RNA–Protein interactions for RNA: ENST00000628904.2

PKP4-217, Transcript of plakophilin 4, humanhuman

TSL 5 BASIC

Gene PKP4, Length 3,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-217ENST00000628904 NME7Q9Y5B8 376 aa7.74□□□□□ -1.17
PKP4-217ENST00000628904 SIPA1L1O43166 1804 aa7.74□□□□□ -1.17
PKP4-217ENST00000628904 FAM237BA0A1B0GVD1 139 aa7.74□□□□□ -1.17
PKP4-217ENST00000628904 LYPLA1O75608 230 aaPredicted RBP7.74□□□□□ -1.17
PKP4-217ENST00000628904 ZMPSTE24O75844 475 aa7.74□□□□□ -1.17
PKP4-217ENST00000628904 MTA2O94776 668 aa7.74□□□□□ -1.17
PKP4-217ENST00000628904 ZNF132P52740 706 aa7.74□□□□□ -1.17
PKP4-217ENST00000628904 NAA25Q14CX7 972 aa7.74□□□□□ -1.17
PKP4-217ENST00000628904 KLHL38Q2WGJ6 581 aa7.74□□□□□ -1.17
PKP4-217ENST00000628904 VSTM1Q6UX27 236 aa7.74□□□□□ -1.17
PKP4-217ENST00000628904 RNF180Q86T96 592 aa7.74□□□□□ -1.17
PKP4-217ENST00000628904 RUBCNQ92622 972 aa7.74□□□□□ -1.17
PKP4-217ENST00000628904 PGM2Q96G03 612 aa7.74□□□□□ -1.17
PKP4-217ENST00000628904 TTC25Q96NG3 672 aa7.74□□□□□ -1.17
PKP4-217ENST00000628904 FAM167BQ9BTA0 163 aa7.74□□□□□ -1.17
PKP4-217ENST00000628904 ADAMTS10Q9H324 1103 aa7.74□□□□□ -1.17
PKP4-217ENST00000628904 CHST12Q9NRB3 414 aa7.74□□□□□ -1.17
PKP4-217ENST00000628904 PLK2Q9NYY3 685 aa7.74□□□□□ -1.17
PKP4-217ENST00000628904 HEY2Q9UBP5 337 aa7.74□□□□□ -1.17
PKP4-217ENST00000628904 DNAJB4Q9UDY4 337 aa7.74□□□□□ -1.17
PKP4-217ENST00000628904 TRPV2Q9Y5S1 764 aa7.74□□□□□ -1.17
PKP4-217ENST00000628904 DLEC1Q9Y238 1755 aa7.73□□□□□ -1.17
PKP4-217ENST00000628904 SMIM35A0A1B0GVV1 85 aa7.73□□□□□ -1.17
PKP4-217ENST00000628904 UBA6A0AVT1 1052 aaPredicted RBP7.73□□□□□ -1.17
PKP4-217ENST00000628904 PTGESO14684 152 aa7.73□□□□□ -1.17
PKP4-217ENST00000628904 NUDT17P0C025 328 aa7.73□□□□□ -1.17
PKP4-217ENST00000628904 TGM2P21980 687 aa7.73□□□□□ -1.17
PKP4-217ENST00000628904 PCSK1P29120 753 aa7.73□□□□□ -1.17
PKP4-217ENST00000628904 WEE1P30291 646 aa7.73□□□□□ -1.17
PKP4-217ENST00000628904 ARFIP2P53365 341 aa7.73□□□□□ -1.17
PKP4-217ENST00000628904 WDR4P57081 412 aaKnown RBP7.73□□□□□ -1.17
PKP4-217ENST00000628904 GPX6P59796 221 aa7.73□□□□□ -1.17
PKP4-217ENST00000628904 MRPS5P82675 430 aaKnown RBP7.73□□□□□ -1.17
PKP4-217ENST00000628904 SEMG2Q02383 582 aa7.73□□□□□ -1.17
PKP4-217ENST00000628904 CTBP1Q13363 440 aa7.73□□□□□ -1.17
PKP4-217ENST00000628904 COL9A2Q14055 689 aaPredicted RBP7.73□□□□□ -1.17
PKP4-217ENST00000628904 PPP1R2P3Q6NXS1 205 aa7.73□□□□□ -1.17
PKP4-217ENST00000628904 OLFML1Q6UWY5 402 aa7.73□□□□□ -1.17
PKP4-217ENST00000628904 CLEC20AQ6ZU45 233 aa7.73□□□□□ -1.17
PKP4-217ENST00000628904 TTC9BQ8N6N2 239 aa7.73□□□□□ -1.17
PKP4-217ENST00000628904 SMG8Q8ND04 991 aaKnown RBP7.73□□□□□ -1.17
PKP4-217ENST00000628904 CFAP61Q8NHU2 1237 aa7.73□□□□□ -1.17
PKP4-217ENST00000628904 GIMAP7Q8NHV1 300 aa7.73□□□□□ -1.17
PKP4-217ENST00000628904 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.73□□□□□ -1.172e-7■■■■■ 64.2
PKP4-217ENST00000628904 EPAS1Q99814 870 aa7.73□□□□□ -1.17
PKP4-217ENST00000628904 OMDQ99983 421 aa7.73□□□□□ -1.17
PKP4-217ENST00000628904 BCO2Q9BYV7 579 aa7.73□□□□□ -1.17
PKP4-217ENST00000628904 MANSC1Q9H8J5 431 aa7.73□□□□□ -1.17
PKP4-217ENST00000628904 NT5MQ9NPB1 228 aa7.73□□□□□ -1.17
PKP4-217ENST00000628904 DTLQ9NZJ0 730 aa7.73□□□□□ -1.17
PKP4-217ENST00000628904 PCDHGC3Q9UN70 934 aa7.73□□□□□ -1.17
PKP4-217ENST00000628904 TBKBP1A7MCY6 615 aa7.73□□□□□ -1.17
PKP4-217ENST00000628904 KRT38O76015 456 aa7.73□□□□□ -1.17
PKP4-217ENST00000628904 ZNF865P0CJ78 1059 aaPredicted RBP7.73□□□□□ -1.17
PKP4-217ENST00000628904 EZRP15311 586 aaKnown RBP7.73□□□□□ -1.17
PKP4-217ENST00000628904 HNRNPH1P31943 449 aaKnown RBP7.73□□□□□ -1.17
PKP4-217ENST00000628904 CHRNA4P43681 627 aa7.73□□□□□ -1.17
PKP4-217ENST00000628904 MMP13P45452 471 aa7.73□□□□□ -1.17
PKP4-217ENST00000628904 TUBP50607 506 aa7.73□□□□□ -1.17
PKP4-217ENST00000628904 DRG2P55039 364 aaKnown RBP7.73□□□□□ -1.17
PKP4-217ENST00000628904 SP3Q02447 781 aa7.73□□□□□ -1.17
PKP4-217ENST00000628904 ZNF460Q14592 562 aa7.73□□□□□ -1.17
PKP4-217ENST00000628904 MAMDC4Q6UXC1 1216 aa7.73□□□□□ -1.17
PKP4-217ENST00000628904 ARHGAP36Q6ZRI8 547 aa7.73□□□□□ -1.17
PKP4-217ENST00000628904 SYDE1Q6ZW31 735 aaPredicted RBP7.73□□□□□ -1.17
PKP4-217ENST00000628904 PTAR1Q7Z6K3 402 aaPredicted RBP7.73□□□□□ -1.17
PKP4-217ENST00000628904 ATPAF2Q8N5M1 289 aa7.73□□□□□ -1.17
PKP4-217ENST00000628904 BLOC1S5Q8TDH9 187 aa7.73□□□□□ -1.17
PKP4-217ENST00000628904 SLC35F5Q8WV83 523 aa7.73□□□□□ -1.17
PKP4-217ENST00000628904 AUTS2Q8WXX7 1259 aa7.73□□□□□ -1.17
PKP4-217ENST00000628904 DEFB118Q96PH6 123 aa7.73□□□□□ -1.17
PKP4-217ENST00000628904 TRIM55Q9BYV6 548 aa7.73□□□□□ -1.17
PKP4-217ENST00000628904 LHX5Q9H2C1 402 aa7.73□□□□□ -1.17
PKP4-217ENST00000628904 POPDC2Q9HBU9 364 aa7.73□□□□□ -1.17
PKP4-217ENST00000628904 CRTAC1Q9NQ79 661 aa7.73□□□□□ -1.17
PKP4-217ENST00000628904 KLC4Q9NSK0 619 aa7.73□□□□□ -1.17
PKP4-217ENST00000628904 SLC12A8A0AV02 714 aa7.73□□□□□ -1.17
PKP4-217ENST00000628904 VAPBO95292 243 aa7.73□□□□□ -1.17
PKP4-217ENST00000628904 CHRNA1P02708 482 aa7.73□□□□□ -1.17
PKP4-217ENST00000628904 PFKMP08237 780 aa7.73□□□□□ -1.17
PKP4-217ENST00000628904 MYL2P10916 166 aa7.73□□□□□ -1.17
PKP4-217ENST00000628904 ESRRAP11474 423 aaPredicted RBP7.73□□□□□ -1.17
PKP4-217ENST00000628904 NFKB1P19838 968 aa7.73□□□□□ -1.17
PKP4-217ENST00000628904 TCN1P20061 433 aaPredicted RBP7.73□□□□□ -1.17
PKP4-217ENST00000628904 PROZP22891 400 aa7.73□□□□□ -1.17
PKP4-217ENST00000628904 KLRC2P26717 231 aa7.73□□□□□ -1.17
PKP4-217ENST00000628904 HADHBP55084 474 aaKnown RBP7.73□□□□□ -1.17
PKP4-217ENST00000628904 CLDN10P78369 228 aa7.73□□□□□ -1.17
PKP4-217ENST00000628904 DUSP4Q13115 394 aa7.73□□□□□ -1.17
PKP4-217ENST00000628904 THOC5Q13769 683 aaKnown RBP7.73□□□□□ -1.17
PKP4-217ENST00000628904 PSMD5Q16401 504 aa7.73□□□□□ -1.17
PKP4-217ENST00000628904 FASTKD1Q53R41 847 aaKnown RBP7.73□□□□□ -1.17
PKP4-217ENST00000628904 TAF1BQ53T94 588 aaPredicted RBP7.73□□□□□ -1.17
PKP4-217ENST00000628904 TAF2Q6P1X5 1199 aa7.73□□□□□ -1.17
PKP4-217ENST00000628904 PDZD4Q76G19 769 aaPredicted RBP7.73□□□□□ -1.17
PKP4-217ENST00000628904 C16orf59Q7L2K0 433 aa7.73□□□□□ -1.17
PKP4-217ENST00000628904 RASAL3Q86YV0 1011 aa7.73□□□□□ -1.17
PKP4-217ENST00000628904 CD302Q8IX05 232 aa7.73□□□□□ -1.17
PKP4-217ENST00000628904 RNF148Q8N7C7 305 aa7.73□□□□□ -1.17
PKP4-217ENST00000628904 DBF4BQ8NFT6 615 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms