RNA–Protein interactions for RNA: ENST00000637117.1

CACNA1A-236, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,124 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-236ENST00000637117 PTPRBP23467 1997 aa9.69□□□□□ -0.86
CACNA1A-236ENST00000637117 TNNC1P63316 161 aa9.69□□□□□ -0.86
CACNA1A-236ENST00000637117 SFSWAPQ12872 951 aaKnown RBP9.69□□□□□ -0.86
CACNA1A-236ENST00000637117 LARP1BQ659C4 914 aaKnown RBP9.69□□□□□ -0.86
CACNA1A-236ENST00000637117 DBX2Q6ZNG2 339 aa9.69□□□□□ -0.86
CACNA1A-236ENST00000637117 TPGS1Q6ZTW0 290 aa9.69□□□□□ -0.86
CACNA1A-236ENST00000637117 CADM4Q8NFZ8 388 aa9.69□□□□□ -0.86
CACNA1A-236ENST00000637117 TOE1Q96GM8 510 aaKnown RBP9.69□□□□□ -0.86
CACNA1A-236ENST00000637117 MED10Q9BTT4 135 aa9.69□□□□□ -0.86
CACNA1A-236ENST00000637117 BBS2Q9BXC9 721 aa9.69□□□□□ -0.86
CACNA1A-236ENST00000637117 TGIF2Q9GZN2 237 aa9.69□□□□□ -0.86
CACNA1A-236ENST00000637117 NUCKS1Q9H1E3 243 aaKnown RBP9.69□□□□□ -0.86
CACNA1A-236ENST00000637117 MIR1-1HGQ9H1L0 117 aa9.69□□□□□ -0.86
CACNA1A-236ENST00000637117 GAREM1Q9H706 876 aa9.69□□□□□ -0.86
CACNA1A-236ENST00000637117 IL21RQ9HBE5 538 aa9.69□□□□□ -0.86
CACNA1A-236ENST00000637117 KIAA1586Q9HCI6 787 aa9.69□□□□□ -0.86
CACNA1A-236ENST00000637117 ITM2CQ9NQX7 267 aa9.69□□□□□ -0.86
CACNA1A-236ENST00000637117 TM7SF3Q9NS93 570 aa9.69□□□□□ -0.86
CACNA1A-236ENST00000637117 COMMD8Q9NX08 183 aa9.69□□□□□ -0.86
CACNA1A-236ENST00000637117 CACNA2D2Q9NY47 1150 aa9.69□□□□□ -0.86
CACNA1A-236ENST00000637117 CELSR3Q9NYQ7 3312 aa9.69□□□□□ -0.86
CACNA1A-236ENST00000637117 WSB2Q9NYS7 404 aaPredicted RBP9.69□□□□□ -0.86
CACNA1A-236ENST00000637117 HSPBP1Q9NZL4 362 aa9.69□□□□□ -0.86
CACNA1A-236ENST00000637117 GMIPQ9P107 970 aa9.69□□□□□ -0.86
CACNA1A-236ENST00000637117 DKK4Q9UBT3 224 aa9.69□□□□□ -0.86
CACNA1A-236ENST00000637117 FAM8A1Q9UBU6 413 aa9.69□□□□□ -0.86
CACNA1A-236ENST00000637117 NFE2L3Q9Y4A8 694 aa9.69□□□□□ -0.86
CACNA1A-236ENST00000637117 KNL1Q8NG31 2342 aa9.68□□□□□ -0.86
CACNA1A-236ENST00000637117 ATP8B3O60423 1300 aa9.68□□□□□ -0.86
CACNA1A-236ENST00000637117 FAM92AA1XBS5 289 aa9.68□□□□□ -0.86
CACNA1A-236ENST00000637117 TRABD2BA6NFA1 517 aa9.68□□□□□ -0.86
CACNA1A-236ENST00000637117 METTL12A8MUP2 240 aa9.68□□□□□ -0.86
CACNA1A-236ENST00000637117 MEI4A8MW99 385 aa9.68□□□□□ -0.86
CACNA1A-236ENST00000637117 GREM1O60565 184 aa9.68□□□□□ -0.86
CACNA1A-236ENST00000637117 CILPO75339 1184 aa9.68□□□□□ -0.86
CACNA1A-236ENST00000637117 CER1O95813 267 aa9.68□□□□□ -0.86
CACNA1A-236ENST00000637117 TBX18O95935 607 aa9.68□□□□□ -0.86
CACNA1A-236ENST00000637117 ATXN1LP0C7T5 689 aaKnown RBP9.68□□□□□ -0.86
CACNA1A-236ENST00000637117 ZNF883P0CG24 379 aa9.68□□□□□ -0.86
CACNA1A-236ENST00000637117 DLATP10515 647 aaKnown RBP9.68□□□□□ -0.86
CACNA1A-236ENST00000637117 NCAM1P13591 858 aa9.68□□□□□ -0.86
CACNA1A-236ENST00000637117 MATKP42679 507 aa9.68□□□□□ -0.86
CACNA1A-236ENST00000637117 DGKGP49619 791 aa9.68□□□□□ -0.86
CACNA1A-236ENST00000637117 PGFP49763 221 aa9.68□□□□□ -0.86
CACNA1A-236ENST00000637117 SLC5A3P53794 718 aa9.68□□□□□ -0.86
CACNA1A-236ENST00000637117 MYL6P60660 151 aa9.68□□□□□ -0.86
CACNA1A-236ENST00000637117 PTSQ03393 145 aa9.68□□□□□ -0.86
CACNA1A-236ENST00000637117 CYP4F3Q08477 520 aa9.68□□□□□ -0.86
CACNA1A-236ENST00000637117 DCAF12L1Q5VU92 463 aa9.68□□□□□ -0.86
CACNA1A-236ENST00000637117 IL27RAQ6UWB1 636 aa9.68□□□□□ -0.86
CACNA1A-236ENST00000637117 NXPE4Q6UWF7 544 aa9.68□□□□□ -0.86
CACNA1A-236ENST00000637117 PAQR9Q6ZVX9 377 aa9.68□□□□□ -0.86
CACNA1A-236ENST00000637117 BRAPQ7Z569 592 aa9.68□□□□□ -0.86
CACNA1A-236ENST00000637117 MARCH9Q86YJ5 346 aa9.68□□□□□ -0.86
CACNA1A-236ENST00000637117 ZCCHC9Q8N567 271 aaKnown RBP9.68□□□□□ -0.86
CACNA1A-236ENST00000637117 PMEPA1Q969W9 287 aa9.68□□□□□ -0.86
CACNA1A-236ENST00000637117 TMX3Q96JJ7 454 aa9.68□□□□□ -0.86
CACNA1A-236ENST00000637117 CLIC6Q96NY7 704 aa9.68□□□□□ -0.86
CACNA1A-236ENST00000637117 CDC6Q99741 560 aa9.68□□□□□ -0.86
CACNA1A-236ENST00000637117 GPR174Q9BXC1 333 aa9.68□□□□□ -0.86
CACNA1A-236ENST00000637117 PANK2Q9BZ23 570 aa9.68□□□□□ -0.86
CACNA1A-236ENST00000637117 PRDM16Q9HAZ2 1276 aa9.68□□□□□ -0.86
CACNA1A-236ENST00000637117 MARK1Q9P0L2 795 aa9.68□□□□□ -0.86
CACNA1A-236ENST00000637117 NXF1Q9UBU9 619 aaKnown RBP9.68□□□□□ -0.86
CACNA1A-236ENST00000637117 SMC3Q9UQE7 1217 aa9.68□□□□□ -0.86
CACNA1A-236ENST00000637117 PCDHGC4Q9Y5F7 938 aa9.68□□□□□ -0.86
CACNA1A-236ENST00000637117 SRPRBQ9Y5M8 271 aaKnown RBP9.68□□□□□ -0.86
CACNA1A-236ENST00000637117 CLIC4Q9Y696 253 aa9.68□□□□□ -0.86
CACNA1A-236ENST00000637117 STON1Q9Y6Q2 735 aa9.68□□□□□ -0.86
CACNA1A-236ENST00000637117 KNTC1P50748 2209 aa9.68□□□□□ -0.86
CACNA1A-236ENST00000637117 CABIN1Q9Y6J0 2220 aa9.68□□□□□ -0.86
CACNA1A-236ENST00000637117 IGSF10Q6WRI0 2623 aa9.67□□□□□ -0.86
CACNA1A-236ENST00000637117 KCNJ18B7U540 433 aa9.67□□□□□ -0.86
CACNA1A-236ENST00000637117 BCAT2O15382 392 aaPredicted RBP9.67□□□□□ -0.86
CACNA1A-236ENST00000637117 TLR5O60602 858 aa9.67□□□□□ -0.86
CACNA1A-236ENST00000637117 OXTRP30559 389 aa9.67□□□□□ -0.86
CACNA1A-236ENST00000637117 ATP5C1P36542 298 aaKnown RBP9.67□□□□□ -0.86
CACNA1A-236ENST00000637117 CDH8P55286 799 aa9.67□□□□□ -0.86
CACNA1A-236ENST00000637117 BNC1Q01954 994 aa9.67□□□□□ -0.86
CACNA1A-236ENST00000637117 TRPC3Q13507 836 aa9.67□□□□□ -0.86
CACNA1A-236ENST00000637117 STARD3Q14849 445 aa9.67□□□□□ -0.86
CACNA1A-236ENST00000637117 PSMD6Q15008 389 aa9.67□□□□□ -0.86
CACNA1A-236ENST00000637117 SUZ12Q15022 739 aaKnown RBP9.67□□□□□ -0.86
CACNA1A-236ENST00000637117 HLA-BQ31612 363 aa9.67□□□□□ -0.86
CACNA1A-236ENST00000637117 FUT11Q495W5 492 aa9.67□□□□□ -0.86
CACNA1A-236ENST00000637117 MEI1Q5TIA1 1274 aa9.67□□□□□ -0.86
CACNA1A-236ENST00000637117 CCDC73Q6ZRK6 1079 aa9.67□□□□□ -0.86
CACNA1A-236ENST00000637117 STXBP4Q6ZWJ1 553 aa9.67□□□□□ -0.86
CACNA1A-236ENST00000637117 FAM35AQ86V20 835 aa9.67□□□□□ -0.86
CACNA1A-236ENST00000637117 CCDC65Q8IXS2 484 aa9.67□□□□□ -0.86
CACNA1A-236ENST00000637117 GALNT15Q8N3T1 639 aa9.67□□□□□ -0.86
CACNA1A-236ENST00000637117 GLIS3Q8NEA6 775 aa9.67□□□□□ -0.86
CACNA1A-236ENST00000637117 CCDC127Q96BQ5 260 aa9.67□□□□□ -0.86
CACNA1A-236ENST00000637117 CGRRF1Q99675 332 aa9.67□□□□□ -0.86
CACNA1A-236ENST00000637117 TRIM9Q9C026 710 aa9.67□□□□□ -0.86
CACNA1A-236ENST00000637117 SUV39H2Q9H5I1 410 aa9.67□□□□□ -0.86
CACNA1A-236ENST00000637117 DMAP1Q9NPF5 467 aaPredicted RBP9.67□□□□□ -0.86
CACNA1A-236ENST00000637117 TLR8Q9NR97 1041 aaKnown RBP9.67□□□□□ -0.86
CACNA1A-236ENST00000637117 USP36Q9P275 1121 aaKnown RBP9.67□□□□□ -0.86
CACNA1A-236ENST00000637117 FBXO2Q9UK22 296 aaPredicted RBP9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms