RNA–Protein interactions for RNA: ENST00000621150.3

TNFAIP3-211, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 1,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-211ENST00000621150 SYPL2Q5VXT5 272 aa12.88□□□□□ -0.35
TNFAIP3-211ENST00000621150 KAZNQ674X7 775 aa12.88□□□□□ -0.35
TNFAIP3-211ENST00000621150 RHBDF2Q6PJF5 856 aa12.88□□□□□ -0.35
TNFAIP3-211ENST00000621150 BEND5Q7L4P6 421 aa12.88□□□□□ -0.35
TNFAIP3-211ENST00000621150 TMEM173Q86WV6 379 aaPredicted RBP12.88□□□□□ -0.35
TNFAIP3-211ENST00000621150 SIX6OS1Q8N1H7 587 aa12.88□□□□□ -0.35
TNFAIP3-211ENST00000621150 KCTD6Q8NC69 237 aa12.88□□□□□ -0.35
TNFAIP3-211ENST00000621150 GRK7Q8WTQ7 553 aa12.88□□□□□ -0.35
TNFAIP3-211ENST00000621150 BCL7CQ8WUZ0 217 aaPredicted RBP12.88□□□□□ -0.35
TNFAIP3-211ENST00000621150 HSPH1Q92598 858 aa12.88□□□□□ -0.35
TNFAIP3-211ENST00000621150 ART4Q93070 314 aa12.88□□□□□ -0.35
TNFAIP3-211ENST00000621150 FUBP3Q96I24 572 aaKnown RBP eCLIP12.88□□□□□ -0.35
TNFAIP3-211ENST00000621150 CDCA3Q99618 268 aaPredicted RBP12.88□□□□□ -0.35
TNFAIP3-211ENST00000621150 FAM118BQ9BPY3 351 aa12.88□□□□□ -0.35
TNFAIP3-211ENST00000621150 ZNF670Q9BS34 389 aa12.88□□□□□ -0.35
TNFAIP3-211ENST00000621150 ENTPD7Q9NQZ7 604 aa12.88□□□□□ -0.35
TNFAIP3-211ENST00000621150 FEZ2Q9UHY8 353 aaPredicted RBP12.88□□□□□ -0.35
TNFAIP3-211ENST00000621150 FAM86C2PA6NEL3 165 aa12.88□□□□□ -0.35
TNFAIP3-211ENST00000621150 APOC4-APOC2K7ER74 178 aa12.88□□□□□ -0.35
TNFAIP3-211ENST00000621150 CST8O60676 142 aa12.88□□□□□ -0.35
TNFAIP3-211ENST00000621150 TADA2AO75478 443 aa12.88□□□□□ -0.35
TNFAIP3-211ENST00000621150 ZBED1O96006 694 aa12.88□□□□□ -0.35
TNFAIP3-211ENST00000621150 APOC2P02655 101 aa12.88□□□□□ -0.35
TNFAIP3-211ENST00000621150 ALDH2P05091 517 aa12.88□□□□□ -0.35
TNFAIP3-211ENST00000621150 ITGAVP06756 1048 aa12.88□□□□□ -0.35
TNFAIP3-211ENST00000621150 ALADP13716 330 aa12.88□□□□□ -0.35
TNFAIP3-211ENST00000621150 L1CAMP32004 1257 aa12.88□□□□□ -0.35
TNFAIP3-211ENST00000621150 CDH6P55285 790 aa12.88□□□□□ -0.35
TNFAIP3-211ENST00000621150 DAB2P98082 770 aa12.88□□□□□ -0.35
TNFAIP3-211ENST00000621150 MMRN1Q13201 1228 aa12.88□□□□□ -0.35
TNFAIP3-211ENST00000621150 EIF4EBP2Q13542 120 aaPredicted RBP12.88□□□□□ -0.35
TNFAIP3-211ENST00000621150 BYSLQ13895 437 aaKnown RBP12.88□□□□□ -0.35
TNFAIP3-211ENST00000621150 ERMARDQ5T6L9 678 aa12.88□□□□□ -0.35
TNFAIP3-211ENST00000621150 SLC9A4Q6AI14 798 aa12.88□□□□□ -0.35
TNFAIP3-211ENST00000621150 C4orf50Q6ZRC1 276 aa12.88□□□□□ -0.35
TNFAIP3-211ENST00000621150 PSTKQ8IV42 348 aaKnown RBP12.88□□□□□ -0.35
TNFAIP3-211ENST00000621150 IQCKQ8N0W5 287 aa12.88□□□□□ -0.35
TNFAIP3-211ENST00000621150 KRT222Q8N1A0 295 aa12.88□□□□□ -0.35
TNFAIP3-211ENST00000621150 ALLCQ8N6M5 410 aa12.88□□□□□ -0.35
TNFAIP3-211ENST00000621150 PQLC3Q8N755 202 aa12.88□□□□□ -0.35
TNFAIP3-211ENST00000621150 FBXO25Q8TCJ0 367 aa12.88□□□□□ -0.35
TNFAIP3-211ENST00000621150 FAM149B1Q96BN6 582 aa12.88□□□□□ -0.35
TNFAIP3-211ENST00000621150 RNF157Q96PX1 679 aa12.88□□□□□ -0.35
TNFAIP3-211ENST00000621150 COLEC11Q9BWP8 271 aa12.88□□□□□ -0.35
TNFAIP3-211ENST00000621150 TRIM31Q9BZY9 425 aa12.88□□□□□ -0.35
TNFAIP3-211ENST00000621150 WDR6Q9NNW5 1121 aaKnown RBP12.88□□□□□ -0.35
TNFAIP3-211ENST00000621150 WHRNQ9P202 907 aa12.88□□□□□ -0.35
TNFAIP3-211ENST00000621150 OR6C75A6NL08 312 aa12.87□□□□□ -0.35
TNFAIP3-211ENST00000621150 H3BQF6 201 aa12.87□□□□□ -0.35
TNFAIP3-211ENST00000621150 PPFIA2O75334 1257 aa12.87□□□□□ -0.35
TNFAIP3-211ENST00000621150 LTFP02788 710 aa12.87□□□□□ -0.35
TNFAIP3-211ENST00000621150 OR4Q2P0C623 313 aa12.87□□□□□ -0.35
TNFAIP3-211ENST00000621150 USP17L7P0C7H9 530 aa12.87□□□□□ -0.35
TNFAIP3-211ENST00000621150 TNNT3P45378 269 aaPredicted RBP12.87□□□□□ -0.35
TNFAIP3-211ENST00000621150 OTUD4Q01804 1114 aaKnown RBP12.87□□□□□ -0.35
TNFAIP3-211ENST00000621150 HLTFQ14527 1009 aaKnown RBP eCLIP12.87□□□□□ -0.359e-6■□□□□ 9.4
TNFAIP3-211ENST00000621150 UAP1Q16222 522 aaPredicted RBP12.87□□□□□ -0.35
TNFAIP3-211ENST00000621150 ZFYVE27Q5T4F4 411 aa12.87□□□□□ -0.35
TNFAIP3-211ENST00000621150 FUT10Q6P4F1 479 aa12.87□□□□□ -0.35
TNFAIP3-211ENST00000621150 TMEM184AQ6ZMB5 413 aa12.87□□□□□ -0.35
TNFAIP3-211ENST00000621150 TMC3Q7Z5M5 1100 aa12.87□□□□□ -0.35
TNFAIP3-211ENST00000621150 CCDC185Q8N715 623 aa12.87□□□□□ -0.35
TNFAIP3-211ENST00000621150 PLD5Q8N7P1 536 aa12.87□□□□□ -0.35
TNFAIP3-211ENST00000621150 MRPL43Q8N983 215 aaKnown RBP12.87□□□□□ -0.35
TNFAIP3-211ENST00000621150 PCDH19Q8TAB3 1148 aa12.87□□□□□ -0.35
TNFAIP3-211ENST00000621150 ACTL9Q8TC94 416 aa12.87□□□□□ -0.35
TNFAIP3-211ENST00000621150 GPATCH2LQ9NWQ4 482 aa12.87□□□□□ -0.35
TNFAIP3-211ENST00000621150 FZD10Q9ULW2 581 aa12.87□□□□□ -0.35
TNFAIP3-211ENST00000621150 NAALADL1Q9UQQ1 740 aa12.87□□□□□ -0.35
TNFAIP3-211ENST00000621150 FAN1Q9Y2M0 1017 aa12.87□□□□□ -0.35
TNFAIP3-211ENST00000621150 USP15Q9Y4E8 981 aaPredicted RBP12.87□□□□□ -0.35
TNFAIP3-211ENST00000621150 PCDHGA11Q9Y5H2 935 aa12.87□□□□□ -0.35
TNFAIP3-211ENST00000621150 SF3B1O75533 1304 aaKnown RBP eCLIP12.87□□□□□ -0.35
TNFAIP3-211ENST00000621150 C2orf71A6NGG8 1288 aa12.86□□□□□ -0.35
TNFAIP3-211ENST00000621150 I6L893 689 aaPredicted RBP12.86□□□□□ -0.35
TNFAIP3-211ENST00000621150 DCXO43602 365 aa12.86□□□□□ -0.35
TNFAIP3-211ENST00000621150 VNN2O95498 520 aa12.86□□□□□ -0.35
TNFAIP3-211ENST00000621150 GAS8O95995 478 aa12.86□□□□□ -0.35
TNFAIP3-211ENST00000621150 IGLV3-25P01717 112 aa12.86□□□□□ -0.35
TNFAIP3-211ENST00000621150 PECAM1P16284 738 aaPredicted RBP12.86□□□□□ -0.35
TNFAIP3-211ENST00000621150 DESP17661 470 aa12.86□□□□□ -0.35
TNFAIP3-211ENST00000621150 CYP2F1P24903 491 aa12.86□□□□□ -0.35
TNFAIP3-211ENST00000621150 RDXP35241 583 aaKnown RBP12.86□□□□□ -0.35
TNFAIP3-211ENST00000621150 MAGEA11P43364 429 aa12.86□□□□□ -0.35
TNFAIP3-211ENST00000621150 MAPK8P45983 427 aa12.86□□□□□ -0.35
TNFAIP3-211ENST00000621150 SULT1E1P49888 294 aa12.86□□□□□ -0.35
TNFAIP3-211ENST00000621150 LMNB2Q03252 620 aa12.86□□□□□ -0.35
TNFAIP3-211ENST00000621150 SCAPQ12770 1279 aa12.86□□□□□ -0.35
TNFAIP3-211ENST00000621150 ELAVL2Q12926 359 aaKnown RBP12.86□□□□□ -0.35
TNFAIP3-211ENST00000621150 NOMO1Q15155 1222 aa12.86□□□□□ -0.35
TNFAIP3-211ENST00000621150 NFE2Q16621 373 aaPredicted RBP12.86□□□□□ -0.35
TNFAIP3-211ENST00000621150 SLC39A12Q504Y0 691 aa12.86□□□□□ -0.35
TNFAIP3-211ENST00000621150 DCAF6Q58WW2 860 aa12.86□□□□□ -0.35
TNFAIP3-211ENST00000621150 ODF2Q5BJF6 829 aa12.86□□□□□ -0.35
TNFAIP3-211ENST00000621150 SPDYCQ5MJ68 293 aa12.86□□□□□ -0.35
TNFAIP3-211ENST00000621150 FAM171A1Q5VUB5 890 aa12.86□□□□□ -0.35
TNFAIP3-211ENST00000621150 SCYL2Q6P3W7 929 aa12.86□□□□□ -0.35
TNFAIP3-211ENST00000621150 SPATA2LQ8IUW3 424 aaPredicted RBP12.86□□□□□ -0.35
TNFAIP3-211ENST00000621150 DCP1BQ8IZD4 617 aaKnown RBP12.86□□□□□ -0.35
TNFAIP3-211ENST00000621150 GLIS1Q8NBF1 620 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms