RNA–Protein interactions for RNA: ENST00000627109.2

CTNNA1-244, Transcript of catenin alpha 1, humanhuman

TSL 5 BASIC

Gene CTNNA1, Length 3,831 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-244ENST00000627109 NLRP9Q7RTR0 991 aa7.4□□□□□ -1.22
CTNNA1-244ENST00000627109 PRPF39Q86UA1 669 aaKnown RBP7.4□□□□□ -1.22
CTNNA1-244ENST00000627109 CCDC33Q8N5R6 958 aa7.4□□□□□ -1.22
CTNNA1-244ENST00000627109 OR6Y1Q8NGX8 325 aa7.4□□□□□ -1.22
CTNNA1-244ENST00000627109 PPP1R14CQ8TAE6 165 aa7.4□□□□□ -1.22
CTNNA1-244ENST00000627109 UBA3Q8TBC4 463 aa7.4□□□□□ -1.22
CTNNA1-244ENST00000627109 MCMBPQ9BTE3 642 aa7.4□□□□□ -1.22
CTNNA1-244ENST00000627109 CXCL16Q9H2A7 254 aa7.4□□□□□ -1.22
CTNNA1-244ENST00000627109 NPHS2Q9NP85 383 aa7.4□□□□□ -1.22
CTNNA1-244ENST00000627109 CHMP2BQ9UQN3 213 aa7.4□□□□□ -1.22
CTNNA1-244ENST00000627109 MTO1Q9Y2Z2 717 aaKnown RBP7.4□□□□□ -1.22
CTNNA1-244ENST00000627109 LRRC42Q9Y546 428 aa7.4□□□□□ -1.22
CTNNA1-244ENST00000627109 MAD1L1Q9Y6D9 718 aa7.4□□□□□ -1.22
CTNNA1-244ENST00000627109 PLXNA3P51805 1871 aa7.4□□□□□ -1.22
CTNNA1-244ENST00000627109 PRPSAP2O60256 369 aa7.4□□□□□ -1.22
CTNNA1-244ENST00000627109 APOEP02649 317 aa7.4□□□□□ -1.22
CTNNA1-244ENST00000627109 MT-ND3P03897 115 aa7.4□□□□□ -1.22
CTNNA1-244ENST00000627109 MMP3P08254 477 aa7.4□□□□□ -1.22
CTNNA1-244ENST00000627109 INHBAP08476 426 aa7.4□□□□□ -1.22
CTNNA1-244ENST00000627109 GM2AP17900 193 aa7.4□□□□□ -1.22
CTNNA1-244ENST00000627109 AXLP30530 894 aa7.4□□□□□ -1.22
CTNNA1-244ENST00000627109 CRHR1P34998 444 aa7.4□□□□□ -1.22
CTNNA1-244ENST00000627109 SNX16P57768 344 aa7.4□□□□□ -1.22
CTNNA1-244ENST00000627109 IRX4P78413 519 aa7.4□□□□□ -1.22
CTNNA1-244ENST00000627109 VAC14Q08AM6 782 aa7.4□□□□□ -1.22
CTNNA1-244ENST00000627109 FAAP100Q0VG06 881 aa7.4□□□□□ -1.22
CTNNA1-244ENST00000627109 SOWAHAQ2M3V2 549 aa7.4□□□□□ -1.22
CTNNA1-244ENST00000627109 CCDC92Q53HC0 331 aaPredicted RBP7.4□□□□□ -1.22
CTNNA1-244ENST00000627109 PPP6R3Q5H9R7 873 aaPredicted RBP7.4□□□□□ -1.22
CTNNA1-244ENST00000627109 MARK2Q7KZI7 788 aaKnown RBP7.4□□□□□ -1.22
CTNNA1-244ENST00000627109 TLK2Q86UE8 772 aa7.4□□□□□ -1.22
CTNNA1-244ENST00000627109 CDKL3Q8IVW4 592 aaPredicted RBP7.4□□□□□ -1.22
CTNNA1-244ENST00000627109 HACE1Q8IYU2 909 aa7.4□□□□□ -1.22
CTNNA1-244ENST00000627109 ANKRD52Q8NB46 1076 aa7.4□□□□□ -1.22
CTNNA1-244ENST00000627109 STON2Q8WXE9 905 aa7.4□□□□□ -1.22
CTNNA1-244ENST00000627109 DPF3Q92784 378 aa7.4□□□□□ -1.22
CTNNA1-244ENST00000627109 MIPEPQ99797 713 aa7.4□□□□□ -1.22
CTNNA1-244ENST00000627109 RYDENQ9NUL5 291 aaKnown RBP7.4□□□□□ -1.22
CTNNA1-244ENST00000627109 AKT3Q9Y243 479 aa7.4□□□□□ -1.22
CTNNA1-244ENST00000627109 PCDHA11Q9Y5I1 949 aa7.4□□□□□ -1.22
CTNNA1-244ENST00000627109 A8MUI8 341 aa7.4□□□□□ -1.23
CTNNA1-244ENST00000627109 GNRH1P01148 92 aa7.4□□□□□ -1.23
CTNNA1-244ENST00000627109 TROVE2P10155 538 aaKnown RBP eCLIP7.4□□□□□ -1.23
CTNNA1-244ENST00000627109 GLUD2P49448 558 aa7.4□□□□□ -1.23
CTNNA1-244ENST00000627109 RGS7P49802 495 aa7.4□□□□□ -1.23
CTNNA1-244ENST00000627109 DUSP28Q4G0W2 176 aa7.4□□□□□ -1.23
CTNNA1-244ENST00000627109 FAXCQ5TGI0 409 aa7.4□□□□□ -1.23
CTNNA1-244ENST00000627109 C9orf57Q5W0N0 161 aa7.4□□□□□ -1.23
CTNNA1-244ENST00000627109 OLFML2BQ68BL8 750 aa7.4□□□□□ -1.23
CTNNA1-244ENST00000627109 NCBP2-AS2Q69YL0 99 aa7.4□□□□□ -1.23
CTNNA1-244ENST00000627109 CASC4Q6P4E1 433 aa7.4□□□□□ -1.23
CTNNA1-244ENST00000627109 SLC27A1Q6PCB7 646 aa7.4□□□□□ -1.23
CTNNA1-244ENST00000627109 RNF180Q86T96 592 aa7.4□□□□□ -1.23
CTNNA1-244ENST00000627109 FAM13CQ8NE31 585 aa7.4□□□□□ -1.23
CTNNA1-244ENST00000627109 RFWD2Q8NHY2 731 aa7.4□□□□□ -1.23
CTNNA1-244ENST00000627109 FAM172AQ8WUF8 416 aa7.4□□□□□ -1.23
CTNNA1-244ENST00000627109 LRRN4Q8WUT4 740 aa7.4□□□□□ -1.23
CTNNA1-244ENST00000627109 KCTD13Q8WZ19 329 aa7.4□□□□□ -1.23
CTNNA1-244ENST00000627109 STAMBPL1Q96FJ0 436 aa7.4□□□□□ -1.23
CTNNA1-244ENST00000627109 HSFY1Q96LI6 401 aa7.4□□□□□ -1.23
CTNNA1-244ENST00000627109 EBNA1BP2Q99848 306 aaKnown RBP7.4□□□□□ -1.23
CTNNA1-244ENST00000627109 SIKE1Q9BRV8 207 aa7.4□□□□□ -1.23
CTNNA1-244ENST00000627109 C12orf65Q9H3J6 166 aaKnown RBP7.4□□□□□ -1.23
CTNNA1-244ENST00000627109 NOP53Q9NZM5 478 aaKnown RBP7.4□□□□□ -1.23
CTNNA1-244ENST00000627109 SYNJ2BP-COX16A0A087WUM0 186 aa7.39□□□□□ -1.23
CTNNA1-244ENST00000627109 DIAPH2O60879 1101 aa7.39□□□□□ -1.23
CTNNA1-244ENST00000627109 ZNF286BP0CG31 522 aa7.39□□□□□ -1.23
CTNNA1-244ENST00000627109 DESP17661 470 aa7.39□□□□□ -1.23
CTNNA1-244ENST00000627109 RBL1P28749 1068 aa7.39□□□□□ -1.23
CTNNA1-244ENST00000627109 RASSF2P50749 326 aa7.39□□□□□ -1.23
CTNNA1-244ENST00000627109 NRLP54845 237 aa7.39□□□□□ -1.23
CTNNA1-244ENST00000627109 GRIK4Q16099 956 aa7.39□□□□□ -1.23
CTNNA1-244ENST00000627109 ACCSLQ4AC99 568 aa7.39□□□□□ -1.23
CTNNA1-244ENST00000627109 UNC5AQ6ZN44 842 aa7.39□□□□□ -1.23
CTNNA1-244ENST00000627109 JAZF1Q86VZ6 243 aa7.39□□□□□ -1.23
CTNNA1-244ENST00000627109 ACMSDQ8TDX5 336 aa7.39□□□□□ -1.23
CTNNA1-244ENST00000627109 TBC1D10AQ9BXI6 508 aa7.39□□□□□ -1.23
CTNNA1-244ENST00000627109 KLC2Q9H0B6 622 aa7.39□□□□□ -1.23
CTNNA1-244ENST00000627109 RNPEPL1Q9HAU8 725 aa7.39□□□□□ -1.23
CTNNA1-244ENST00000627109 PRDM5Q9NQX1 630 aaPredicted RBP7.39□□□□□ -1.23
CTNNA1-244ENST00000627109 KCNK4Q9NYG8 393 aa7.39□□□□□ -1.23
CTNNA1-244ENST00000627109 COX16Q9P0S2 106 aa7.39□□□□□ -1.23
CTNNA1-244ENST00000627109 HAO1Q9UJM8 370 aa7.39□□□□□ -1.23
CTNNA1-244ENST00000627109 FZD10Q9ULW2 581 aa7.39□□□□□ -1.23
CTNNA1-244ENST00000627109 FRMPD3Q5JV73 1810 aa7.39□□□□□ -1.23
CTNNA1-244ENST00000627109 SMIM35A0A1B0GVV1 85 aa7.39□□□□□ -1.23
CTNNA1-244ENST00000627109 CXorf49A8MYA2 514 aaPredicted RBP7.39□□□□□ -1.23
CTNNA1-244ENST00000627109 HAS3O00219 553 aa7.39□□□□□ -1.23
CTNNA1-244ENST00000627109 LPXNO60711 386 aa7.39□□□□□ -1.23
CTNNA1-244ENST00000627109 ANP32DO95626 131 aa7.39□□□□□ -1.23
CTNNA1-244ENST00000627109 ALOX15P16050 662 aaPredicted RBP7.39□□□□□ -1.23
CTNNA1-244ENST00000627109 SMPD1P17405 629 aa7.39□□□□□ -1.23
CTNNA1-244ENST00000627109 ELF1P32519 619 aa7.39□□□□□ -1.23
CTNNA1-244ENST00000627109 ACADSBP45954 432 aa7.39□□□□□ -1.23
CTNNA1-244ENST00000627109 MXRA7P84157 204 aa7.39□□□□□ -1.23
CTNNA1-244ENST00000627109 BST2Q10589 180 aaKnown RBP7.39□□□□□ -1.23
CTNNA1-244ENST00000627109 SEMA3BQ13214 749 aa7.39□□□□□ -1.23
CTNNA1-244ENST00000627109 ANKRD20A3Q5VUR7 823 aa7.39□□□□□ -1.23
CTNNA1-244ENST00000627109 CDHR3Q6ZTQ4 885 aa7.39□□□□□ -1.23
CTNNA1-244ENST00000627109 ARL10Q8N8L6 244 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms