RNA–Protein interactions for RNA: ENST00000621016.4

CDH1-214, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 3,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-214ENST00000621016 ZNFX1Q9P2E3 1918 aaKnown RBP11.03□□□□□ -0.64
CDH1-214ENST00000621016 BRWD3Q6RI45 1802 aa11.03□□□□□ -0.64
CDH1-214ENST00000621016 NFASCO94856 1347 aa11.03□□□□□ -0.64
CDH1-214ENST00000621016 NOTOA8MTQ0 251 aa11.03□□□□□ -0.64
CDH1-214ENST00000621016 COPEO14579 308 aa11.03□□□□□ -0.64
CDH1-214ENST00000621016 TEX28O15482 410 aa11.03□□□□□ -0.64
CDH1-214ENST00000621016 DCTN3O75935 186 aa11.03□□□□□ -0.64
CDH1-214ENST00000621016 T-ENOLP0DO92 83 aa11.03□□□□□ -0.64
CDH1-214ENST00000621016 LCP1P13796 627 aa11.03□□□□□ -0.64
CDH1-214ENST00000621016 ADORA2BP29275 332 aa11.03□□□□□ -0.64
CDH1-214ENST00000621016 SERPINB8P50452 374 aa11.03□□□□□ -0.64
CDH1-214ENST00000621016 RABGGTBP53611 331 aa11.03□□□□□ -0.64
CDH1-214ENST00000621016 EMP3P54852 163 aa11.03□□□□□ -0.64
CDH1-214ENST00000621016 RNF43Q68DV7 783 aa11.03□□□□□ -0.64
CDH1-214ENST00000621016 ARID3BQ8IVW6 561 aaPredicted RBP11.03□□□□□ -0.64
CDH1-214ENST00000621016 REM2Q8IYK8 340 aaPredicted RBP11.03□□□□□ -0.64
CDH1-214ENST00000621016 HACE1Q8IYU2 909 aa11.03□□□□□ -0.64
CDH1-214ENST00000621016 SLC4A11Q8NBS3 891 aa11.03□□□□□ -0.64
CDH1-214ENST00000621016 C7orf57Q8NEG2 295 aa11.03□□□□□ -0.64
CDH1-214ENST00000621016 GSDMBQ8TAX9 411 aa11.03□□□□□ -0.64
CDH1-214ENST00000621016 GBA3Q9H227 469 aa11.03□□□□□ -0.64
CDH1-214ENST00000621016 TSPAN16Q9UKR8 245 aa11.03□□□□□ -0.64
CDH1-214ENST00000621016 STRIP2Q9ULQ0 834 aa11.03□□□□□ -0.64
CDH1-214ENST00000621016 C19orf81C9J6K1 198 aa11.02□□□□□ -0.64
CDH1-214ENST00000621016 TYROBPO43914 113 aa11.02□□□□□ -0.64
CDH1-214ENST00000621016 ARL1P40616 181 aaPredicted RBP11.02□□□□□ -0.64
CDH1-214ENST00000621016 ABCG1P45844 678 aa11.02□□□□□ -0.64
CDH1-214ENST00000621016 GTF2A2P52657 109 aa11.02□□□□□ -0.64
CDH1-214ENST00000621016 ZNF132P52740 706 aa11.02□□□□□ -0.64
CDH1-214ENST00000621016 IER5Q5VY09 327 aa11.02□□□□□ -0.64
CDH1-214ENST00000621016 C16orf46Q6P387 395 aa11.02□□□□□ -0.64
CDH1-214ENST00000621016 TRMT10BQ6PF06 316 aaKnown RBP11.02□□□□□ -0.64
CDH1-214ENST00000621016 METTL7BQ6UX53 244 aa11.02□□□□□ -0.64
CDH1-214ENST00000621016 OR6B3Q8NGW1 331 aa11.02□□□□□ -0.64
CDH1-214ENST00000621016 PPP4R1Q8TF05 950 aa11.02□□□□□ -0.64
CDH1-214ENST00000621016 SH3TC2Q8TF17 1288 aa11.02□□□□□ -0.64
CDH1-214ENST00000621016 TMEM174Q8WUU8 243 aa11.02□□□□□ -0.64
CDH1-214ENST00000621016 NKD2Q969F2 451 aaPredicted RBP11.02□□□□□ -0.64
CDH1-214ENST00000621016 FAM149B1Q96BN6 582 aa11.02□□□□□ -0.64
CDH1-214ENST00000621016 TMEM176AQ96HP8 235 aa11.02□□□□□ -0.64
CDH1-214ENST00000621016 TMEM120AQ9BXJ8 343 aa11.02□□□□□ -0.64
CDH1-214ENST00000621016 XAB2Q9HCS7 855 aaKnown RBP11.02□□□□□ -0.64
CDH1-214ENST00000621016 TXNRD2Q9NNW7 524 aa11.02□□□□□ -0.64
CDH1-214ENST00000621016 SACM1LQ9NTJ5 587 aa11.02□□□□□ -0.64
CDH1-214ENST00000621016 DKK3Q9UBP4 350 aa11.02□□□□□ -0.64
CDH1-214ENST00000621016 STARD13Q9Y3M8 1113 aa11.02□□□□□ -0.64
CDH1-214ENST00000621016 PCDHGA8Q9Y5G5 932 aa11.02□□□□□ -0.64
CDH1-214ENST00000621016 CSADQ9Y600 493 aa11.02□□□□□ -0.64
CDH1-214ENST00000621016 SNCAIPQ9Y6H5 919 aa11.02□□□□□ -0.64
CDH1-214ENST00000621016 KIF13BQ9NQT8 1826 aa11.02□□□□□ -0.65
CDH1-214ENST00000621016 MED7O43513 233 aa11.02□□□□□ -0.65
CDH1-214ENST00000621016 TCEA3O75764 348 aa11.02□□□□□ -0.65
CDH1-214ENST00000621016 ESRRAP11474 423 aaPredicted RBP11.02□□□□□ -0.65
CDH1-214ENST00000621016 ALDH18A1P54886 795 aaKnown RBP11.02□□□□□ -0.65
CDH1-214ENST00000621016 SESN2P58004 480 aaPredicted RBP11.02□□□□□ -0.65
CDH1-214ENST00000621016 EML3Q32P44 896 aa11.02□□□□□ -0.65
CDH1-214ENST00000621016 ZPBP2Q6X784 338 aa11.02□□□□□ -0.65
CDH1-214ENST00000621016 FAM183BPQ6ZVS7 135 aa11.02□□□□□ -0.65
CDH1-214ENST00000621016 CLNKQ7Z7G1 428 aa11.02□□□□□ -0.65
CDH1-214ENST00000621016 NAT8LQ8N9F0 302 aa11.02□□□□□ -0.65
CDH1-214ENST00000621016 Q8N9G6 341 aaPredicted RBP11.02□□□□□ -0.65
CDH1-214ENST00000621016 CLEC4CQ8WTT0 213 aa11.02□□□□□ -0.65
CDH1-214ENST00000621016 GRAMD1AQ96CP6 724 aa11.02□□□□□ -0.65
CDH1-214ENST00000621016 KIF12Q96FN5 646 aa11.02□□□□□ -0.65
CDH1-214ENST00000621016 CLPTM1LQ96KA5 538 aa11.02□□□□□ -0.65
CDH1-214ENST00000621016 PPP1R36Q96LQ0 422 aa11.02□□□□□ -0.65
CDH1-214ENST00000621016 NSMCE3Q96MG7 304 aa11.02□□□□□ -0.65
CDH1-214ENST00000621016 ZNF408Q9H9D4 720 aa11.02□□□□□ -0.65
CDH1-214ENST00000621016 KLK14Q9P0G3 267 aa11.02□□□□□ -0.65
CDH1-214ENST00000621016 DRG1Q9Y295 367 aaKnown RBP11.02□□□□□ -0.65
CDH1-214ENST00000621016 GPC6Q9Y625 555 aaPredicted RBP11.02□□□□□ -0.65
CDH1-214ENST00000621016 C3orf70A6NLC5 250 aaPredicted RBP11.02□□□□□ -0.65
CDH1-214ENST00000621016 PPEF2O14830 753 aa11.02□□□□□ -0.65
CDH1-214ENST00000621016 FBXO21O94952 628 aa11.02□□□□□ -0.65
CDH1-214ENST00000621016 LSM8O95777 96 aaKnown RBP11.02□□□□□ -0.65
CDH1-214ENST00000621016 INSRRP14616 1297 aa11.02□□□□□ -0.65
CDH1-214ENST00000621016 SAT1P21673 171 aa11.02□□□□□ -0.65
CDH1-214ENST00000621016 ENTPD1P49961 510 aa11.02□□□□□ -0.65
CDH1-214ENST00000621016 SLC34A1Q06495 639 aa11.02□□□□□ -0.65
CDH1-214ENST00000621016 KCTD2Q14681 263 aa11.02□□□□□ -0.65
CDH1-214ENST00000621016 CCDC142Q17RM4 750 aa11.02□□□□□ -0.65
CDH1-214ENST00000621016 KIZQ2M2Z5 673 aa11.02□□□□□ -0.65
CDH1-214ENST00000621016 RNF19BQ6ZMZ0 732 aa11.02□□□□□ -0.65
CDH1-214ENST00000621016 BBS12Q6ZW61 710 aa11.02□□□□□ -0.65
CDH1-214ENST00000621016 MPP5Q8N3R9 675 aa11.02□□□□□ -0.65
CDH1-214ENST00000621016 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.02□□□□□ -0.65
CDH1-214ENST00000621016 FAM172AQ8WUF8 416 aa11.02□□□□□ -0.65
CDH1-214ENST00000621016 C10orf82Q8WW14 230 aa11.02□□□□□ -0.65
CDH1-214ENST00000621016 MMP19Q99542 508 aa11.02□□□□□ -0.65
CDH1-214ENST00000621016 RETREG1Q9H6L5 497 aa11.02□□□□□ -0.65
CDH1-214ENST00000621016 TMPRSS4Q9NRS4 437 aa11.02□□□□□ -0.65
CDH1-214ENST00000621016 MFHAS1Q9Y4C4 1052 aa11.02□□□□□ -0.65
CDH1-214ENST00000621016 H3BRJ5 948 aa11.01□□□□□ -0.65
CDH1-214ENST00000621016 ADCY6O43306 1168 aa11.01□□□□□ -0.65
CDH1-214ENST00000621016 TRPA1O75762 1119 aa11.01□□□□□ -0.65
CDH1-214ENST00000621016 TRUB2O95900 331 aaKnown RBP11.01□□□□□ -0.65
CDH1-214ENST00000621016 MLLT3P42568 568 aaPredicted RBP11.01□□□□□ -0.65
CDH1-214ENST00000621016 NUMBP49757 651 aa11.01□□□□□ -0.65
CDH1-214ENST00000621016 GHRHRQ02643 423 aa11.01□□□□□ -0.65
CDH1-214ENST00000621016 MOGSQ13724 837 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms