RNA–Protein interactions for RNA: ENST00000634363.1

SNRNP48-203, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 781 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-203ENST00000634363 TOE1Q96GM8 510 aaKnown RBP16.26■□□□□ 0.19
SNRNP48-203ENST00000634363 LHX6Q9UPM6 363 aa16.26■□□□□ 0.19
SNRNP48-203ENST00000634363 SYNCRIPO60506 623 aaKnown RBP16.25■□□□□ 0.19
SNRNP48-203ENST00000634363 PAEPP09466 180 aa16.25■□□□□ 0.19
SNRNP48-203ENST00000634363 VDRP11473 427 aa16.25■□□□□ 0.19
SNRNP48-203ENST00000634363 NCAM1P13591 858 aa16.25■□□□□ 0.19
SNRNP48-203ENST00000634363 ZNF18P17022 549 aa16.25■□□□□ 0.19
SNRNP48-203ENST00000634363 CORO1AP31146 461 aaKnown RBP16.25■□□□□ 0.19
SNRNP48-203ENST00000634363 CHKAP35790 457 aa16.25■□□□□ 0.19
SNRNP48-203ENST00000634363 IL12RB1P42701 662 aa16.25■□□□□ 0.19
SNRNP48-203ENST00000634363 PSEN1P49768 467 aa16.25■□□□□ 0.19
SNRNP48-203ENST00000634363 KIF11P52732 1056 aa16.25■□□□□ 0.19
SNRNP48-203ENST00000634363 COPB1P53618 953 aaKnown RBP16.25■□□□□ 0.19
SNRNP48-203ENST00000634363 SLC8A3P57103 927 aa16.25■□□□□ 0.19
SNRNP48-203ENST00000634363 COG7P83436 770 aa16.25■□□□□ 0.19
SNRNP48-203ENST00000634363 SLC14A1Q13336 389 aa16.25■□□□□ 0.19
SNRNP48-203ENST00000634363 GEN1Q17RS7 908 aa16.25■□□□□ 0.19
SNRNP48-203ENST00000634363 PPP1R26Q5T8A7 1209 aaPredicted RBP16.25■□□□□ 0.19
SNRNP48-203ENST00000634363 ARHGAP17Q68EM7 881 aa16.25■□□□□ 0.19
SNRNP48-203ENST00000634363 RAB44Q7Z6P3 723 aaPredicted RBP16.25■□□□□ 0.19
SNRNP48-203ENST00000634363 TMPRSS6Q8IU80 811 aa16.25■□□□□ 0.19
SNRNP48-203ENST00000634363 NAXDQ8IW45 347 aa16.25■□□□□ 0.19
SNRNP48-203ENST00000634363 UCMAQ8WVF2 138 aa16.25■□□□□ 0.19
SNRNP48-203ENST00000634363 P2RY11Q96G91 374 aa16.25■□□□□ 0.19
SNRNP48-203ENST00000634363 KREMEN1Q96MU8 473 aa16.25■□□□□ 0.19
SNRNP48-203ENST00000634363 DUSP16Q9BY84 665 aa16.25■□□□□ 0.19
SNRNP48-203ENST00000634363 MKRN2Q9H000 416 aaKnown RBP16.25■□□□□ 0.19
SNRNP48-203ENST00000634363 ITM2CQ9NQX7 267 aa16.25■□□□□ 0.19
SNRNP48-203ENST00000634363 WSB2Q9NYS7 404 aaPredicted RBP16.25■□□□□ 0.19
SNRNP48-203ENST00000634363 LIMA1Q9UHB6 759 aaKnown RBP16.25■□□□□ 0.19
SNRNP48-203ENST00000634363 FBXO10Q9UK96 956 aa16.25■□□□□ 0.19
SNRNP48-203ENST00000634363 KIAA1257Q9ULG3 409 aa16.25■□□□□ 0.19
SNRNP48-203ENST00000634363 ZNF510Q9Y2H8 683 aa16.25■□□□□ 0.19
SNRNP48-203ENST00000634363 IGF2RP11717 2491 aa16.24■□□□□ 0.19
SNRNP48-203ENST00000634363 FAM208BQ5VWN6 2430 aa16.24■□□□□ 0.19
SNRNP48-203ENST00000634363 ACADMP11310 421 aa16.24■□□□□ 0.19
SNRNP48-203ENST00000634363 GRIK2Q13002 908 aa16.24■□□□□ 0.19
SNRNP48-203ENST00000634363 ARHGAP44Q17R89 818 aa16.24■□□□□ 0.19
SNRNP48-203ENST00000634363 GOLGA7BQ2TAP0 167 aa16.24■□□□□ 0.19
SNRNP48-203ENST00000634363 GJB7Q6PEY0 223 aa16.24■□□□□ 0.19
SNRNP48-203ENST00000634363 RSRC2Q7L4I2 434 aaKnown RBP16.24■□□□□ 0.19
SNRNP48-203ENST00000634363 CCDC186Q7Z3E2 898 aa16.24■□□□□ 0.19
SNRNP48-203ENST00000634363 CACUL1Q86Y37 369 aa16.24■□□□□ 0.19
SNRNP48-203ENST00000634363 DENND1CQ8IV53 801 aa16.24■□□□□ 0.19
SNRNP48-203ENST00000634363 ZCCHC9Q8N567 271 aaKnown RBP16.24■□□□□ 0.19
SNRNP48-203ENST00000634363 SETD7Q8WTS6 366 aaKnown RBP16.24■□□□□ 0.19
SNRNP48-203ENST00000634363 PRCCQ92733 491 aaPredicted RBP16.24■□□□□ 0.19
SNRNP48-203ENST00000634363 SIPA1Q96FS4 1042 aa16.24■□□□□ 0.19
SNRNP48-203ENST00000634363 CIPCQ9C0C6 399 aa16.24■□□□□ 0.19
SNRNP48-203ENST00000634363 PNPLA8Q9NP80 782 aa16.24■□□□□ 0.19
SNRNP48-203ENST00000634363 HESX1Q9UBX0 185 aa16.24■□□□□ 0.19
SNRNP48-203ENST00000634363 A0A1B0GTW7 788 aa16.23■□□□□ 0.19
SNRNP48-203ENST00000634363 LGALS16A8MUM7 142 aa16.23■□□□□ 0.19
SNRNP48-203ENST00000634363 TAF4O00268 1085 aa16.23■□□□□ 0.19
SNRNP48-203ENST00000634363 GJB3O75712 270 aa16.23■□□□□ 0.19
SNRNP48-203ENST00000634363 CYBBP04839 570 aa16.23■□□□□ 0.19
SNRNP48-203ENST00000634363 FTH1P19P0C7X4 201 aa16.23■□□□□ 0.19
SNRNP48-203ENST00000634363 USP8P40818 1118 aa16.23■□□□□ 0.19
SNRNP48-203ENST00000634363 TPMTP51580 245 aa16.23■□□□□ 0.19
SNRNP48-203ENST00000634363 BCAT1P54687 386 aa16.23■□□□□ 0.19
SNRNP48-203ENST00000634363 APBA1Q02410 837 aa16.23■□□□□ 0.19
SNRNP48-203ENST00000634363 ARID5AQ03989 594 aa16.23■□□□□ 0.19
SNRNP48-203ENST00000634363 ZNF234Q14588 700 aa16.23■□□□□ 0.19
SNRNP48-203ENST00000634363 DCAF12L1Q5VU92 463 aa16.23■□□□□ 0.19
SNRNP48-203ENST00000634363 FYB2Q5VWT5 728 aa16.23■□□□□ 0.19
SNRNP48-203ENST00000634363 FAM124AQ86V42 546 aa16.23■□□□□ 0.19
SNRNP48-203ENST00000634363 DDI1Q8WTU0 396 aa16.23■□□□□ 0.19
SNRNP48-203ENST00000634363 SORCS1Q8WY21 1168 aa16.23■□□□□ 0.19
SNRNP48-203ENST00000634363 PCMTD1Q96MG8 357 aaPredicted RBP16.23■□□□□ 0.19
SNRNP48-203ENST00000634363 CDK5RAP1Q96SZ6 601 aaKnown RBP16.23■□□□□ 0.19
SNRNP48-203ENST00000634363 DCLK3Q9C098 648 aa16.23■□□□□ 0.19
SNRNP48-203ENST00000634363 HSD3B7Q9H2F3 369 aa16.23■□□□□ 0.19
SNRNP48-203ENST00000634363 CBX8Q9HC52 389 aa16.23■□□□□ 0.19
SNRNP48-203ENST00000634363 ELOVL2Q9NXB9 296 aa16.23■□□□□ 0.19
SNRNP48-203ENST00000634363 CLIC5Q9NZA1 410 aa16.23■□□□□ 0.19
SNRNP48-203ENST00000634363 THAP10Q9P2Z0 257 aaPredicted RBP16.23■□□□□ 0.19
SNRNP48-203ENST00000634363 EIF2B4Q9UI10 523 aaKnown RBP16.23■□□□□ 0.19
SNRNP48-203ENST00000634363 DNAJC12Q9UKB3 198 aa16.23■□□□□ 0.19
SNRNP48-203ENST00000634363 TSPAN16Q9UKR8 245 aa16.23■□□□□ 0.19
SNRNP48-203ENST00000634363 AGO1Q9UL18 857 aaKnown RBP16.23■□□□□ 0.19
SNRNP48-203ENST00000634363 SLC27A6Q9Y2P4 619 aa16.23■□□□□ 0.19
SNRNP48-203ENST00000634363 AKAP13Q12802 2813 aa16.23■□□□□ 0.19
SNRNP48-203ENST00000634363 SLC12A8A0AV02 714 aa16.22■□□□□ 0.19
SNRNP48-203ENST00000634363 FAM221BA6H8Z2 402 aa16.22■□□□□ 0.19
SNRNP48-203ENST00000634363 GOLGA6L19H0YKK7 550 aa16.22■□□□□ 0.19
SNRNP48-203ENST00000634363 PENKP01210 267 aaPredicted RBP16.22■□□□□ 0.19
SNRNP48-203ENST00000634363 EPHX1P07099 455 aa16.22■□□□□ 0.19
SNRNP48-203ENST00000634363 ATP1A3P13637 1013 aa16.22■□□□□ 0.19
SNRNP48-203ENST00000634363 ZNF132P52740 706 aa16.22■□□□□ 0.19
SNRNP48-203ENST00000634363 UBXN1Q04323 297 aa16.22■□□□□ 0.19
SNRNP48-203ENST00000634363 SCAPQ12770 1279 aa16.22■□□□□ 0.19
SNRNP48-203ENST00000634363 KCNMA1Q12791 1236 aa16.22■□□□□ 0.19
SNRNP48-203ENST00000634363 RAPGEF1Q13905 1077 aa16.22■□□□□ 0.19
SNRNP48-203ENST00000634363 IQCB1Q15051 598 aa16.22■□□□□ 0.19
SNRNP48-203ENST00000634363 STILQ15468 1287 aa16.22■□□□□ 0.19
SNRNP48-203ENST00000634363 C19orf48Q6RUI8 117 aa16.22■□□□□ 0.19
SNRNP48-203ENST00000634363 METTL3Q86U44 580 aaKnown RBP16.22■□□□□ 0.19
SNRNP48-203ENST00000634363 ZNF276Q8N554 614 aa16.22■□□□□ 0.19
SNRNP48-203ENST00000634363 ANKRD52Q8NB46 1076 aa16.22■□□□□ 0.19
SNRNP48-203ENST00000634363 DNASE2BQ8WZ79 361 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms