RNA–Protein interactions for RNA: ENST00000627238.1

TRIM29-221, Transcript of tripartite motif containing 29, humanhuman

TSL 5 BASIC

Gene TRIM29, Length 510 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM29-221ENST00000627238 FNDC3AQ9Y2H6 1198 aaKnown RBP17.21■□□□□ 0.35
TRIM29-221ENST00000627238 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.21■□□□□ 0.35
TRIM29-221ENST00000627238 GPSM3Q9Y4H4 160 aa17.21■□□□□ 0.35
TRIM29-221ENST00000627238 ADAMTS20P59510 1910 aa17.21■□□□□ 0.35
TRIM29-221ENST00000627238 IGSF10Q6WRI0 2623 aa17.2■□□□□ 0.34
TRIM29-221ENST00000627238 ACACAQ13085 2346 aa17.2■□□□□ 0.34
TRIM29-221ENST00000627238 CABIN1Q9Y6J0 2220 aa17.2■□□□□ 0.34
TRIM29-221ENST00000627238 CETN3O15182 167 aa17.2■□□□□ 0.34
TRIM29-221ENST00000627238 SLC16A3O15427 465 aaKnown RBP17.2■□□□□ 0.34
TRIM29-221ENST00000627238 EPB41P11171 864 aaKnown RBP17.2■□□□□ 0.34
TRIM29-221ENST00000627238 GRIA4P48058 902 aa17.2■□□□□ 0.34
TRIM29-221ENST00000627238 CUL2Q13617 745 aa17.2■□□□□ 0.34
TRIM29-221ENST00000627238 PTPRNQ16849 979 aa17.2■□□□□ 0.34
TRIM29-221ENST00000627238 GOLGA7BQ2TAP0 167 aa17.2■□□□□ 0.34
TRIM29-221ENST00000627238 CBWD6Q4V339 395 aa17.2■□□□□ 0.34
TRIM29-221ENST00000627238 PKDCCQ504Y2 493 aa17.2■□□□□ 0.34
TRIM29-221ENST00000627238 SGO2Q562F6 1265 aa17.2■□□□□ 0.34
TRIM29-221ENST00000627238 CBWD3Q5JTY5 395 aa17.2■□□□□ 0.34
TRIM29-221ENST00000627238 CBWD5Q5RIA9 395 aa17.2■□□□□ 0.34
TRIM29-221ENST00000627238 BSPRYQ5W0U4 402 aa17.2■□□□□ 0.34
TRIM29-221ENST00000627238 MSANTD2Q6P1R3 559 aa17.2■□□□□ 0.34
TRIM29-221ENST00000627238 TMPRSS7Q7RTY8 843 aa17.2■□□□□ 0.34
TRIM29-221ENST00000627238 AHI1Q8N157 1196 aa17.2■□□□□ 0.34
TRIM29-221ENST00000627238 UBR7Q8N806 425 aa17.2■□□□□ 0.34
TRIM29-221ENST00000627238 PNPLA1Q8N8W4 532 aa17.2■□□□□ 0.34
TRIM29-221ENST00000627238 ZNF557Q8N988 423 aaPredicted RBP17.2■□□□□ 0.34
TRIM29-221ENST00000627238 TATDN2Q93075 761 aa17.2■□□□□ 0.34
TRIM29-221ENST00000627238 LHX5Q9H2C1 402 aa17.2■□□□□ 0.34
TRIM29-221ENST00000627238 CNGB3Q9NQW8 809 aa17.2■□□□□ 0.34
TRIM29-221ENST00000627238 ABCC13Q9NSE7 274 aa17.2■□□□□ 0.34
TRIM29-221ENST00000627238 KIAA1257Q9ULG3 409 aa17.2■□□□□ 0.34
TRIM29-221ENST00000627238 PLA2G4CQ9UP65 541 aa17.2■□□□□ 0.34
TRIM29-221ENST00000627238 ZDHHC9Q9Y397 364 aa17.2■□□□□ 0.34
TRIM29-221ENST00000627238 NUMA1Q14980 2115 aa17.2■□□□□ 0.34
TRIM29-221ENST00000627238 APC2O95996 2303 aa17.19■□□□□ 0.34
TRIM29-221ENST00000627238 KNL1Q8NG31 2342 aa17.19■□□□□ 0.34
TRIM29-221ENST00000627238 PAPSS1O43252 624 aaPredicted RBP17.19■□□□□ 0.34
TRIM29-221ENST00000627238 IGLV3-27P01718 113 aa17.19■□□□□ 0.34
TRIM29-221ENST00000627238 SETSIPP0DME0 302 aa17.19■□□□□ 0.34
TRIM29-221ENST00000627238 ACSL1P33121 698 aa17.19■□□□□ 0.34
TRIM29-221ENST00000627238 YWHAEP62258 255 aaKnown RBP17.19■□□□□ 0.34
TRIM29-221ENST00000627238 ARID5AQ03989 594 aa17.19■□□□□ 0.34
TRIM29-221ENST00000627238 ADIGQ0VDE8 80 aa17.19■□□□□ 0.34
TRIM29-221ENST00000627238 COL9A2Q14055 689 aaPredicted RBP17.19■□□□□ 0.34
TRIM29-221ENST00000627238 RNF139Q8WU17 664 aa17.19■□□□□ 0.34
TRIM29-221ENST00000627238 AZIN2Q96A70 460 aa17.19■□□□□ 0.34
TRIM29-221ENST00000627238 TMA16Q96EY4 203 aaKnown RBP17.19■□□□□ 0.34
TRIM29-221ENST00000627238 CCDC86Q9H6F5 360 aaKnown RBP17.19■□□□□ 0.34
TRIM29-221ENST00000627238 LRRC4Q9HBW1 653 aa17.19■□□□□ 0.34
TRIM29-221ENST00000627238 HESX1Q9UBX0 185 aa17.19■□□□□ 0.34
TRIM29-221ENST00000627238 GGA2Q9UJY4 613 aa17.19■□□□□ 0.34
TRIM29-221ENST00000627238 YJEFN3A6XGL0 299 aa17.18■□□□□ 0.34
TRIM29-221ENST00000627238 E7ENQ6 273 aa17.18■□□□□ 0.34
TRIM29-221ENST00000627238 O00370 1275 aa17.18■□□□□ 0.34
TRIM29-221ENST00000627238 IRAK2O43187 625 aa17.18■□□□□ 0.34
TRIM29-221ENST00000627238 TSPAN3O60637 253 aa17.18■□□□□ 0.34
TRIM29-221ENST00000627238 DLDP09622 509 aaKnown RBP17.18■□□□□ 0.34
TRIM29-221ENST00000627238 VDRP11473 427 aa17.18■□□□□ 0.34
TRIM29-221ENST00000627238 PABPC1P11940 636 aaKnown RBP17.18■□□□□ 0.34
TRIM29-221ENST00000627238 HLA-EP13747 358 aa17.18■□□□□ 0.34
TRIM29-221ENST00000627238 DAOAP59103 153 aa17.18■□□□□ 0.34
TRIM29-221ENST00000627238 SUZ12Q15022 739 aaKnown RBP17.18■□□□□ 0.34
TRIM29-221ENST00000627238 FNDC3BQ53EP0 1204 aaKnown RBP17.18■□□□□ 0.34
TRIM29-221ENST00000627238 CHST9Q7L1S5 443 aa17.18■□□□□ 0.34
TRIM29-221ENST00000627238 SETD7Q8WTS6 366 aaKnown RBP17.18■□□□□ 0.34
TRIM29-221ENST00000627238 IRGQQ8WZA9 623 aa17.18■□□□□ 0.34
TRIM29-221ENST00000627238 NDRG1Q92597 394 aaKnown RBP17.18■□□□□ 0.34
TRIM29-221ENST00000627238 GOLGA1Q92805 767 aa17.18■□□□□ 0.34
TRIM29-221ENST00000627238 LMLNQ96KR4 655 aa17.18■□□□□ 0.34
TRIM29-221ENST00000627238 IPO9Q96P70 1041 aaKnown RBP17.18■□□□□ 0.34
TRIM29-221ENST00000627238 SCAND2PQ9GZW5 306 aaPredicted RBP17.18■□□□□ 0.34
TRIM29-221ENST00000627238 C6orf106Q9H6K1 298 aaPredicted RBP17.18■□□□□ 0.34
TRIM29-221ENST00000627238 SGK2Q9HBY8 427 aa17.18■□□□□ 0.34
TRIM29-221ENST00000627238 PRSS16Q9NQE7 514 aa17.18■□□□□ 0.34
TRIM29-221ENST00000627238 SFMBT1Q9UHJ3 866 aa17.18■□□□□ 0.34
TRIM29-221ENST00000627238 A0A1B0GVT2 93 aa17.17■□□□□ 0.34
TRIM29-221ENST00000627238 C10orf142B7Z368 130 aa17.17■□□□□ 0.34
TRIM29-221ENST00000627238 PCDHGA12O60330 932 aa17.17■□□□□ 0.34
TRIM29-221ENST00000627238 ZNF202O95125 648 aa17.17■□□□□ 0.34
TRIM29-221ENST00000627238 SEMA4FO95754 770 aa17.17■□□□□ 0.34
TRIM29-221ENST00000627238 ATP5BP06576 529 aaKnown RBP17.17■□□□□ 0.34
TRIM29-221ENST00000627238 TBXAS1P24557 533 aaPredicted RBP17.17■□□□□ 0.34
TRIM29-221ENST00000627238 CD27P26842 260 aa17.17■□□□□ 0.34
TRIM29-221ENST00000627238 CSNK1EP49674 416 aaKnown RBP17.17■□□□□ 0.34
TRIM29-221ENST00000627238 RPS14P62263 151 aaKnown RBP17.17■□□□□ 0.34
TRIM29-221ENST00000627238 ARID5BQ14865 1188 aa17.17■□□□□ 0.34
TRIM29-221ENST00000627238 KIF19Q2TAC6 998 aa17.17■□□□□ 0.34
TRIM29-221ENST00000627238 PIK3R6Q5UE93 754 aa17.17■□□□□ 0.34
TRIM29-221ENST00000627238 LCLAT1Q6UWP7 414 aa17.17■□□□□ 0.34
TRIM29-221ENST00000627238 USP30Q70CQ3 517 aa17.17■□□□□ 0.34
TRIM29-221ENST00000627238 SIX6OS1Q8N1H7 587 aa17.17■□□□□ 0.34
TRIM29-221ENST00000627238 KDM1BQ8NB78 822 aa17.17■□□□□ 0.34
TRIM29-221ENST00000627238 TMEM131Q92545 1883 aa17.17■□□□□ 0.34
TRIM29-221ENST00000627238 IGSF8Q969P0 613 aa17.17■□□□□ 0.34
TRIM29-221ENST00000627238 EEF2KMTQ96G04 330 aa17.17■□□□□ 0.34
TRIM29-221ENST00000627238 CCDC34Q96HJ3 373 aa17.17■□□□□ 0.34
TRIM29-221ENST00000627238 ORAI3Q9BRQ5 295 aa17.17■□□□□ 0.34
TRIM29-221ENST00000627238 BTBD1Q9H0C5 482 aa17.17■□□□□ 0.34
TRIM29-221ENST00000627238 GOLPH3LQ9H4A5 285 aa17.17■□□□□ 0.34
TRIM29-221ENST00000627238 TM9SF3Q9HD45 589 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms