RNA–Protein interactions for RNA: ENST00000625842.2

VPS8-227, Transcript of VPS8, CORVET complex subunit, humanhuman

APPRIS P4 TSL 5 BASIC

Gene VPS8, Length 4,969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-227ENST00000625842 PCNAP12004 261 aa11.37□□□□□ -0.59
VPS8-227ENST00000625842 TGM2P21980 687 aa11.37□□□□□ -0.59
VPS8-227ENST00000625842 BDNFP23560 247 aa11.37□□□□□ -0.59
VPS8-227ENST00000625842 PMS2P54278 862 aa11.37□□□□□ -0.59
VPS8-227ENST00000625842 CCINQ13939 588 aa11.37□□□□□ -0.59
VPS8-227ENST00000625842 ZNF268Q14587 947 aaPredicted RBP11.37□□□□□ -0.59
VPS8-227ENST00000625842 RASIP1Q5U651 963 aa11.37□□□□□ -0.59
VPS8-227ENST00000625842 PACS1Q6VY07 963 aa11.37□□□□□ -0.59
VPS8-227ENST00000625842 TRMT2AQ8IZ69 625 aaKnown RBP11.37□□□□□ -0.59
VPS8-227ENST00000625842 KLHL23Q8NBE8 558 aa11.37□□□□□ -0.59
VPS8-227ENST00000625842 CBWD1Q9BRT8 395 aa11.37□□□□□ -0.59
VPS8-227ENST00000625842 CERS4Q9HA82 394 aa11.37□□□□□ -0.59
VPS8-227ENST00000625842 PAPOLBQ9NRJ5 636 aaKnown RBP11.37□□□□□ -0.59
VPS8-227ENST00000625842 ADA2Q9NZK5 511 aa11.37□□□□□ -0.59
VPS8-227ENST00000625842 CTNNAL1Q9UBT7 734 aa11.37□□□□□ -0.59
VPS8-227ENST00000625842 ZNHIT2Q9UHR6 403 aa11.37□□□□□ -0.59
VPS8-227ENST00000625842 INTUQ9ULD6 942 aa11.37□□□□□ -0.59
VPS8-227ENST00000625842 GRID1Q9ULK0 1009 aa11.37□□□□□ -0.59
VPS8-227ENST00000625842 PSTPIP1O43586 416 aa11.37□□□□□ -0.59
VPS8-227ENST00000625842 PTPN1P18031 435 aaKnown RBP11.37□□□□□ -0.59
VPS8-227ENST00000625842 FSHRP23945 695 aa11.37□□□□□ -0.59
VPS8-227ENST00000625842 PEX5P50542 639 aa11.37□□□□□ -0.59
VPS8-227ENST00000625842 SGO1Q5FBB7 561 aa11.37□□□□□ -0.59
VPS8-227ENST00000625842 TPGS2Q68CL5 300 aa11.37□□□□□ -0.59
VPS8-227ENST00000625842 NEK5Q6P3R8 708 aa11.37□□□□□ -0.59
VPS8-227ENST00000625842 PAGE2Q7Z2X7 111 aa11.37□□□□□ -0.59
VPS8-227ENST00000625842 NLGN2Q8NFZ4 835 aa11.37□□□□□ -0.59
VPS8-227ENST00000625842 BAIAP2L1Q9UHR4 511 aa11.37□□□□□ -0.59
VPS8-227ENST00000625842 EDARQ9UNE0 448 aa11.37□□□□□ -0.59
VPS8-227ENST00000625842 PP2D1A8MPX8 630 aa11.36□□□□□ -0.59
VPS8-227ENST00000625842 FPGTO14772 594 aa11.36□□□□□ -0.59
VPS8-227ENST00000625842 RARGP13631 454 aa11.36□□□□□ -0.59
VPS8-227ENST00000625842 NAA20P61599 178 aa11.36□□□□□ -0.59
VPS8-227ENST00000625842 CRHR2Q13324 411 aa11.36□□□□□ -0.59
VPS8-227ENST00000625842 KBTBD12Q3ZCT8 623 aa11.36□□□□□ -0.59
VPS8-227ENST00000625842 TCEAL5Q5H9L2 206 aa11.36□□□□□ -0.59
VPS8-227ENST00000625842 KREMEN2Q8NCW0 462 aa11.36□□□□□ -0.59
VPS8-227ENST00000625842 KCNN2Q9H2S1 579 aa11.36□□□□□ -0.59
VPS8-227ENST00000625842 C3orf14Q9HBI5 128 aa11.36□□□□□ -0.59
VPS8-227ENST00000625842 C2CD2Q9Y426 696 aa11.36□□□□□ -0.59
VPS8-227ENST00000625842 CEMIPQ8WUJ3 1361 aa11.36□□□□□ -0.59
VPS8-227ENST00000625842 SGTAO43765 313 aa11.36□□□□□ -0.59
VPS8-227ENST00000625842 OR10H2O60403 315 aa11.36□□□□□ -0.59
VPS8-227ENST00000625842 RPA3P35244 121 aaPredicted RBP11.36□□□□□ -0.59
VPS8-227ENST00000625842 DMC1Q14565 340 aa11.36□□□□□ -0.59
VPS8-227ENST00000625842 ACAP1Q15027 740 aa11.36□□□□□ -0.59
VPS8-227ENST00000625842 ZKSCAN8Q15776 578 aaPredicted RBP11.36□□□□□ -0.59
VPS8-227ENST00000625842 ZC2HC1CQ53FD0 456 aaPredicted RBP11.36□□□□□ -0.59
VPS8-227ENST00000625842 FAM161BQ96MY7 647 aa11.36□□□□□ -0.59
VPS8-227ENST00000625842 CARD9Q9H257 536 aa11.36□□□□□ -0.59
VPS8-227ENST00000625842 CISHQ9NSE2 258 aa11.36□□□□□ -0.59
VPS8-227ENST00000625842 CHORDC1Q9UHD1 332 aaPredicted RBP11.36□□□□□ -0.59
VPS8-227ENST00000625842 RABGEF1Q9UJ41 708 aa11.36□□□□□ -0.59
VPS8-227ENST00000625842 MEIS2O14770 477 aa11.36□□□□□ -0.59
VPS8-227ENST00000625842 CYP7B1O75881 506 aa11.36□□□□□ -0.59
VPS8-227ENST00000625842 HIST1H2ABP04908 130 aa11.36□□□□□ -0.59
VPS8-227ENST00000625842 U2AF2P26368 475 aaKnown RBP eCLIP11.36□□□□□ -0.593e-9■■■■□ 26.2
VPS8-227ENST00000625842 RPL3P39023 403 aaKnown RBP11.36□□□□□ -0.59
VPS8-227ENST00000625842 ACLYP53396 1101 aa11.36□□□□□ -0.59
VPS8-227ENST00000625842 MCL1Q07820 350 aa11.36□□□□□ -0.59
VPS8-227ENST00000625842 ACAD10Q6JQN1 1059 aa11.36□□□□□ -0.59
VPS8-227ENST00000625842 HIBCHQ6NVY1 386 aaPredicted RBP11.36□□□□□ -0.59
VPS8-227ENST00000625842 HIST3H2AQ7L7L0 130 aa11.36□□□□□ -0.59
VPS8-227ENST00000625842 MON1AQ86VX9 555 aa11.36□□□□□ -0.59
VPS8-227ENST00000625842 HIST1H2ACQ93077 130 aa11.36□□□□□ -0.59
VPS8-227ENST00000625842 PALMDQ9NP74 551 aa11.36□□□□□ -0.59
VPS8-227ENST00000625842 ARHGEF4Q9NR80 690 aa11.36□□□□□ -0.59
VPS8-227ENST00000625842 NFKBIL1Q9UBC1 381 aaPredicted RBP11.36□□□□□ -0.59
VPS8-227ENST00000625842 XPO7Q9UIA9 1087 aaKnown RBP11.36□□□□□ -0.59
VPS8-227ENST00000625842 SNX6Q9UNH7 406 aa11.36□□□□□ -0.59
VPS8-227ENST00000625842 SMG5Q9UPR3 1016 aaKnown RBP11.36□□□□□ -0.59
VPS8-227ENST00000625842 SLCO1A2P46721 670 aa11.36□□□□□ -0.59
VPS8-227ENST00000625842 ZNF200P98182 395 aaPredicted RBP11.36□□□□□ -0.59
VPS8-227ENST00000625842 RALGDSQ12967 914 aa11.36□□□□□ -0.59
VPS8-227ENST00000625842 TOB2Q14106 344 aaPredicted RBP11.36□□□□□ -0.59
VPS8-227ENST00000625842 PUS10Q3MIT2 529 aaKnown RBP11.36□□□□□ -0.59
VPS8-227ENST00000625842 NT5DC3Q86UY8 548 aa11.36□□□□□ -0.59
VPS8-227ENST00000625842 MOSPD2Q8NHP6 518 aa11.36□□□□□ -0.59
VPS8-227ENST00000625842 SETD7Q8WTS6 366 aaKnown RBP11.36□□□□□ -0.59
VPS8-227ENST00000625842 CAPSLQ8WWF8 208 aa11.36□□□□□ -0.59
VPS8-227ENST00000625842 FAF1Q9UNN5 650 aaPredicted RBP11.36□□□□□ -0.59
VPS8-227ENST00000625842 LTBP3Q9NS15 1303 aa11.35□□□□□ -0.59
VPS8-227ENST00000625842 TRIM49BA6NDI0 452 aa11.35□□□□□ -0.59
VPS8-227ENST00000625842 TBL1XO60907 577 aa11.35□□□□□ -0.59
VPS8-227ENST00000625842 TIPRLO75663 272 aa11.35□□□□□ -0.59
VPS8-227ENST00000625842 SYPP08247 313 aa11.35□□□□□ -0.59
VPS8-227ENST00000625842 TMEM253P0C7T8 217 aa11.35□□□□□ -0.59
VPS8-227ENST00000625842 DGKAP23743 735 aa11.35□□□□□ -0.59
VPS8-227ENST00000625842 PTPN9P43378 593 aa11.35□□□□□ -0.59
VPS8-227ENST00000625842 RXRGP48443 463 aa11.35□□□□□ -0.59
VPS8-227ENST00000625842 PDGFRLQ15198 375 aa11.35□□□□□ -0.59
VPS8-227ENST00000625842 TAF8Q7Z7C8 310 aa11.35□□□□□ -0.59
VPS8-227ENST00000625842 GTPBP2Q9BX10 602 aaKnown RBP11.35□□□□□ -0.59
VPS8-227ENST00000625842 RRAGDQ9NQL2 400 aaPredicted RBP11.35□□□□□ -0.59
VPS8-227ENST00000625842 TMCO1Q9UM00 188 aa11.35□□□□□ -0.59
VPS8-227ENST00000625842 JCHAINP01591 159 aa11.35□□□□□ -0.59
VPS8-227ENST00000625842 EPHX1P07099 455 aa11.35□□□□□ -0.59
VPS8-227ENST00000625842 SNRPAP09012 282 aaKnown RBP11.35□□□□□ -0.59
VPS8-227ENST00000625842 SLC8A1P32418 973 aa11.35□□□□□ -0.59
VPS8-227ENST00000625842 BOP1Q14137 746 aaKnown RBP11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms