RNA–Protein interactions for RNA: ENST00000637848.1

EFR3A-208, Transcript of EFR3 homolog A, human

TSL 5 BASIC

Gene EFR3A, Length 2,547 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EFR3A-208	ENST00000637848	LIMD1	Q9UGP4	676 aa		4.24	□□□□□ -1.73
EFR3A-208	ENST00000637848	EVL	Q9UI08	416 aa	Predicted RBP	4.24	□□□□□ -1.73
EFR3A-208	ENST00000637848	SLC24A2	Q9UI40	661 aa		4.24	□□□□□ -1.73
EFR3A-208	ENST00000637848	STRIP2	Q9ULQ0	834 aa		4.24	□□□□□ -1.73
EFR3A-208	ENST00000637848	MAGED2	Q9UNF1	606 aa	Predicted RBP	4.24	□□□□□ -1.73
EFR3A-208	ENST00000637848	USH1C	Q9Y6N9	552 aa		4.24	□□□□□ -1.73
EFR3A-208	ENST00000637848	TTC3	P53804	2025 aa		4.23	□□□□□ -1.73
EFR3A-208	ENST00000637848	CFAP73	A6NFT4	308 aa		4.23	□□□□□ -1.73
EFR3A-208	ENST00000637848	TRIM49D1	C9J1S8	452 aa		4.23	□□□□□ -1.73
EFR3A-208	ENST00000637848	SPTLC1	O15269	473 aa		4.23	□□□□□ -1.73
EFR3A-208	ENST00000637848	MED7	O43513	233 aa		4.23	□□□□□ -1.73
EFR3A-208	ENST00000637848	PEX11A	O75192	247 aa		4.23	□□□□□ -1.73
EFR3A-208	ENST00000637848	CD1E	P15812	388 aa		4.23	□□□□□ -1.73
EFR3A-208	ENST00000637848	AMPD1	P23109	780 aa		4.23	□□□□□ -1.73
EFR3A-208	ENST00000637848	HOXD10	P28358	340 aa		4.23	□□□□□ -1.73
EFR3A-208	ENST00000637848	NEK3	P51956	506 aa		4.23	□□□□□ -1.73
EFR3A-208	ENST00000637848	TAP1	Q03518	808 aa		4.23	□□□□□ -1.73
EFR3A-208	ENST00000637848	KRT81	Q14533	505 aa		4.23	□□□□□ -1.73
EFR3A-208	ENST00000637848	TAF1C	Q15572	869 aa	Predicted RBP	4.23	□□□□□ -1.73
EFR3A-208	ENST00000637848	GRIK4	Q16099	956 aa		4.23	□□□□□ -1.73
EFR3A-208	ENST00000637848	FAM187B	Q17R55	369 aa		4.23	□□□□□ -1.73
EFR3A-208	ENST00000637848	PRAMEF19	Q5SWL8	479 aa		4.23	□□□□□ -1.73
EFR3A-208	ENST00000637848	MORN1	Q5T089	497 aa		4.23	□□□□□ -1.73
EFR3A-208	ENST00000637848	MROH9	Q5TGP6	573 aa		4.23	□□□□□ -1.73
EFR3A-208	ENST00000637848	MTHFD1L	Q6UB35	978 aa		4.23	□□□□□ -1.73
EFR3A-208	ENST00000637848	CLNK	Q7Z7G1	428 aa		4.23	□□□□□ -1.73
EFR3A-208	ENST00000637848	ARMC2	Q8NEN0	867 aa		4.23	□□□□□ -1.73
EFR3A-208	ENST00000637848	CCHCR1	Q8TD31	782 aa		4.23	□□□□□ -1.73
EFR3A-208	ENST00000637848	FNIP1	Q8TF40	1166 aa		4.23	□□□□□ -1.73
EFR3A-208	ENST00000637848	FRS2	Q8WU20	508 aa		4.23	□□□□□ -1.73
EFR3A-208	ENST00000637848	LGMN	Q99538	433 aa		4.23	□□□□□ -1.73
EFR3A-208	ENST00000637848	FAM167B	Q9BTA0	163 aa		4.23	□□□□□ -1.73
EFR3A-208	ENST00000637848	TMEM120A	Q9BXJ8	343 aa		4.23	□□□□□ -1.73
EFR3A-208	ENST00000637848	CADM1	Q9BY67	442 aa	Known RBP	4.23	□□□□□ -1.73
EFR3A-208	ENST00000637848	NXF3	Q9H4D5	531 aa	Known RBP	4.23	□□□□□ -1.73
EFR3A-208	ENST00000637848	POPDC2	Q9HBU9	364 aa		4.23	□□□□□ -1.73
EFR3A-208	ENST00000637848	SETD4	Q9NVD3	440 aa		4.23	□□□□□ -1.73
EFR3A-208	ENST00000637848	ASNSD1	Q9NWL6	643 aa		4.23	□□□□□ -1.73
EFR3A-208	ENST00000637848	MTMR10	Q9NXD2	777 aa		4.23	□□□□□ -1.73
EFR3A-208	ENST00000637848	FLRT1	Q9NZU1	646 aa		4.23	□□□□□ -1.73
EFR3A-208	ENST00000637848	ZFP69B	Q9UJL9	534 aa		4.23	□□□□□ -1.73
EFR3A-208	ENST00000637848	ACAD8	Q9UKU7	415 aa		4.23	□□□□□ -1.73
EFR3A-208	ENST00000637848	BARX2	Q9UMQ3	279 aa	Predicted RBP	4.23	□□□□□ -1.73
EFR3A-208	ENST00000637848	SMG5	Q9UPR3	1016 aa	Known RBP	4.23	□□□□□ -1.73
EFR3A-208	ENST00000637848	C15orf41	Q9Y2V0	281 aa		4.23	□□□□□ -1.73
EFR3A-208	ENST00000637848	THSD7B	Q9C0I4	1608 aa		4.23	□□□□□ -1.73
EFR3A-208	ENST00000637848	SCN10A	Q9Y5Y9	1956 aa		4.23	□□□□□ -1.73
EFR3A-208	ENST00000637848	FRMPD3	Q5JV73	1810 aa		4.23	□□□□□ -1.73
EFR3A-208	ENST00000637848	MANSC4	A6NHS7	340 aa	Predicted RBP	4.23	□□□□□ -1.73
EFR3A-208	ENST00000637848	CLDN5	O00501	218 aa		4.23	□□□□□ -1.73
EFR3A-208	ENST00000637848	PRPSAP2	O60256	369 aa		4.23	□□□□□ -1.73
EFR3A-208	ENST00000637848	LYPLA1	O75608	230 aa	Predicted RBP	4.23	□□□□□ -1.73
EFR3A-208	ENST00000637848	RFPL1	O75677	317 aa		4.23	□□□□□ -1.73
EFR3A-208	ENST00000637848	BEST1	O76090	585 aa		4.23	□□□□□ -1.73
EFR3A-208	ENST00000637848	F2	P00734	622 aa		4.23	□□□□□ -1.73
EFR3A-208	ENST00000637848	MT-ND3	P03897	115 aa		4.23	□□□□□ -1.73
EFR3A-208	ENST00000637848	SETSIP	P0DME0	302 aa		4.23	□□□□□ -1.73
EFR3A-208	ENST00000637848	EZR	P15311	586 aa	Known RBP	4.23	□□□□□ -1.73
EFR3A-208	ENST00000637848	VAV1	P15498	845 aa		4.23	□□□□□ -1.73
EFR3A-208	ENST00000637848	GOT1	P17174	413 aa		4.23	□□□□□ -1.73
EFR3A-208	ENST00000637848	TKT	P29401	623 aa	Known RBP	4.23	□□□□□ -1.73
EFR3A-208	ENST00000637848	HOXA11	P31270	313 aa	Predicted RBP	4.23	□□□□□ -1.73
EFR3A-208	ENST00000637848	ABCG1	P45844	678 aa		4.23	□□□□□ -1.73
EFR3A-208	ENST00000637848	NDUFV1	P49821	464 aa		4.23	□□□□□ -1.73
EFR3A-208	ENST00000637848	ZNF157	P51786	506 aa	Predicted RBP	4.23	□□□□□ -1.73
EFR3A-208	ENST00000637848	BCAR1	P56945	870 aa		4.23	□□□□□ -1.73
EFR3A-208	ENST00000637848	SESN3	P58005	492 aa		4.23	□□□□□ -1.73
EFR3A-208	ENST00000637848	FOXK1	P85037	733 aa		4.23	□□□□□ -1.73
EFR3A-208	ENST00000637848	ZNF200	P98182	395 aa	Predicted RBP	4.23	□□□□□ -1.73
EFR3A-208	ENST00000637848	TNFAIP2	Q03169	654 aa		4.23	□□□□□ -1.73
EFR3A-208	ENST00000637848	VAC14	Q08AM6	782 aa		4.23	□□□□□ -1.73
EFR3A-208	ENST00000637848	RIPK1	Q13546	671 aa		4.23	□□□□□ -1.73
EFR3A-208	ENST00000637848	LAPTM4A	Q15012	233 aa		4.23	□□□□□ -1.73
EFR3A-208	ENST00000637848	PRKD1	Q15139	912 aa	Predicted RBP	4.23	□□□□□ -1.73
EFR3A-208	ENST00000637848	SURF1	Q15526	300 aa		4.23	□□□□□ -1.73
EFR3A-208	ENST00000637848	DGKD	Q16760	1214 aa		4.23	□□□□□ -1.73
EFR3A-208	ENST00000637848	KHDC1	Q4VXA5	237 aa	Known RBP	4.23	□□□□□ -1.73
EFR3A-208	ENST00000637848	PKDCC	Q504Y2	493 aa		4.23	□□□□□ -1.73
EFR3A-208	ENST00000637848	BSPRY	Q5W0U4	402 aa		4.23	□□□□□ -1.73
EFR3A-208	ENST00000637848	OLFML2B	Q68BL8	750 aa		4.23	□□□□□ -1.73
EFR3A-208	ENST00000637848	IQSEC1	Q6DN90	963 aa		4.23	□□□□□ -1.73
EFR3A-208	ENST00000637848	LCLAT1	Q6UWP7	414 aa		4.23	□□□□□ -1.73
EFR3A-208	ENST00000637848	UNC5D	Q6UXZ4	953 aa		4.23	□□□□□ -1.73
EFR3A-208	ENST00000637848	UNC5A	Q6ZN44	842 aa		4.23	□□□□□ -1.73
EFR3A-208	ENST00000637848	RGS9BP	Q6ZS82	235 aa		4.23	□□□□□ -1.73
EFR3A-208	ENST00000637848	TLK2	Q86UE8	772 aa		4.23	□□□□□ -1.73
EFR3A-208	ENST00000637848	FAM131B	Q86XD5	332 aa		4.23	□□□□□ -1.73
EFR3A-208	ENST00000637848	TREML1	Q86YW5	311 aa		4.23	□□□□□ -1.73
EFR3A-208	ENST00000637848	HACE1	Q8IYU2	909 aa		4.23	□□□□□ -1.73
EFR3A-208	ENST00000637848	APPL2	Q8NEU8	664 aa		4.23	□□□□□ -1.73
EFR3A-208	ENST00000637848	OR6B3	Q8NGW1	331 aa		4.23	□□□□□ -1.73
EFR3A-208	ENST00000637848	GIMAP7	Q8NHV1	300 aa		4.23	□□□□□ -1.73
EFR3A-208	ENST00000637848	MAGEC3	Q8TD91	643 aa		4.23	□□□□□ -1.73
EFR3A-208	ENST00000637848	TRAF3IP1	Q8TDR0	691 aa	Predicted RBP	4.23	□□□□□ -1.73
EFR3A-208	ENST00000637848	WDR60	Q8WVS4	1066 aa		4.23	□□□□□ -1.73
EFR3A-208	ENST00000637848	TMEM40	Q8WWA1	233 aa		4.23	□□□□□ -1.73
EFR3A-208	ENST00000637848	SLC44A1	Q8WWI5	657 aa		4.23	□□□□□ -1.73
EFR3A-208	ENST00000637848	CLPTM1L	Q96KA5	538 aa		4.23	□□□□□ -1.73
EFR3A-208	ENST00000637848	SRPK1	Q96SB4	655 aa	Known RBP	4.23	□□□□□ -1.73
EFR3A-208	ENST00000637848	KCTD15	Q96SI1	283 aa	Predicted RBP	4.23	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms