RNA–Protein interactions for RNA: ENST00000638567.1

SCARB2-210, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 4,415 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-210ENST00000638567 ATP6V1C1P21283 382 aa17.05■□□□□ 0.32
SCARB2-210ENST00000638567 PLK1P53350 603 aa17.05■□□□□ 0.32
SCARB2-210ENST00000638567 POU4F1Q01851 419 aa17.05■□□□□ 0.32
SCARB2-210ENST00000638567 PIGWQ7Z7B1 504 aa17.05■□□□□ 0.32
SCARB2-210ENST00000638567 DAW1Q8N136 415 aa17.05■□□□□ 0.32
SCARB2-210ENST00000638567 OR6Y1Q8NGX8 325 aa17.05■□□□□ 0.32
SCARB2-210ENST00000638567 RNPEPQ9H4A4 650 aa17.05■□□□□ 0.32
SCARB2-210ENST00000638567 WRAP73Q9P2S5 460 aaPredicted RBP17.05■□□□□ 0.32
SCARB2-210ENST00000638567 BLOC1S6Q9UL45 172 aa17.05■□□□□ 0.32
SCARB2-210ENST00000638567 RASSF9O75901 435 aa17.05■□□□□ 0.32
SCARB2-210ENST00000638567 COL1A1P02452 1464 aaPredicted RBP17.05■□□□□ 0.32
SCARB2-210ENST00000638567 RBP1P09455 135 aa17.05■□□□□ 0.32
SCARB2-210ENST00000638567 TSHRP16473 764 aa17.05■□□□□ 0.32
SCARB2-210ENST00000638567 ME2P23368 584 aa17.05■□□□□ 0.32
SCARB2-210ENST00000638567 CD151P48509 253 aa17.05■□□□□ 0.32
SCARB2-210ENST00000638567 CDK7P50613 346 aa17.05■□□□□ 0.32
SCARB2-210ENST00000638567 UBAP2LQ14157 1087 aaKnown RBP17.05■□□□□ 0.32
SCARB2-210ENST00000638567 GRIK4Q16099 956 aa17.05■□□□□ 0.32
SCARB2-210ENST00000638567 ZRANB3Q5FWF4 1079 aa17.05■□□□□ 0.32
SCARB2-210ENST00000638567 GLB1LQ6UWU2 654 aa17.05■□□□□ 0.32
SCARB2-210ENST00000638567 TMC7Q7Z402 723 aa17.05■□□□□ 0.32
SCARB2-210ENST00000638567 OR52K1Q8NGK4 314 aa17.05■□□□□ 0.32
SCARB2-210ENST00000638567 PIK3R5Q8WYR1 880 aa17.05■□□□□ 0.32
SCARB2-210ENST00000638567 EBNA1BP2Q99848 306 aaKnown RBP17.05■□□□□ 0.32
SCARB2-210ENST00000638567 ST6GALNAC4Q9H4F1 302 aa17.05■□□□□ 0.32
SCARB2-210ENST00000638567 C2CD2Q9Y426 696 aa17.05■□□□□ 0.32
SCARB2-210ENST00000638567 NCF1BA6NI72 391 aaPredicted RBP17.04■□□□□ 0.32
SCARB2-210ENST00000638567 NCF1CA8MVU1 366 aaPredicted RBP17.04■□□□□ 0.32
SCARB2-210ENST00000638567 MAFO75444 373 aaPredicted RBP17.04■□□□□ 0.32
SCARB2-210ENST00000638567 NCF1P14598 390 aaPredicted RBP17.04■□□□□ 0.32
SCARB2-210ENST00000638567 ZNF23P17027 643 aa17.04■□□□□ 0.32
SCARB2-210ENST00000638567 OR1G1P47890 313 aa17.04■□□□□ 0.32
SCARB2-210ENST00000638567 TMEM132BQ14DG7 1078 aa17.04■□□□□ 0.32
SCARB2-210ENST00000638567 PTRHD1Q6GMV3 140 aaKnown RBP17.04■□□□□ 0.32
SCARB2-210ENST00000638567 SLC27A1Q6PCB7 646 aa17.04■□□□□ 0.32
SCARB2-210ENST00000638567 KIAA0319LQ8IZA0 1049 aa17.04■□□□□ 0.32
SCARB2-210ENST00000638567 C12orf29Q8N999 325 aa17.04■□□□□ 0.32
SCARB2-210ENST00000638567 DDX50Q9BQ39 737 aaKnown RBP17.04■□□□□ 0.32
SCARB2-210ENST00000638567 MYH2Q9UKX2 1941 aa17.04■□□□□ 0.32
SCARB2-210ENST00000638567 C2orf71A6NGG8 1288 aa17.04■□□□□ 0.32
SCARB2-210ENST00000638567 SPATA31C2B4DYI2 1134 aa17.04■□□□□ 0.32
SCARB2-210ENST00000638567 R3HDM1Q15032 1099 aaKnown RBP17.04■□□□□ 0.32
SCARB2-210ENST00000638567 ZNF470Q6ECI4 717 aa17.04■□□□□ 0.32
SCARB2-210ENST00000638567 EFCAB3Q8N7B9 438 aa17.04■□□□□ 0.32
SCARB2-210ENST00000638567 HASPINQ8TF76 798 aa17.04■□□□□ 0.32
SCARB2-210ENST00000638567 SYT15Q9BQS2 421 aa17.04■□□□□ 0.32
SCARB2-210ENST00000638567 NMUR2Q9GZQ4 415 aa17.04■□□□□ 0.32
SCARB2-210ENST00000638567 NFASCO94856 1347 aa17.04■□□□□ 0.32
SCARB2-210ENST00000638567 SOAT2O75908 522 aa17.04■□□□□ 0.32
SCARB2-210ENST00000638567 MTA2O94776 668 aa17.04■□□□□ 0.32
SCARB2-210ENST00000638567 TOMM70O94826 608 aa17.04■□□□□ 0.32
SCARB2-210ENST00000638567 C4BPAP04003 597 aaKnown RBP17.04■□□□□ 0.32
SCARB2-210ENST00000638567 ODC1P11926 461 aa17.04■□□□□ 0.32
SCARB2-210ENST00000638567 CYP4X1Q8N118 509 aa17.04■□□□□ 0.32
SCARB2-210ENST00000638567 CPT1BQ92523 772 aa17.04■□□□□ 0.32
SCARB2-210ENST00000638567 NKD2Q969F2 451 aaPredicted RBP17.04■□□□□ 0.32
SCARB2-210ENST00000638567 ZNF333Q96JL9 665 aa17.04■□□□□ 0.32
SCARB2-210ENST00000638567 CPXM1Q96SM3 734 aa17.04■□□□□ 0.32
SCARB2-210ENST00000638567 ECSITQ9BQ95 431 aa17.04■□□□□ 0.32
SCARB2-210ENST00000638567 NT5MQ9NPB1 228 aa17.04■□□□□ 0.32
SCARB2-210ENST00000638567 MAN1C1Q9NR34 630 aa17.04■□□□□ 0.32
SCARB2-210ENST00000638567 TNFSF13BQ9Y275 285 aa17.04■□□□□ 0.32
SCARB2-210ENST00000638567 RIPK3Q9Y572 518 aa17.04■□□□□ 0.32
SCARB2-210ENST00000638567 HACD1B0YJ81 288 aa17.03■□□□□ 0.32
SCARB2-210ENST00000638567 PRPF4O43172 522 aaKnown RBP eCLIP17.03■□□□□ 0.32
SCARB2-210ENST00000638567 MGRN1O60291 552 aa17.03■□□□□ 0.32
SCARB2-210ENST00000638567 LRCH4O75427 683 aa17.03■□□□□ 0.32
SCARB2-210ENST00000638567 FAM58BPP0C7Q3 252 aa17.03■□□□□ 0.32
SCARB2-210ENST00000638567 MFSD14CQ5VZR4 134 aa17.03■□□□□ 0.32
SCARB2-210ENST00000638567 CYP2R1Q6VVX0 501 aa17.03■□□□□ 0.32
SCARB2-210ENST00000638567 DCP1BQ8IZD4 617 aaKnown RBP17.03■□□□□ 0.32
SCARB2-210ENST00000638567 NETO2Q8NC67 525 aa17.03■□□□□ 0.32
SCARB2-210ENST00000638567 ZSCAN18Q8TBC5 510 aaPredicted RBP17.03■□□□□ 0.32
SCARB2-210ENST00000638567 SLC16A10Q8TF71 515 aa17.03■□□□□ 0.32
SCARB2-210ENST00000638567 PARK7Q99497 189 aaKnown RBP17.03■□□□□ 0.32
SCARB2-210ENST00000638567 BEGAINQ9BUH8 593 aa17.03■□□□□ 0.32
SCARB2-210ENST00000638567 APOL5Q9BWW9 433 aa17.03■□□□□ 0.32
SCARB2-210ENST00000638567 HEATR9A2RTY3 570 aa17.03■□□□□ 0.32
SCARB2-210ENST00000638567 C5orf60A6NFR6 353 aa17.03■□□□□ 0.32
SCARB2-210ENST00000638567 SAC3D1A6NKF1 404 aa17.03■□□□□ 0.32
SCARB2-210ENST00000638567 TBC1D4O60343 1298 aa17.03■□□□□ 0.32
SCARB2-210ENST00000638567 RNF219Q5W0B1 726 aaPredicted RBP17.03■□□□□ 0.32
SCARB2-210ENST00000638567 GPR141Q7Z602 305 aa17.03■□□□□ 0.32
SCARB2-210ENST00000638567 THUMPD3Q9BV44 507 aaKnown RBP17.03■□□□□ 0.32
SCARB2-210ENST00000638567 PHACTR1Q9C0D0 580 aa17.03■□□□□ 0.32
SCARB2-210ENST00000638567 COPS7BQ9H9Q2 264 aaPredicted RBP17.03■□□□□ 0.32
SCARB2-210ENST00000638567 CCDC167Q9P0B6 97 aa17.03■□□□□ 0.32
SCARB2-210ENST00000638567 HES2Q9Y543 173 aa17.03■□□□□ 0.32
SCARB2-210ENST00000638567 ABCC6O95255 1503 aa17.03■□□□□ 0.32
SCARB2-210ENST00000638567 ZC3H4Q9UPT8 1303 aaKnown RBP17.03■□□□□ 0.32
SCARB2-210ENST00000638567 STRNO43815 780 aa17.03■□□□□ 0.32
SCARB2-210ENST00000638567 PLA2G6O60733 806 aa17.03■□□□□ 0.32
SCARB2-210ENST00000638567 ESRRBO95718 433 aa17.03■□□□□ 0.32
SCARB2-210ENST00000638567 ATP5BP06576 529 aaKnown RBP17.03■□□□□ 0.32
SCARB2-210ENST00000638567 YBX3P16989 372 aaKnown RBP eCLIP17.03■□□□□ 0.32
SCARB2-210ENST00000638567 MAPRE1Q15691 268 aaKnown RBP17.03■□□□□ 0.32
SCARB2-210ENST00000638567 UNC5AQ6ZN44 842 aa17.03■□□□□ 0.32
SCARB2-210ENST00000638567 LGMNQ99538 433 aa17.03■□□□□ 0.32
SCARB2-210ENST00000638567 TMEM79Q9BSE2 394 aa17.03■□□□□ 0.32
SCARB2-210ENST00000638567 C17orf80Q9BSJ5 609 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms