RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 OR6B1O95007 311 aa20.14■□□□□ 0.82
PDLIM3-212ENST00000620787 NCF2P19878 526 aaPredicted RBP20.14■□□□□ 0.82
PDLIM3-212ENST00000620787 MTTPP55157 894 aa20.14■□□□□ 0.82
PDLIM3-212ENST00000620787 ABCE1P61221 599 aaKnown RBP20.14■□□□□ 0.82
PDLIM3-212ENST00000620787 CRADDP78560 199 aa20.14■□□□□ 0.82
PDLIM3-212ENST00000620787 FOLH1Q04609 750 aa20.14■□□□□ 0.82
PDLIM3-212ENST00000620787 SPATA24Q86W54 205 aa20.14■□□□□ 0.82
PDLIM3-212ENST00000620787 MIS12Q9H081 205 aa20.14■□□□□ 0.82
PDLIM3-212ENST00000620787 C2orf40Q9H1Z8 148 aa20.14■□□□□ 0.82
PDLIM3-212ENST00000620787 CYP3A43Q9HB55 503 aa20.14■□□□□ 0.82
PDLIM3-212ENST00000620787 PSAT1Q9Y617 370 aa20.14■□□□□ 0.82
PDLIM3-212ENST00000620787 C15orf38-AP3S2A0A0A6YYH1 394 aa20.14■□□□□ 0.81
PDLIM3-212ENST00000620787 TXNDC9O14530 226 aa20.14■□□□□ 0.81
PDLIM3-212ENST00000620787 COX4I1P13073 169 aa20.14■□□□□ 0.81
PDLIM3-212ENST00000620787 TCF7P36402 384 aaPredicted RBP20.14■□□□□ 0.81
PDLIM3-212ENST00000620787 SNAPC2Q13487 334 aa20.14■□□□□ 0.81
PDLIM3-212ENST00000620787 PABPC1LQ4VXU2 614 aaKnown RBP20.14■□□□□ 0.81
PDLIM3-212ENST00000620787 LCLAT1Q6UWP7 414 aa20.14■□□□□ 0.81
PDLIM3-212ENST00000620787 ARPINQ7Z6K5 226 aa20.14■□□□□ 0.81
PDLIM3-212ENST00000620787 ICA1LQ8NDH6 482 aa20.14■□□□□ 0.81
PDLIM3-212ENST00000620787 PIP4K2CQ8TBX8 421 aa20.14■□□□□ 0.81
PDLIM3-212ENST00000620787 ATP2A3Q93084 1043 aa20.14■□□□□ 0.81
PDLIM3-212ENST00000620787 QKIQ96PU8 341 aaKnown RBP eCLIP20.14■□□□□ 0.81
PDLIM3-212ENST00000620787 COPG2Q9UBF2 871 aa20.14■□□□□ 0.81
PDLIM3-212ENST00000620787 TSPAN16Q9UKR8 245 aa20.14■□□□□ 0.81
PDLIM3-212ENST00000620787 SSX2IPQ9Y2D8 614 aa20.14■□□□□ 0.81
PDLIM3-212ENST00000620787 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.13■□□□□ 0.81
PDLIM3-212ENST00000620787 LACTBL1A8MY62 500 aa20.13■□□□□ 0.81
PDLIM3-212ENST00000620787 ZBTB14O43829 449 aa20.13■□□□□ 0.81
PDLIM3-212ENST00000620787 EGFRP00533 1210 aa20.13■□□□□ 0.81
PDLIM3-212ENST00000620787 PRDX6P30041 224 aa20.13■□□□□ 0.81
PDLIM3-212ENST00000620787 RGS7P49802 495 aa20.13■□□□□ 0.81
PDLIM3-212ENST00000620787 GRAMD1BQ3KR37 738 aa20.13■□□□□ 0.81
PDLIM3-212ENST00000620787 JADE1Q6IE81 842 aa20.13■□□□□ 0.81
PDLIM3-212ENST00000620787 OLFML1Q6UWY5 402 aa20.13■□□□□ 0.81
PDLIM3-212ENST00000620787 TMC7Q7Z402 723 aa20.13■□□□□ 0.81
PDLIM3-212ENST00000620787 ZNF280CQ8ND82 737 aa20.13■□□□□ 0.81
PDLIM3-212ENST00000620787 KHSRPQ92945 711 aaKnown RBP eCLIP20.13■□□□□ 0.81
PDLIM3-212ENST00000620787 FZD8Q9H461 694 aa20.13■□□□□ 0.81
PDLIM3-212ENST00000620787 TMEM216Q9P0N5 145 aa20.13■□□□□ 0.81
PDLIM3-212ENST00000620787 INPP5FQ9Y2H2 1132 aa20.13■□□□□ 0.81
PDLIM3-212ENST00000620787 ZNF487B1APH4 448 aa20.13■□□□□ 0.81
PDLIM3-212ENST00000620787 ZBTB42B2RXF5 422 aa20.13■□□□□ 0.81
PDLIM3-212ENST00000620787 DCXO43602 365 aa20.13■□□□□ 0.81
PDLIM3-212ENST00000620787 ITGA2BP08514 1039 aa20.13■□□□□ 0.81
PDLIM3-212ENST00000620787 GMPRP36959 345 aa20.13■□□□□ 0.81
PDLIM3-212ENST00000620787 CXCL9Q07325 125 aa20.13■□□□□ 0.81
PDLIM3-212ENST00000620787 STILQ15468 1287 aa20.13■□□□□ 0.81
PDLIM3-212ENST00000620787 PPM1JQ5JR12 505 aa20.13■□□□□ 0.81
PDLIM3-212ENST00000620787 KCNT2Q6UVM3 1135 aa20.13■□□□□ 0.81
PDLIM3-212ENST00000620787 DNERQ8NFT8 737 aa20.13■□□□□ 0.81
PDLIM3-212ENST00000620787 VRTNQ9H8Y1 702 aa20.13■□□□□ 0.81
PDLIM3-212ENST00000620787 DTNAQ9Y4J8 743 aa20.13■□□□□ 0.81
PDLIM3-212ENST00000620787 CAPN8A6NHC0 703 aa20.12■□□□□ 0.81
PDLIM3-212ENST00000620787 ATP9BO43861 1147 aa20.12■□□□□ 0.81
PDLIM3-212ENST00000620787 GJB1P08034 283 aa20.12■□□□□ 0.81
PDLIM3-212ENST00000620787 RALBP11234 206 aa20.12■□□□□ 0.81
PDLIM3-212ENST00000620787 SDC4P31431 198 aa20.12■□□□□ 0.81
PDLIM3-212ENST00000620787 FDFT1P37268 417 aa20.12■□□□□ 0.81
PDLIM3-212ENST00000620787 NDST1P52848 882 aa20.12■□□□□ 0.81
PDLIM3-212ENST00000620787 SH3BGRP55822 239 aaPredicted RBP20.12■□□□□ 0.81
PDLIM3-212ENST00000620787 HDAC4P56524 1084 aa20.12■□□□□ 0.81
PDLIM3-212ENST00000620787 TLR1Q15399 786 aa20.12■□□□□ 0.81
PDLIM3-212ENST00000620787 INSCQ1MX18 579 aa20.12■□□□□ 0.81
PDLIM3-212ENST00000620787 TMEM132AQ24JP5 1023 aa20.12■□□□□ 0.81
PDLIM3-212ENST00000620787 LRRC23Q53EV4 343 aaPredicted RBP20.12■□□□□ 0.81
PDLIM3-212ENST00000620787 CASC4Q6P4E1 433 aa20.12■□□□□ 0.81
PDLIM3-212ENST00000620787 FAM81AQ8TBF8 368 aa20.12■□□□□ 0.81
PDLIM3-212ENST00000620787 CLMNQ96JQ2 1002 aa20.12■□□□□ 0.81
PDLIM3-212ENST00000620787 GCNAQ96QF7 691 aa20.12■□□□□ 0.81
PDLIM3-212ENST00000620787 IFT122Q9HBG6 1241 aa20.12■□□□□ 0.81
PDLIM3-212ENST00000620787 NDUFA13Q9P0J0 144 aa20.12■□□□□ 0.81
PDLIM3-212ENST00000620787 ATXN10Q9UBB4 475 aa20.12■□□□□ 0.81
PDLIM3-212ENST00000620787 ARHGAP26Q9UNA1 814 aa20.12■□□□□ 0.81
PDLIM3-212ENST00000620787 NR2E3Q9Y5X4 410 aa20.12■□□□□ 0.81
PDLIM3-212ENST00000620787 IGKV6-21A0A0C4DH24 114 aa20.12■□□□□ 0.81
PDLIM3-212ENST00000620787 F5H423 210 aaPredicted RBP20.12■□□□□ 0.81
PDLIM3-212ENST00000620787 STK10O94804 968 aaKnown RBP20.12■□□□□ 0.81
PDLIM3-212ENST00000620787 PGM3O95394 542 aa20.12■□□□□ 0.81
PDLIM3-212ENST00000620787 ALDH1A3P47895 512 aa20.12■□□□□ 0.81
PDLIM3-212ENST00000620787 ITGA9Q13797 1035 aa20.12■□□□□ 0.81
PDLIM3-212ENST00000620787 TNFAIP1Q13829 316 aa20.12■□□□□ 0.81
PDLIM3-212ENST00000620787 ARMC3Q5W041 872 aa20.12■□□□□ 0.81
PDLIM3-212ENST00000620787 MARVELD2Q8N4S9 558 aa20.12■□□□□ 0.81
PDLIM3-212ENST00000620787 CDKL2Q92772 493 aa20.12■□□□□ 0.81
PDLIM3-212ENST00000620787 C12orf42Q96LP6 360 aa20.12■□□□□ 0.81
PDLIM3-212ENST00000620787 KCNK16Q96T55 309 aa20.12■□□□□ 0.81
PDLIM3-212ENST00000620787 RNPEPQ9H4A4 650 aa20.12■□□□□ 0.81
PDLIM3-212ENST00000620787 QTRT2Q9H974 415 aaKnown RBP20.12■□□□□ 0.81
PDLIM3-212ENST00000620787 MTMR10Q9NXD2 777 aa20.12■□□□□ 0.81
PDLIM3-212ENST00000620787 CLIC5Q9NZA1 410 aa20.12■□□□□ 0.81
PDLIM3-212ENST00000620787 BARX2Q9UMQ3 279 aaPredicted RBP20.12■□□□□ 0.81
PDLIM3-212ENST00000620787 SCN4AP35499 1836 aa20.11■□□□□ 0.81
PDLIM3-212ENST00000620787 INO80B-WBP1J3KQ70 363 aa20.11■□□□□ 0.81
PDLIM3-212ENST00000620787 GPR25O00155 361 aa20.11■□□□□ 0.81
PDLIM3-212ENST00000620787 MLNP12872 115 aa20.11■□□□□ 0.81
PDLIM3-212ENST00000620787 TFE3P19532 575 aaPredicted RBP20.11■□□□□ 0.81
PDLIM3-212ENST00000620787 ACAT1P24752 427 aaKnown RBP20.11■□□□□ 0.81
PDLIM3-212ENST00000620787 ATICP31939 592 aa20.11■□□□□ 0.81
PDLIM3-212ENST00000620787 INCA1Q0VD86 236 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms