RNA–Protein interactions for RNA: ENST00000637572.1

CHD2-227, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 4,452 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-227ENST00000637572 GOLGA8MH3BSY2 632 aa5.68□□□□□ -1.5
CHD2-227ENST00000637572 SH3BP5O60239 455 aa5.68□□□□□ -1.5
CHD2-227ENST00000637572 SNX2O60749 519 aa5.68□□□□□ -1.5
CHD2-227ENST00000637572 NOL4O94818 638 aa5.68□□□□□ -1.5
CHD2-227ENST00000637572 SEC31AO94979 1220 aaKnown RBP5.68□□□□□ -1.5
CHD2-227ENST00000637572 CRTAMO95727 393 aa5.68□□□□□ -1.5
CHD2-227ENST00000637572 KDELR1P24390 212 aa5.68□□□□□ -1.5
CHD2-227ENST00000637572 TYK2P29597 1187 aa5.68□□□□□ -1.5
CHD2-227ENST00000637572 LRPAP1P30533 357 aa5.68□□□□□ -1.5
CHD2-227ENST00000637572 PTPN9P43378 593 aa5.68□□□□□ -1.5
CHD2-227ENST00000637572 TUBP50607 506 aa5.68□□□□□ -1.5
CHD2-227ENST00000637572 ITGA8P53708 1063 aa5.68□□□□□ -1.5
CHD2-227ENST00000637572 SESN2P58004 480 aaPredicted RBP5.68□□□□□ -1.5
CHD2-227ENST00000637572 VSNL1P62760 191 aa5.68□□□□□ -1.5
CHD2-227ENST00000637572 TRADDQ15628 312 aa5.68□□□□□ -1.5
CHD2-227ENST00000637572 KCNT1Q5JUK3 1230 aa5.68□□□□□ -1.5
CHD2-227ENST00000637572 VARS2Q5ST30 1063 aaKnown RBP5.68□□□□□ -1.5
CHD2-227ENST00000637572 PPP1R26Q5T8A7 1209 aaPredicted RBP5.68□□□□□ -1.5
CHD2-227ENST00000637572 AGBL2Q5U5Z8 902 aa5.68□□□□□ -1.5
CHD2-227ENST00000637572 FBXW10Q5XX13 1052 aa5.68□□□□□ -1.5
CHD2-227ENST00000637572 MRNIPQ6NTE8 343 aa5.68□□□□□ -1.5
CHD2-227ENST00000637572 GPR153Q6NV75 609 aa5.68□□□□□ -1.5
CHD2-227ENST00000637572 FRA10AC1Q70Z53 315 aa5.68□□□□□ -1.5
CHD2-227ENST00000637572 DSG4Q86SJ6 1040 aa5.68□□□□□ -1.5
CHD2-227ENST00000637572 GBP7Q8N8V2 638 aaPredicted RBP5.68□□□□□ -1.5
CHD2-227ENST00000637572 CCDC197Q8NCU1 140 aa5.68□□□□□ -1.5
CHD2-227ENST00000637572 TMEM174Q8WUU8 243 aa5.68□□□□□ -1.5
CHD2-227ENST00000637572 MCUR1Q96AQ8 359 aa5.68□□□□□ -1.5
CHD2-227ENST00000637572 GRAMD1AQ96CP6 724 aa5.68□□□□□ -1.5
CHD2-227ENST00000637572 HDAC11Q96DB2 347 aa5.68□□□□□ -1.5
CHD2-227ENST00000637572 STAMBPL1Q96FJ0 436 aa5.68□□□□□ -1.5
CHD2-227ENST00000637572 SUSD3Q96L08 255 aa5.68□□□□□ -1.5
CHD2-227ENST00000637572 ATP6V1G3Q96LB4 118 aa5.68□□□□□ -1.5
CHD2-227ENST00000637572 MRPL45Q9BRJ2 306 aaKnown RBP5.68□□□□□ -1.5
CHD2-227ENST00000637572 C2orf49Q9BVC5 232 aaPredicted RBP5.68□□□□□ -1.5
CHD2-227ENST00000637572 CACYBPQ9HB71 228 aaKnown RBP5.68□□□□□ -1.5
CHD2-227ENST00000637572 VPS28Q9UK41 221 aa5.68□□□□□ -1.5
CHD2-227ENST00000637572 PLA2G4CQ9UP65 541 aa5.68□□□□□ -1.5
CHD2-227ENST00000637572 BRWD3Q6RI45 1802 aa5.68□□□□□ -1.5
CHD2-227ENST00000637572 TAF1LQ8IZX4 1826 aa5.68□□□□□ -1.5
CHD2-227ENST00000637572 RGPD3A6NKT7 1758 aaPredicted RBP5.68□□□□□ -1.5
CHD2-227ENST00000637572 RGPD4Q7Z3J3 1758 aa5.68□□□□□ -1.5
CHD2-227ENST00000637572 ESYT3A0FGR9 886 aa5.68□□□□□ -1.5
CHD2-227ENST00000637572 CXCL14O95715 111 aa5.68□□□□□ -1.5
CHD2-227ENST00000637572 CST3P01034 146 aaPredicted RBP5.68□□□□□ -1.5
CHD2-227ENST00000637572 CYP1A1P04798 512 aaPredicted RBP5.68□□□□□ -1.5
CHD2-227ENST00000637572 SERPINF2P08697 491 aa5.68□□□□□ -1.5
CHD2-227ENST00000637572 DDX5P17844 614 aaKnown RBP5.68□□□□□ -1.5
CHD2-227ENST00000637572 SLCO1A2P46721 670 aa5.68□□□□□ -1.5
CHD2-227ENST00000637572 SCTRP47872 440 aa5.68□□□□□ -1.5
CHD2-227ENST00000637572 RAD23BP54727 409 aa5.68□□□□□ -1.5
CHD2-227ENST00000637572 XRCC4Q13426 336 aa5.68□□□□□ -1.5
CHD2-227ENST00000637572 OCLNQ16625 522 aa5.68□□□□□ -1.5
CHD2-227ENST00000637572 TTC39BQ5VTQ0 682 aaPredicted RBP5.68□□□□□ -1.5
CHD2-227ENST00000637572 KCTD16Q68DU8 428 aa5.68□□□□□ -1.5
CHD2-227ENST00000637572 UGT3A1Q6NUS8 523 aa5.68□□□□□ -1.5
CHD2-227ENST00000637572 CRLF3Q8IUI8 442 aa5.68□□□□□ -1.5
CHD2-227ENST00000637572 MAFAQ8NHW3 353 aaPredicted RBP5.68□□□□□ -1.5
CHD2-227ENST00000637572 BCAS4Q8TDM0 211 aa5.68□□□□□ -1.5
CHD2-227ENST00000637572 PTPRN2Q92932 1015 aa5.68□□□□□ -1.5
CHD2-227ENST00000637572 MTBPQ96DY7 904 aa5.68□□□□□ -1.5
CHD2-227ENST00000637572 SGSM3Q96HU1 749 aa5.68□□□□□ -1.5
CHD2-227ENST00000637572 BTBD6Q96KE9 485 aa5.68□□□□□ -1.5
CHD2-227ENST00000637572 PGLYRP2Q96PD5 576 aa5.68□□□□□ -1.5
CHD2-227ENST00000637572 TKTL2Q9H0I9 626 aa5.68□□□□□ -1.5
CHD2-227ENST00000637572 UPF3AQ9H1J1 476 aaKnown RBP5.68□□□□□ -1.5
CHD2-227ENST00000637572 PDLIM7Q9NR12 457 aa5.68□□□□□ -1.5
CHD2-227ENST00000637572 TBC1D14Q9P2M4 693 aa5.68□□□□□ -1.5
CHD2-227ENST00000637572 TBK1Q9UHD2 729 aa5.68□□□□□ -1.5
CHD2-227ENST00000637572 MAFFQ9ULX9 164 aa5.68□□□□□ -1.5
CHD2-227ENST00000637572 MRPL42Q9Y6G3 142 aaKnown RBP5.68□□□□□ -1.5
CHD2-227ENST00000637572 EIF4E1BA6NMX2 242 aaKnown RBP5.68□□□□□ -1.5
CHD2-227ENST00000637572 NDUFS3O75489 264 aa5.68□□□□□ -1.5
CHD2-227ENST00000637572 ATP5BP06576 529 aaKnown RBP5.68□□□□□ -1.5
CHD2-227ENST00000637572 APOA4P06727 396 aa5.68□□□□□ -1.5
CHD2-227ENST00000637572 SNRPAP09012 282 aaKnown RBP5.68□□□□□ -1.5
CHD2-227ENST00000637572 ATP4AP20648 1035 aa5.68□□□□□ -1.5
CHD2-227ENST00000637572 RFC1P35251 1148 aaPredicted RBP5.68□□□□□ -1.5
CHD2-227ENST00000637572 NPY2RP49146 381 aa5.68□□□□□ -1.5
CHD2-227ENST00000637572 RGS4P49798 205 aa5.68□□□□□ -1.5
CHD2-227ENST00000637572 PPP2R2AP63151 447 aa5.68□□□□□ -1.5
CHD2-227ENST00000637572 TWF1Q12792 350 aa5.68□□□□□ -1.5
CHD2-227ENST00000637572 USP4Q13107 963 aa5.68□□□□□ -1.5
CHD2-227ENST00000637572 HGSNATQ68CP4 663 aa5.68□□□□□ -1.5
CHD2-227ENST00000637572 BBS12Q6ZW61 710 aa5.68□□□□□ -1.5
CHD2-227ENST00000637572 HJURPQ8NCD3 748 aaPredicted RBP5.68□□□□□ -1.5
CHD2-227ENST00000637572 HTR3CQ8WXA8 447 aa5.68□□□□□ -1.5
CHD2-227ENST00000637572 EDEM1Q92611 657 aa5.68□□□□□ -1.5
CHD2-227ENST00000637572 ARHGEF2Q92974 986 aaKnown RBP5.68□□□□□ -1.5
CHD2-227ENST00000637572 STMN2Q93045 179 aa5.68□□□□□ -1.5
CHD2-227ENST00000637572 ZFP42Q96MM3 310 aa5.68□□□□□ -1.5
CHD2-227ENST00000637572 PTPN18Q99952 460 aa5.68□□□□□ -1.5
CHD2-227ENST00000637572 TRIM51Q9BSJ1 452 aa5.68□□□□□ -1.5
CHD2-227ENST00000637572 FAM167BQ9BTA0 163 aa5.68□□□□□ -1.5
CHD2-227ENST00000637572 GPR88Q9GZN0 384 aa5.68□□□□□ -1.5
CHD2-227ENST00000637572 PABPC3Q9H361 631 aaKnown RBP5.68□□□□□ -1.5
CHD2-227ENST00000637572 PNPLA8Q9NP80 782 aa5.68□□□□□ -1.5
CHD2-227ENST00000637572 SMYD2Q9NRG4 433 aa5.68□□□□□ -1.5
CHD2-227ENST00000637572 DNPEPQ9ULA0 475 aa5.68□□□□□ -1.5
CHD2-227ENST00000637572 ADGRA3Q8IWK6 1321 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms