RNA–Protein interactions for RNA: ENST00000637774.1

CACNA1A-248, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,381 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-248ENST00000637774 KITP10721 976 aa9.98□□□□□ -0.81
CACNA1A-248ENST00000637774 CKBP12277 381 aa9.98□□□□□ -0.81
CACNA1A-248ENST00000637774 GPR15P49685 360 aa9.98□□□□□ -0.81
CACNA1A-248ENST00000637774 RAB27AP51159 221 aa9.98□□□□□ -0.81
CACNA1A-248ENST00000637774 DPYSL2Q16555 572 aa9.98□□□□□ -0.81
CACNA1A-248ENST00000637774 NCBP2-AS2Q69YL0 99 aa9.98□□□□□ -0.81
CACNA1A-248ENST00000637774 MFSD5Q6N075 450 aa9.98□□□□□ -0.81
CACNA1A-248ENST00000637774 TRMT10BQ6PF06 316 aaKnown RBP9.98□□□□□ -0.81
CACNA1A-248ENST00000637774 TRABD2AQ86V40 505 aa9.98□□□□□ -0.81
CACNA1A-248ENST00000637774 ECHDC2Q86YB7 292 aa9.98□□□□□ -0.81
CACNA1A-248ENST00000637774 HOMEZQ8IX15 550 aa9.98□□□□□ -0.81
CACNA1A-248ENST00000637774 ZMIZ2Q8NF64 920 aa9.98□□□□□ -0.81
CACNA1A-248ENST00000637774 TEKT4Q8WW24 435 aa9.98□□□□□ -0.81
CACNA1A-248ENST00000637774 RSPH1Q8WYR4 309 aa9.98□□□□□ -0.81
CACNA1A-248ENST00000637774 UGT1A7Q9HAW7 530 aa9.98□□□□□ -0.81
CACNA1A-248ENST00000637774 UGT1A10Q9HAW8 530 aa9.98□□□□□ -0.81
CACNA1A-248ENST00000637774 UGT1A8Q9HAW9 530 aa9.98□□□□□ -0.81
CACNA1A-248ENST00000637774 PCDHB7Q9Y5E2 793 aa9.98□□□□□ -0.81
CACNA1A-248ENST00000637774 HTTP42858 3142 aa9.98□□□□□ -0.81
CACNA1A-248ENST00000637774 MYO9BQ13459 2157 aa9.97□□□□□ -0.81
CACNA1A-248ENST00000637774 TTC3P53804 2025 aa9.97□□□□□ -0.81
CACNA1A-248ENST00000637774 DAB1O75553 588 aa9.97□□□□□ -0.81
CACNA1A-248ENST00000637774 RPL9P32969 192 aaKnown RBP9.97□□□□□ -0.81
CACNA1A-248ENST00000637774 PTPN7P35236 360 aa9.97□□□□□ -0.81
CACNA1A-248ENST00000637774 TM4SF4P48230 202 aa9.97□□□□□ -0.81
CACNA1A-248ENST00000637774 PCSK7Q16549 785 aa9.97□□□□□ -0.81
CACNA1A-248ENST00000637774 NOMO2Q5JPE7 1267 aa9.97□□□□□ -0.81
CACNA1A-248ENST00000637774 CNGB3Q9NQW8 809 aa9.97□□□□□ -0.81
CACNA1A-248ENST00000637774 CREBZFQ9NS37 354 aa9.97□□□□□ -0.81
CACNA1A-248ENST00000637774 MPP6Q9NZW5 540 aa9.97□□□□□ -0.81
CACNA1A-248ENST00000637774 RABGEF1Q9UJ41 708 aa9.97□□□□□ -0.81
CACNA1A-248ENST00000637774 FZD10Q9ULW2 581 aa9.97□□□□□ -0.81
CACNA1A-248ENST00000637774 RPS6KL1Q9Y6S9 549 aa9.97□□□□□ -0.81
CACNA1A-248ENST00000637774 DPYSL4O14531 572 aa9.97□□□□□ -0.81
CACNA1A-248ENST00000637774 FBXO21O94952 628 aa9.97□□□□□ -0.81
CACNA1A-248ENST00000637774 SLC5A3P53794 718 aa9.97□□□□□ -0.81
CACNA1A-248ENST00000637774 GRIK3Q13003 919 aa9.97□□□□□ -0.81
CACNA1A-248ENST00000637774 SEPT6Q14141 434 aa9.97□□□□□ -0.81
CACNA1A-248ENST00000637774 SLC1A5Q15758 541 aa9.97□□□□□ -0.81
CACNA1A-248ENST00000637774 INTS6LQ5JSJ4 861 aaKnown RBP9.97□□□□□ -0.81
CACNA1A-248ENST00000637774 ZNF449Q6P9G9 518 aa9.97□□□□□ -0.81
CACNA1A-248ENST00000637774 TAC4Q86UU9 113 aa9.97□□□□□ -0.81
CACNA1A-248ENST00000637774 GIPC2Q8TF65 315 aa9.97□□□□□ -0.81
CACNA1A-248ENST00000637774 ATXN2LQ8WWM7 1075 aaKnown RBP9.97□□□□□ -0.81
CACNA1A-248ENST00000637774 PABPC5Q96DU9 382 aaKnown RBP9.97□□□□□ -0.81
CACNA1A-248ENST00000637774 STAMBPL1Q96FJ0 436 aa9.97□□□□□ -0.81
CACNA1A-248ENST00000637774 DEFB118Q96PH6 123 aa9.97□□□□□ -0.81
CACNA1A-248ENST00000637774 BEGAINQ9BUH8 593 aa9.97□□□□□ -0.81
CACNA1A-248ENST00000637774 MARCOQ9UEW3 520 aaPredicted RBP9.97□□□□□ -0.81
CACNA1A-248ENST00000637774 FARP1Q9Y4F1 1045 aaPredicted RBP9.97□□□□□ -0.81
CACNA1A-248ENST00000637774 PMPCBO75439 489 aa9.97□□□□□ -0.81
CACNA1A-248ENST00000637774 DDHD2O94830 711 aa9.97□□□□□ -0.81
CACNA1A-248ENST00000637774 LRIG2O94898 1065 aa9.97□□□□□ -0.81
CACNA1A-248ENST00000637774 TBX18O95935 607 aa9.97□□□□□ -0.81
CACNA1A-248ENST00000637774 SLC4A1P02730 911 aa9.97□□□□□ -0.81
CACNA1A-248ENST00000637774 GTF2A1P52655 376 aaPredicted RBP9.97□□□□□ -0.81
CACNA1A-248ENST00000637774 CORO7P57737 925 aa9.97□□□□□ -0.81
CACNA1A-248ENST00000637774 TTC31Q49AM3 519 aaPredicted RBP9.97□□□□□ -0.81
CACNA1A-248ENST00000637774 C4orf50Q6ZRC1 276 aa9.97□□□□□ -0.81
CACNA1A-248ENST00000637774 SLC24A5Q71RS6 500 aa9.97□□□□□ -0.81
CACNA1A-248ENST00000637774 SPATA21Q7Z572 469 aa9.97□□□□□ -0.81
CACNA1A-248ENST00000637774 TBC1D1Q86TI0 1168 aaPredicted RBP9.97□□□□□ -0.81
CACNA1A-248ENST00000637774 IPMKQ8NFU5 416 aa9.97□□□□□ -0.81
CACNA1A-248ENST00000637774 OR52K1Q8NGK4 314 aa9.97□□□□□ -0.81
CACNA1A-248ENST00000637774 PPM1EQ8WY54 764 aa9.97□□□□□ -0.81
CACNA1A-248ENST00000637774 BHMTQ93088 406 aa9.97□□□□□ -0.81
CACNA1A-248ENST00000637774 ZNF669Q96BR6 464 aaPredicted RBP9.97□□□□□ -0.81
CACNA1A-248ENST00000637774 VPS11Q9H270 941 aa9.97□□□□□ -0.81
CACNA1A-248ENST00000637774 NPHS2Q9NP85 383 aa9.97□□□□□ -0.81
CACNA1A-248ENST00000637774 UBN1Q9NPG3 1134 aa9.97□□□□□ -0.81
CACNA1A-248ENST00000637774 FNDC3AQ9Y2H6 1198 aaKnown RBP9.97□□□□□ -0.81
CACNA1A-248ENST00000637774 PLXNA1Q9UIW2 1896 aa9.96□□□□□ -0.81
CACNA1A-248ENST00000637774 TBKBP1A7MCY6 615 aa9.96□□□□□ -0.81
CACNA1A-248ENST00000637774 VAV1P15498 845 aa9.96□□□□□ -0.81
CACNA1A-248ENST00000637774 SETDB1Q15047 1291 aa9.96□□□□□ -0.81
CACNA1A-248ENST00000637774 NDUFAF2Q8N183 169 aa9.96□□□□□ -0.81
CACNA1A-248ENST00000637774 ARMC2Q8NEN0 867 aa9.96□□□□□ -0.81
CACNA1A-248ENST00000637774 DQX1Q8TE96 717 aaKnown RBP9.96□□□□□ -0.81
CACNA1A-248ENST00000637774 CDKL2Q92772 493 aa9.96□□□□□ -0.81
CACNA1A-248ENST00000637774 NPY6RQ99463 290 aa9.96□□□□□ -0.81
CACNA1A-248ENST00000637774 TMEM109Q9BVC6 243 aa9.96□□□□□ -0.81
CACNA1A-248ENST00000637774 RNF208Q9H0X6 261 aa9.96□□□□□ -0.81
CACNA1A-248ENST00000637774 ACSS3Q9H6R3 686 aa9.96□□□□□ -0.81
CACNA1A-248ENST00000637774 SMYD2Q9NRG4 433 aa9.96□□□□□ -0.81
CACNA1A-248ENST00000637774 MTMR10Q9NXD2 777 aa9.96□□□□□ -0.81
CACNA1A-248ENST00000637774 ZFATQ9P243 1243 aa9.96□□□□□ -0.81
CACNA1A-248ENST00000637774 SLC17A7Q9P2U7 560 aa9.96□□□□□ -0.81
CACNA1A-248ENST00000637774 VANGL2Q9ULK5 521 aa9.96□□□□□ -0.81
CACNA1A-248ENST00000637774 LAMA2P24043 3122 aaKnown RBP9.96□□□□□ -0.81
CACNA1A-248ENST00000637774 NUP205Q92621 2012 aa9.96□□□□□ -0.82
CACNA1A-248ENST00000637774 A0A0A0MRY4 1105 aa9.96□□□□□ -0.82
CACNA1A-248ENST00000637774 CXorf49A8MYA2 514 aaPredicted RBP9.96□□□□□ -0.82
CACNA1A-248ENST00000637774 CHADO15335 359 aa9.96□□□□□ -0.82
CACNA1A-248ENST00000637774 NR2C2P49116 596 aa9.96□□□□□ -0.82
CACNA1A-248ENST00000637774 WDR4P57081 412 aaKnown RBP9.96□□□□□ -0.82
CACNA1A-248ENST00000637774 NR1H3Q13133 447 aa9.96□□□□□ -0.82
CACNA1A-248ENST00000637774 C10orf120Q5SQS8 335 aa9.96□□□□□ -0.82
CACNA1A-248ENST00000637774 SLC9A4Q6AI14 798 aa9.96□□□□□ -0.82
CACNA1A-248ENST00000637774 SPATA13Q96N96 652 aa9.96□□□□□ -0.82
CACNA1A-248ENST00000637774 ABCF3Q9NUQ8 709 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms