RNA–Protein interactions for RNA: ENST00000636020.1

CLN6-212, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 894 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-212ENST00000636020 SDCBP2Q9H190 292 aa19.01■□□□□ 0.63
CLN6-212ENST00000636020 ASCL3Q9NQ33 180 aa19.01■□□□□ 0.63
CLN6-212ENST00000636020 STK17AQ9UEE5 414 aa19.01■□□□□ 0.63
CLN6-212ENST00000636020 FLNCQ14315 2725 aa19■□□□□ 0.63
CLN6-212ENST00000636020 FRMD3A2A2Y4 597 aa19■□□□□ 0.63
CLN6-212ENST00000636020 TLR4O00206 839 aa19■□□□□ 0.63
CLN6-212ENST00000636020 TERTO14746 1132 aaKnown RBP19■□□□□ 0.63
CLN6-212ENST00000636020 HMBSP08397 361 aa19■□□□□ 0.63
CLN6-212ENST00000636020 IDEP14735 1019 aa19■□□□□ 0.63
CLN6-212ENST00000636020 HLA-FP30511 346 aa19■□□□□ 0.63
CLN6-212ENST00000636020 NFATC3Q12968 1075 aa19■□□□□ 0.63
CLN6-212ENST00000636020 PSMD6Q15008 389 aa19■□□□□ 0.63
CLN6-212ENST00000636020 SNRNP35Q16560 246 aaKnown RBP19■□□□□ 0.63
CLN6-212ENST00000636020 CDCP2Q5VXM1 449 aa19■□□□□ 0.63
CLN6-212ENST00000636020 TADA2BQ86TJ2 420 aa19■□□□□ 0.63
CLN6-212ENST00000636020 DENND1CQ8IV53 801 aa19■□□□□ 0.63
CLN6-212ENST00000636020 OXR1Q8N573 874 aa19■□□□□ 0.63
CLN6-212ENST00000636020 RDH13Q8NBN7 331 aa19■□□□□ 0.63
CLN6-212ENST00000636020 EPSTI1Q96J88 318 aa19■□□□□ 0.63
CLN6-212ENST00000636020 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19■□□□□ 0.63
CLN6-212ENST00000636020 FAM117AQ9C073 453 aa19■□□□□ 0.63
CLN6-212ENST00000636020 PABPC3Q9H361 631 aaKnown RBP19■□□□□ 0.63
CLN6-212ENST00000636020 VRTNQ9H8Y1 702 aa19■□□□□ 0.63
CLN6-212ENST00000636020 FBXL12Q9NXK8 326 aa19■□□□□ 0.63
CLN6-212ENST00000636020 NAGPAQ9UK23 515 aa19■□□□□ 0.63
CLN6-212ENST00000636020 PCDHA5Q9Y5H7 936 aa19■□□□□ 0.63
CLN6-212ENST00000636020 HEMK1Q9Y5R4 338 aaPredicted RBP19■□□□□ 0.63
CLN6-212ENST00000636020 SV2BQ7L1I2 683 aa18.99■□□□□ 0.63
CLN6-212ENST00000636020 ADIPOR2Q86V24 386 aa18.99■□□□□ 0.63
CLN6-212ENST00000636020 FAM217AQ8IXS0 508 aa18.99■□□□□ 0.63
CLN6-212ENST00000636020 CRYBG2Q8N1P7 616 aa18.99■□□□□ 0.63
CLN6-212ENST00000636020 GANCQ8TET4 914 aa18.99■□□□□ 0.63
CLN6-212ENST00000636020 WFIKKN2Q8TEU8 576 aa18.99■□□□□ 0.63
CLN6-212ENST00000636020 CCDC127Q96BQ5 260 aa18.99■□□□□ 0.63
CLN6-212ENST00000636020 VCPIP1Q96JH7 1222 aa18.99■□□□□ 0.63
CLN6-212ENST00000636020 GZF1Q9H116 711 aaPredicted RBP18.99■□□□□ 0.63
CLN6-212ENST00000636020 RSPH9Q9H1X1 276 aaPredicted RBP18.99■□□□□ 0.63
CLN6-212ENST00000636020 POLR1BQ9H9Y6 1135 aa18.99■□□□□ 0.63
CLN6-212ENST00000636020 SERGEFQ9UGK8 458 aa18.99■□□□□ 0.63
CLN6-212ENST00000636020 SUN2Q9UH99 717 aa18.99■□□□□ 0.63
CLN6-212ENST00000636020 SCML1Q9UN30 329 aa18.99■□□□□ 0.63
CLN6-212ENST00000636020 SIGLEC6O43699 453 aa18.98■□□□□ 0.63
CLN6-212ENST00000636020 USP12O75317 370 aa18.98■□□□□ 0.63
CLN6-212ENST00000636020 HOXD9P28356 352 aaPredicted RBP18.98■□□□□ 0.63
CLN6-212ENST00000636020 PSEN1P49768 467 aa18.98■□□□□ 0.63
CLN6-212ENST00000636020 CCR5P51681 352 aa18.98■□□□□ 0.63
CLN6-212ENST00000636020 CYP24A1Q07973 514 aa18.98■□□□□ 0.63
CLN6-212ENST00000636020 BMT2Q1RMZ1 405 aa18.98■□□□□ 0.63
CLN6-212ENST00000636020 CLEC20AQ6ZU45 233 aa18.98■□□□□ 0.63
CLN6-212ENST00000636020 CHST9Q7L1S5 443 aa18.98■□□□□ 0.63
CLN6-212ENST00000636020 KIAA0907Q7Z7F0 614 aaPredicted RBP18.98■□□□□ 0.63
CLN6-212ENST00000636020 SPATS2Q86XZ4 545 aaKnown RBP18.98■□□□□ 0.63
CLN6-212ENST00000636020 ZC3H3Q8IXZ2 948 aaKnown RBP18.98■□□□□ 0.63
CLN6-212ENST00000636020 C12orf29Q8N999 325 aa18.98■□□□□ 0.63
CLN6-212ENST00000636020 EXD3Q8N9H8 876 aa18.98■□□□□ 0.63
CLN6-212ENST00000636020 OR2T34Q8NGX1 318 aa18.98■□□□□ 0.63
CLN6-212ENST00000636020 JAKMIP2Q96AA8 810 aa18.98■□□□□ 0.63
CLN6-212ENST00000636020 NEUROG2Q9H2A3 272 aa18.98■□□□□ 0.63
CLN6-212ENST00000636020 PANK4Q9NVE7 773 aa18.98■□□□□ 0.63
CLN6-212ENST00000636020 CLIC5Q9NZA1 410 aa18.98■□□□□ 0.63
CLN6-212ENST00000636020 DACH1Q9UI36 760 aa18.98■□□□□ 0.63
CLN6-212ENST00000636020 RASAL2Q9UJF2 1139 aa18.98■□□□□ 0.63
CLN6-212ENST00000636020 LRRC72A6NJI9 287 aa18.97■□□□□ 0.63
CLN6-212ENST00000636020 TRIM38O00635 465 aa18.97■□□□□ 0.63
CLN6-212ENST00000636020 FAM200BP0CF97 657 aa18.97■□□□□ 0.63
CLN6-212ENST00000636020 RALAP11233 206 aa18.97■□□□□ 0.63
CLN6-212ENST00000636020 HOXD13P35453 343 aa18.97■□□□□ 0.63
CLN6-212ENST00000636020 KIF11P52732 1056 aa18.97■□□□□ 0.63
CLN6-212ENST00000636020 ZNF211Q13398 564 aaPredicted RBP18.97■□□□□ 0.63
CLN6-212ENST00000636020 ZNF667Q5HYK9 610 aa18.97■□□□□ 0.63
CLN6-212ENST00000636020 SCARA5Q6ZMJ2 495 aa18.97■□□□□ 0.63
CLN6-212ENST00000636020 CCDC186Q7Z3E2 898 aa18.97■□□□□ 0.63
CLN6-212ENST00000636020 SERAC1Q96JX3 654 aa18.97■□□□□ 0.63
CLN6-212ENST00000636020 MTG2Q9H4K7 406 aa18.97■□□□□ 0.63
CLN6-212ENST00000636020 PNPLA8Q9NP80 782 aa18.97■□□□□ 0.63
CLN6-212ENST00000636020 THSD1Q9NS62 852 aa18.97■□□□□ 0.63
CLN6-212ENST00000636020 FAM49BQ9NUQ9 324 aa18.97■□□□□ 0.63
CLN6-212ENST00000636020 OPA1O60313 960 aa18.96■□□□□ 0.63
CLN6-212ENST00000636020 BMP15O95972 392 aa18.96■□□□□ 0.63
CLN6-212ENST00000636020 DLDP09622 509 aaKnown RBP18.96■□□□□ 0.63
CLN6-212ENST00000636020 ADORA2BP29275 332 aa18.96■□□□□ 0.63
CLN6-212ENST00000636020 SKOR1P84550 965 aa18.96■□□□□ 0.63
CLN6-212ENST00000636020 EFEMP1Q12805 493 aa18.96■□□□□ 0.63
CLN6-212ENST00000636020 ZNF699Q32M78 642 aa18.96■□□□□ 0.63
CLN6-212ENST00000636020 MPPE1Q53F39 396 aa18.96■□□□□ 0.63
CLN6-212ENST00000636020 SLC45A4Q5BKX6 768 aa18.96■□□□□ 0.63
CLN6-212ENST00000636020 ZNF574Q6ZN55 896 aaPredicted RBP18.96■□□□□ 0.63
CLN6-212ENST00000636020 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.96■□□□□ 0.63
CLN6-212ENST00000636020 ELMO3Q96BJ8 720 aa18.96■□□□□ 0.63
CLN6-212ENST00000636020 DEPDC7Q96QD5 511 aa18.96■□□□□ 0.63
CLN6-212ENST00000636020 CDK5RAP1Q96SZ6 601 aaKnown RBP18.96■□□□□ 0.63
CLN6-212ENST00000636020 ABCB8Q9NUT2 735 aa18.96■□□□□ 0.63
CLN6-212ENST00000636020 ANKMY1Q9P2S6 941 aa18.96■□□□□ 0.63
CLN6-212ENST00000636020 HMGXB4Q9UGU5 601 aa18.96■□□□□ 0.63
CLN6-212ENST00000636020 KIF3AQ9Y496 699 aa18.96■□□□□ 0.63
CLN6-212ENST00000636020 PHACTR2O75167 634 aa18.95■□□□□ 0.62
CLN6-212ENST00000636020 NDST1P52848 882 aa18.95■□□□□ 0.62
CLN6-212ENST00000636020 SFSWAPQ12872 951 aaKnown RBP18.95■□□□□ 0.62
CLN6-212ENST00000636020 RRAGBQ5VZM2 374 aa18.95■□□□□ 0.62
CLN6-212ENST00000636020 MBLAC2Q68D91 279 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms