■□□□□ 0.08
TRIM3-215ENST00000639856 LRRC39Q96DD0 335 aa15.58■□□□□ 0.08
TRIM3-215ENST00000639856 QKIQ96PU8 341 aaKnown RBP eCLIP15.58■□□□□ 0.08
TRIM3-215ENST00000639856 SEZ6LQ9BYH1 1024 aa15.58■□□□□ 0.08
TRIM3-215ENST00000639856 TMPRSS4Q9NRS4 437 aa15.58■□□□□ 0.08
TRIM3-215ENST00000639856 DTLQ9NZJ0 730 aa15.58■□□□□ 0.08
TRIM3-215ENST00000639856 KLHL14Q9P2G3 628 aa15.58■□□□□ 0.08
TRIM3-215ENST00000639856 PCDHB8Q9UN66 801 aa15.58■□□□□ 0.08
TRIM3-215ENST00000639856 IQANK1A0A1B0GTG1 560 aa15.57■□□□□ 0.08
TRIM3-215ENST00000639856 TYMPP19971 482 aa15.57■□□□□ 0.08
TRIM3-215ENST00000639856 AMPD1P23109 780 aa15.57■□□□□ 0.08
TRIM3-215ENST00000639856 NOS2P35228 1153 aa15.57■□□□□ 0.08
TRIM3-215ENST00000639856 HEATR6Q6AI08 1181 aaKnown RBP15.57■□□□□ 0.08
TRIM3-215ENST00000639856 PYROXD2Q8N2H3 581 aa15.57■□□□□ 0.08
TRIM3-215ENST00000639856 BANPQ8N9N5 519 aa15.57■□□□□ 0.08
TRIM3-215ENST00000639856 SPOCK2Q92563 424 aa15.57■□□□□ 0.08
TRIM3-215ENST00000639856 SEPT8Q92599 483 aa15.57■□□□□ 0.08
TRIM3-215ENST00000639856 CASD1Q96PB1 797 aa15.57■□□□□ 0.08
TRIM3-215ENST00000639856 FAM193BQ96PV7 902 aaPredicted RBP15.57■□□□□ 0.08
TRIM3-215ENST00000639856 SLC2A13Q96QE2 648 aa15.57■□□□□ 0.08
TRIM3-215ENST00000639856 HIPK3Q9H422 1215 aa15.57■□□□□ 0.08
TRIM3-215ENST00000639856 POPDC2Q9HBU9 364 aa15.57■□□□□ 0.08
TRIM3-215ENST00000639856 CSNK1G1Q9HCP0 422 aa15.57■□□□□ 0.08
TRIM3-215ENST00000639856 HAUS2Q9NVX0 235 aa15.57■□□□□ 0.08
TRIM3-215ENST00000639856 KANSL3Q9P2N6 904 aa15.57■□□□□ 0.08
TRIM3-215ENST00000639856 PHTF1Q9UMS5 762 aa15.57■□□□□ 0.08
TRIM3-215ENST00000639856 PCDHB7Q9Y5E2 793 aa15.57■□□□□ 0.08
TRIM3-215ENST00000639856 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.56■□□□□ 0.08
TRIM3-215ENST00000639856 TM9SF1O15321 606 aa15.56■□□□□ 0.08
TRIM3-215ENST00000639856 UBOX5O94941 541 aa15.56■□□□□ 0.08
TRIM3-215ENST00000639856 METTL18O95568 372 aa15.56■□□□□ 0.08
TRIM3-215ENST00000639856 C1QAP02745 245 aa15.56■□□□□ 0.08
TRIM3-215ENST00000639856 INHBAP08476 426 aa15.56■□□□□ 0.08
TRIM3-215ENST00000639856 MAGEA3P43357 314 aa15.56■□□□□ 0.08
TRIM3-215ENST00000639856 TRIM60Q495X7 471 aa15.56■□□□□ 0.08
TRIM3-215ENST00000639856 GALNTL6Q49A17 601 aa15.56■□□□□ 0.08
TRIM3-215ENST00000639856 FAM133BQ5BKY9 247 aaKnown RBP15.56■□□□□ 0.08
TRIM3-215ENST00000639856 RNF43Q68DV7 783 aa15.56■□□□□ 0.08
TRIM3-215ENST00000639856 BHLHA9Q7RTU4 235 aa15.56■□□□□ 0.08
TRIM3-215ENST00000639856 BNIPLQ7Z465 357 aa15.56■□□□□ 0.08
TRIM3-215ENST00000639856 ABI1Q8IZP0 508 aa15.56■□□□□ 0.08
TRIM3-215ENST00000639856 THEM5Q8N1Q8 247 aa15.56■□□□□ 0.08
TRIM3-215ENST00000639856 ADAM32Q8TC27 787 aa15.56■□□□□ 0.08
TRIM3-215ENST00000639856 LRRC8CQ8TDW0 803 aa15.56■□□□□ 0.08
TRIM3-215ENST00000639856 DIS3LQ8TF46 1054 aaKnown RBP15.56■□□□□ 0.08
TRIM3-215ENST00000639856 OLFM3Q96PB7 478 aa15.56■□□□□ 0.08
TRIM3-215ENST00000639856 NPY6RQ99463 290 aa15.56■□□□□ 0.08
TRIM3-215ENST00000639856 PRDM16Q9HAZ2 1276 aa15.56■□□□□ 0.08
TRIM3-215ENST00000639856 ZC3H7BQ9UGR2 993 aaKnown RBP15.56■□□□□ 0.08
TRIM3-215ENST00000639856 GGT7Q9UJ14 662 aa15.56■□□□□ 0.08
TRIM3-215ENST00000639856 TTLL3Q9Y4R7 772 aa15.56■□□□□ 0.08
TRIM3-215ENST00000639856 PATJQ8NI35 1801 aa15.56■□□□□ 0.08
TRIM3-215ENST00000639856 TMEM189-UBE2V1I3L0A0 370 aa15.56■□□□□ 0.08
TRIM3-215ENST00000639856 FBXO21O94952 628 aa15.56■□□□□ 0.08
TRIM3-215ENST00000639856 TPSB2P20231 275 aa15.56■□□□□ 0.08
TRIM3-215ENST00000639856 CYP2C18P33260 490 aa15.56■□□□□ 0.08
TRIM3-215ENST00000639856 TSPY1Q01534 308 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms