RNA–Protein interactions for RNA: ENST00000639290.1

CCDC7-213, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,542 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-213ENST00000639290 ZSCAN5CA6NGD5 496 aaPredicted RBP3.72□□□□□ -1.81
CCDC7-213ENST00000639290 IDSB3KWA1 339 aa3.72□□□□□ -1.81
CCDC7-213ENST00000639290 D6RAR5 112 aa3.72□□□□□ -1.81
CCDC7-213ENST00000639290 K7EM74 188 aa3.72□□□□□ -1.81
CCDC7-213ENST00000639290 M0R2N6 131 aa3.72□□□□□ -1.81
CCDC7-213ENST00000639290 SH2B2O14492 632 aaPredicted RBP3.72□□□□□ -1.81
CCDC7-213ENST00000639290 ARHGEF9O43307 516 aa3.72□□□□□ -1.81
CCDC7-213ENST00000639290 ERLIN2O94905 339 aa3.72□□□□□ -1.81
CCDC7-213ENST00000639290 RTN3O95197 1032 aaPredicted RBP3.72□□□□□ -1.81
CCDC7-213ENST00000639290 IDSP22304 550 aa3.72□□□□□ -1.81
CCDC7-213ENST00000639290 MPSTP25325 297 aa3.72□□□□□ -1.81
CCDC7-213ENST00000639290 GNA15P30679 374 aa3.72□□□□□ -1.81
CCDC7-213ENST00000639290 IRX6P78412 446 aaPredicted RBP3.72□□□□□ -1.81
CCDC7-213ENST00000639290 DEFA6Q01524 100 aa3.72□□□□□ -1.81
CCDC7-213ENST00000639290 ZFP36L1Q07352 338 aaKnown RBP3.72□□□□□ -1.81
CCDC7-213ENST00000639290 ZNF177Q13360 481 aaPredicted RBP3.72□□□□□ -1.81
CCDC7-213ENST00000639290 SEMA5AQ13591 1074 aa3.72□□□□□ -1.81
CCDC7-213ENST00000639290 DRAP1Q14919 205 aaPredicted RBP3.72□□□□□ -1.81
CCDC7-213ENST00000639290 TSGA10IPQ3SY00 556 aa3.72□□□□□ -1.81
CCDC7-213ENST00000639290 ZNF394Q53GI3 561 aa3.72□□□□□ -1.81
CCDC7-213ENST00000639290 SLC6A19Q695T7 634 aa3.72□□□□□ -1.81
CCDC7-213ENST00000639290 PRSS57Q6UWY2 283 aa3.72□□□□□ -1.81
CCDC7-213ENST00000639290 NEK8Q86SG6 692 aa3.72□□□□□ -1.81
CCDC7-213ENST00000639290 TMPRSS6Q8IU80 811 aa3.72□□□□□ -1.81
CCDC7-213ENST00000639290 ERC1Q8IUD2 1116 aa3.72□□□□□ -1.81
CCDC7-213ENST00000639290 SLFN12Q8IYM2 578 aa3.72□□□□□ -1.81
CCDC7-213ENST00000639290 LRRC71Q8N4P6 559 aa3.72□□□□□ -1.81
CCDC7-213ENST00000639290 OR2T3Q8NH03 318 aa3.72□□□□□ -1.81
CCDC7-213ENST00000639290 CCDC136Q96JN2 1154 aa3.72□□□□□ -1.81
CCDC7-213ENST00000639290 MYRFLQ96LU7 910 aa3.72□□□□□ -1.81
CCDC7-213ENST00000639290 RANBP9Q96S59 729 aa3.72□□□□□ -1.81
CCDC7-213ENST00000639290 ASPSCR1Q9BZE9 553 aa3.72□□□□□ -1.81
CCDC7-213ENST00000639290 TRIM6Q9C030 488 aaPredicted RBP3.72□□□□□ -1.81
CCDC7-213ENST00000639290 AGO4Q9HCK5 861 aaKnown RBP3.72□□□□□ -1.81
CCDC7-213ENST00000639290 MRPL40Q9NQ50 206 aaKnown RBP3.72□□□□□ -1.81
CCDC7-213ENST00000639290 FOXJ2Q9P0K8 574 aa3.72□□□□□ -1.81
CCDC7-213ENST00000639290 TCEAL9Q9UHQ7 104 aa3.72□□□□□ -1.81
CCDC7-213ENST00000639290 HCN2Q9UL51 889 aa3.72□□□□□ -1.81
CCDC7-213ENST00000639290 ZGRF1Q86YA3 2104 aa3.72□□□□□ -1.81
CCDC7-213ENST00000639290 PMS2P1A4D2B8 440 aa3.72□□□□□ -1.81
CCDC7-213ENST00000639290 CASTOR2A6NHX0 329 aa3.72□□□□□ -1.81
CCDC7-213ENST00000639290 LRRC72A6NJI9 287 aa3.72□□□□□ -1.81
CCDC7-213ENST00000639290 E2F3O00716 465 aa3.72□□□□□ -1.81
CCDC7-213ENST00000639290 NKX2-8O15522 239 aa3.72□□□□□ -1.81
CCDC7-213ENST00000639290 B3GAT3O94766 335 aa3.72□□□□□ -1.81
CCDC7-213ENST00000639290 NOL4O94818 638 aa3.72□□□□□ -1.81
CCDC7-213ENST00000639290 CLDN14O95500 239 aa3.72□□□□□ -1.81
CCDC7-213ENST00000639290 ZFYP08048 801 aaPredicted RBP3.72□□□□□ -1.81
CCDC7-213ENST00000639290 CSH1P0DML2 217 aa3.72□□□□□ -1.81
CCDC7-213ENST00000639290 CSH2P0DML3 217 aa3.72□□□□□ -1.81
CCDC7-213ENST00000639290 PPP3CCP48454 512 aa3.72□□□□□ -1.81
CCDC7-213ENST00000639290 RAB15P59190 212 aa3.72□□□□□ -1.81
CCDC7-213ENST00000639290 SLC7A9P82251 487 aa3.72□□□□□ -1.81
CCDC7-213ENST00000639290 LINC01559Q495D7 138 aa3.72□□□□□ -1.81
CCDC7-213ENST00000639290 OXLD1Q5BKU9 147 aa3.72□□□□□ -1.81
CCDC7-213ENST00000639290 RNF20Q5VTR2 975 aa3.72□□□□□ -1.81
CCDC7-213ENST00000639290 KRTAP5-3Q6L8H2 238 aa3.72□□□□□ -1.81
CCDC7-213ENST00000639290 ALKBH2Q6NS38 261 aa3.72□□□□□ -1.81
CCDC7-213ENST00000639290 RHBDF2Q6PJF5 856 aa3.72□□□□□ -1.81
CCDC7-213ENST00000639290 TMPRSS9Q7Z410 1059 aa3.72□□□□□ -1.81
CCDC7-213ENST00000639290 APBB1IPQ7Z5R6 666 aaPredicted RBP3.72□□□□□ -1.81
CCDC7-213ENST00000639290 TECPR1Q7Z6L1 1165 aa3.72□□□□□ -1.81
CCDC7-213ENST00000639290 TMEM150AQ86TG1 271 aa3.72□□□□□ -1.81
CCDC7-213ENST00000639290 LRRC75A-AS1Q8N1F1 130 aa3.72□□□□□ -1.81
CCDC7-213ENST00000639290 MAB21L3Q8N8X9 362 aa3.72□□□□□ -1.81
CCDC7-213ENST00000639290 RDM1Q8NG50 284 aa3.72□□□□□ -1.81
CCDC7-213ENST00000639290 PLEKHO2Q8TD55 490 aa3.72□□□□□ -1.81
CCDC7-213ENST00000639290 UCMAQ8WVF2 138 aa3.72□□□□□ -1.81
CCDC7-213ENST00000639290 ARRDC3Q96B67 414 aa3.72□□□□□ -1.81
CCDC7-213ENST00000639290 FRMD6Q96NE9 622 aa3.72□□□□□ -1.81
CCDC7-213ENST00000639290 FAM129BQ96TA1 746 aa3.72□□□□□ -1.81
CCDC7-213ENST00000639290 PLEKHA5Q9HAU0 1116 aa3.72□□□□□ -1.81
CCDC7-213ENST00000639290 KCNH7Q9NS40 1196 aa3.72□□□□□ -1.81
CCDC7-213ENST00000639290 TBC1D22BQ9NU19 505 aa3.72□□□□□ -1.81
CCDC7-213ENST00000639290 MARK1Q9P0L2 795 aa3.72□□□□□ -1.81
CCDC7-213ENST00000639290 SUCLA2Q9P2R7 463 aaPredicted RBP3.72□□□□□ -1.81
CCDC7-213ENST00000639290 FZD4Q9ULV1 537 aa3.72□□□□□ -1.81
CCDC7-213ENST00000639290 STON1Q9Y6Q2 735 aa3.72□□□□□ -1.81
CCDC7-213ENST00000639290 DUX1O43812 170 aa3.71□□□□□ -1.82
CCDC7-213ENST00000639290 CREB3O43889 395 aa3.71□□□□□ -1.82
CCDC7-213ENST00000639290 TSPAN1O60635 241 aa3.71□□□□□ -1.82
CCDC7-213ENST00000639290 PIAS2O75928 621 aa3.71□□□□□ -1.82
CCDC7-213ENST00000639290 FSBPO95073 299 aa3.71□□□□□ -1.82
CCDC7-213ENST00000639290 GOSR1O95249 250 aa3.71□□□□□ -1.82
CCDC7-213ENST00000639290 VNN2O95498 520 aa3.71□□□□□ -1.82
CCDC7-213ENST00000639290 SNRPB2P08579 225 aaKnown RBP3.71□□□□□ -1.82
CCDC7-213ENST00000639290 IGFBP2P18065 325 aa3.71□□□□□ -1.82
CCDC7-213ENST00000639290 ATF4P18848 351 aaPredicted RBP3.71□□□□□ -1.82
CCDC7-213ENST00000639290 COPAP53621 1224 aa3.71□□□□□ -1.82
CCDC7-213ENST00000639290 PTENP60484 403 aa3.71□□□□□ -1.82
CCDC7-213ENST00000639290 KDSRQ06136 332 aa3.71□□□□□ -1.82
CCDC7-213ENST00000639290 ENOX2Q16206 610 aaKnown RBP3.71□□□□□ -1.82
CCDC7-213ENST00000639290 TAF12Q16514 161 aa3.71□□□□□ -1.82
CCDC7-213ENST00000639290 MEX3DQ86XN8 651 aaKnown RBP3.71□□□□□ -1.82
CCDC7-213ENST00000639290 HIPK1Q86Z02 1210 aa3.71□□□□□ -1.82
CCDC7-213ENST00000639290 FSIP1Q8NA03 581 aa3.71□□□□□ -1.82
CCDC7-213ENST00000639290 KBTBD3Q8NAB2 608 aa3.71□□□□□ -1.82
CCDC7-213ENST00000639290 ARMC2Q8NEN0 867 aa3.71□□□□□ -1.82
CCDC7-213ENST00000639290 OR2T34Q8NGX1 318 aa3.71□□□□□ -1.82
CCDC7-213ENST00000639290 LMX1AQ8TE12 382 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms