RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 IPO4Q8TEX9 1081 aaKnown RBP5.04□□□□□ -1.6
BRCA1-229ENST00000621897 MSI2Q96DH6 328 aaKnown RBP5.04□□□□□ -1.6
BRCA1-229ENST00000621897 CAMK1GQ96NX5 476 aa5.04□□□□□ -1.6
BRCA1-229ENST00000621897 PIMREGQ9BSJ6 248 aa5.04□□□□□ -1.6
BRCA1-229ENST00000621897 EPS8L2Q9H6S3 715 aa5.04□□□□□ -1.6
BRCA1-229ENST00000621897 CERS4Q9HA82 394 aa5.04□□□□□ -1.6
BRCA1-229ENST00000621897 SEMA4BQ9NPR2 832 aaPredicted RBP5.04□□□□□ -1.6
BRCA1-229ENST00000621897 MSRB1Q9NZV6 116 aa5.04□□□□□ -1.6
BRCA1-229ENST00000621897 COG5Q9UP83 839 aa5.04□□□□□ -1.6
BRCA1-229ENST00000621897 SQORQ9Y6N5 450 aa5.04□□□□□ -1.6
BRCA1-229ENST00000621897 SPATA31A5Q5VU36 1347 aa5.03□□□□□ -1.6
BRCA1-229ENST00000621897 EMSYQ7Z589 1322 aa5.03□□□□□ -1.6
BRCA1-229ENST00000621897 SPATA31A7Q8IWB4 1347 aa5.03□□□□□ -1.6
BRCA1-229ENST00000621897 PNMA6EA0A0J9YXQ4 647 aa5.03□□□□□ -1.6
BRCA1-229ENST00000621897 F8W810 466 aa5.03□□□□□ -1.6
BRCA1-229ENST00000621897 TULP3O75386 442 aa5.03□□□□□ -1.6
BRCA1-229ENST00000621897 ENO1P06733 434 aaKnown RBP5.03□□□□□ -1.6
BRCA1-229ENST00000621897 RFPL3SP0C7P2 107 aa5.03□□□□□ -1.6
BRCA1-229ENST00000621897 SCP2P22307 547 aa5.03□□□□□ -1.6
BRCA1-229ENST00000621897 GRM4Q14833 912 aa5.03□□□□□ -1.6
BRCA1-229ENST00000621897 MIDNQ504T8 468 aa5.03□□□□□ -1.6
BRCA1-229ENST00000621897 ZNF474Q6S9Z5 364 aaPredicted RBP5.03□□□□□ -1.6
BRCA1-229ENST00000621897 PIM3Q86V86 326 aa5.03□□□□□ -1.6
BRCA1-229ENST00000621897 NSMCE1Q8WV22 266 aa5.03□□□□□ -1.6
BRCA1-229ENST00000621897 CCDC138Q96M89 665 aa5.03□□□□□ -1.6
BRCA1-229ENST00000621897 PAAF1Q9BRP4 392 aa5.03□□□□□ -1.6
BRCA1-229ENST00000621897 WDR26Q9H7D7 661 aa5.03□□□□□ -1.6
BRCA1-229ENST00000621897 KCNK9Q9NPC2 374 aa5.03□□□□□ -1.6
BRCA1-229ENST00000621897 NECTIN3Q9NQS3 549 aa5.03□□□□□ -1.6
BRCA1-229ENST00000621897 PAPOLBQ9NRJ5 636 aaKnown RBP5.03□□□□□ -1.6
BRCA1-229ENST00000621897 FBXO28Q9NVF7 368 aa5.03□□□□□ -1.6
BRCA1-229ENST00000621897 FAM90A10PA6NDY2 464 aa5.02□□□□□ -1.61
BRCA1-229ENST00000621897 B4DGG1 531 aa5.02□□□□□ -1.61
BRCA1-229ENST00000621897 M0QYT0 321 aa5.02□□□□□ -1.61
BRCA1-229ENST00000621897 USP12O75317 370 aa5.02□□□□□ -1.61
BRCA1-229ENST00000621897 NTSR2O95665 410 aa5.02□□□□□ -1.61
BRCA1-229ENST00000621897 NBPF7P0C2Y1 421 aaPredicted RBP5.02□□□□□ -1.61
BRCA1-229ENST00000621897 SNHG28P0DPA3 235 aa5.02□□□□□ -1.61
BRCA1-229ENST00000621897 PEPDP12955 493 aa5.02□□□□□ -1.61
BRCA1-229ENST00000621897 AKR1A1P14550 325 aa5.02□□□□□ -1.61
BRCA1-229ENST00000621897 AK2P54819 239 aa5.02□□□□□ -1.61
BRCA1-229ENST00000621897 CSHL1Q14406 222 aa5.02□□□□□ -1.61
BRCA1-229ENST00000621897 ODF3L2Q3SX64 289 aa5.02□□□□□ -1.61
BRCA1-229ENST00000621897 ANXA2RQ3ZCQ2 193 aa5.02□□□□□ -1.61
BRCA1-229ENST00000621897 C11orf96Q7Z7L8 435 aa5.02□□□□□ -1.61
BRCA1-229ENST00000621897 ZFPM2Q8WW38 1151 aa5.02□□□□□ -1.61
BRCA1-229ENST00000621897 TUBB6Q9BUF5 446 aa5.02□□□□□ -1.61
BRCA1-229ENST00000621897 TRIM2Q9C040 744 aa5.02□□□□□ -1.61
BRCA1-229ENST00000621897 FAM234AQ9H0X4 552 aa5.02□□□□□ -1.61
BRCA1-229ENST00000621897 ARNT2Q9HBZ2 717 aa5.02□□□□□ -1.61
BRCA1-229ENST00000621897 IGSF9Q9P2J2 1179 aa5.02□□□□□ -1.61
BRCA1-229ENST00000621897 CA14Q9ULX7 337 aa5.02□□□□□ -1.61
BRCA1-229ENST00000621897 PCDHA12Q9UN75 941 aa5.02□□□□□ -1.61
BRCA1-229ENST00000621897 UBE2J1Q9Y385 318 aaPredicted RBP5.02□□□□□ -1.61
BRCA1-229ENST00000621897 CEP83Q9Y592 693 aa5.02□□□□□ -1.61
BRCA1-229ENST00000621897 LOC105369274A0A096LPK9 316 aa5.01□□□□□ -1.61
BRCA1-229ENST00000621897 LOC102723532A0A0G2JNH3 316 aa5.01□□□□□ -1.61
BRCA1-229ENST00000621897 IGLV5-39A0A0G2JS06 123 aa5.01□□□□□ -1.61
BRCA1-229ENST00000621897 PLA2G6O60733 806 aa5.01□□□□□ -1.61
BRCA1-229ENST00000621897 PPP6R2O75170 966 aa5.01□□□□□ -1.61
BRCA1-229ENST00000621897 NDUFB8O95169 186 aa5.01□□□□□ -1.61
BRCA1-229ENST00000621897 EPN2O95208 641 aa5.01□□□□□ -1.61
BRCA1-229ENST00000621897 CER1O95813 267 aa5.01□□□□□ -1.61
BRCA1-229ENST00000621897 CRYABP02511 175 aaKnown RBP5.01□□□□□ -1.61
BRCA1-229ENST00000621897 ABCB4P21439 1286 aa5.01□□□□□ -1.61
BRCA1-229ENST00000621897 KLRK1P26718 216 aa5.01□□□□□ -1.61
BRCA1-229ENST00000621897 SLC37A1P57057 533 aa5.01□□□□□ -1.61
BRCA1-229ENST00000621897 RAPGEF1Q13905 1077 aa5.01□□□□□ -1.61
BRCA1-229ENST00000621897 CBFBQ13951 182 aa5.01□□□□□ -1.61
BRCA1-229ENST00000621897 LIPMQ5VYY2 423 aa5.01□□□□□ -1.61
BRCA1-229ENST00000621897 ZDHHC17Q8IUH5 632 aa5.01□□□□□ -1.61
BRCA1-229ENST00000621897 OR4N4Q8N0Y3 316 aa5.01□□□□□ -1.61
BRCA1-229ENST00000621897 PELI3Q8N2H9 469 aa5.01□□□□□ -1.61
BRCA1-229ENST00000621897 SLC44A5Q8NCS7 719 aa5.01□□□□□ -1.61
BRCA1-229ENST00000621897 KAT2BQ92831 832 aa5.01□□□□□ -1.61
BRCA1-229ENST00000621897 SLC25A28Q96A46 364 aa5.01□□□□□ -1.61
BRCA1-229ENST00000621897 EME1Q96AY2 570 aa5.01□□□□□ -1.61
BRCA1-229ENST00000621897 SGCZQ96LD1 299 aa5.01□□□□□ -1.61
BRCA1-229ENST00000621897 ZNF347Q96SE7 839 aa5.01□□□□□ -1.61
BRCA1-229ENST00000621897 CHMP4AQ9BY43 222 aa5.01□□□□□ -1.61
BRCA1-229ENST00000621897 STK33Q9BYT3 514 aa5.01□□□□□ -1.61
BRCA1-229ENST00000621897 AAMDCQ9H7C9 122 aa5.01□□□□□ -1.61
BRCA1-229ENST00000621897 HELLSQ9NRZ9 838 aa5.01□□□□□ -1.61
BRCA1-229ENST00000621897 THSD1Q9NS62 852 aa5.01□□□□□ -1.61
BRCA1-229ENST00000621897 TM7SF3Q9NS93 570 aa5.01□□□□□ -1.61
BRCA1-229ENST00000621897 GEMIN8Q9NWZ8 242 aaKnown RBP5.01□□□□□ -1.61
BRCA1-229ENST00000621897 AGO2Q9UKV8 859 aaKnown RBP5.01□□□□□ -1.61
BRCA1-229ENST00000621897 SLC39A10Q9ULF5 831 aa5.01□□□□□ -1.61
BRCA1-229ENST00000621897 TMEM272A0A1B0GTI8 110 aa5□□□□□ -1.61
BRCA1-229ENST00000621897 IKBKBO14920 756 aa5□□□□□ -1.61
BRCA1-229ENST00000621897 HNRNPDLO14979 420 aaKnown RBP5□□□□□ -1.61
BRCA1-229ENST00000621897 PIP5K1BO14986 540 aa5□□□□□ -1.61
BRCA1-229ENST00000621897 ATG13O75143 517 aa5□□□□□ -1.61
BRCA1-229ENST00000621897 CAND2O75155 1236 aa5□□□□□ -1.61
BRCA1-229ENST00000621897 OAZ2O95190 189 aa5□□□□□ -1.61
BRCA1-229ENST00000621897 GLP2RO95838 553 aa5□□□□□ -1.61
BRCA1-229ENST00000621897 WNT1P04628 370 aa5□□□□□ -1.61
BRCA1-229ENST00000621897 ALPLP05186 524 aa5□□□□□ -1.61
BRCA1-229ENST00000621897 ANXA6P08133 673 aa5□□□□□ -1.61
BRCA1-229ENST00000621897 HTR6P50406 440 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 314.6 ms