RNA–Protein interactions for RNA: ENST00000620709.4

CD40-207, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,522 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-207ENST00000620709 SDE2Q6IQ49 451 aa16.82■□□□□ 0.28
CD40-207ENST00000620709 NYAP1Q6ZVC0 841 aa16.82■□□□□ 0.28
CD40-207ENST00000620709 RSRC2Q7L4I2 434 aaKnown RBP16.82■□□□□ 0.28
CD40-207ENST00000620709 TRMT11Q7Z4G4 463 aaKnown RBP16.82■□□□□ 0.28
CD40-207ENST00000620709 VPS36Q86VN1 386 aa16.82■□□□□ 0.28
CD40-207ENST00000620709 FRMD1Q8N878 549 aa16.82■□□□□ 0.28
CD40-207ENST00000620709 SHC3Q92529 594 aa16.82■□□□□ 0.28
CD40-207ENST00000620709 PIGKQ92643 395 aa16.82■□□□□ 0.28
CD40-207ENST00000620709 KAT5Q92993 513 aa16.82■□□□□ 0.28
CD40-207ENST00000620709 EDEM2Q9BV94 578 aa16.82■□□□□ 0.28
CD40-207ENST00000620709 REXO2Q9Y3B8 237 aaKnown RBP16.82■□□□□ 0.28
CD40-207ENST00000620709 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.81■□□□□ 0.28
CD40-207ENST00000620709 FOXN3O00409 490 aaPredicted RBP16.81■□□□□ 0.28
CD40-207ENST00000620709 GREM1O60565 184 aa16.81■□□□□ 0.28
CD40-207ENST00000620709 HOXB2P14652 356 aa16.81■□□□□ 0.28
CD40-207ENST00000620709 PTK2Q05397 1052 aa16.81■□□□□ 0.28
CD40-207ENST00000620709 CUL2Q13617 745 aa16.81■□□□□ 0.28
CD40-207ENST00000620709 DNTTIP2Q5QJE6 756 aaKnown RBP16.81■□□□□ 0.28
CD40-207ENST00000620709 EGFLAMQ63HQ2 1017 aa16.81■□□□□ 0.28
CD40-207ENST00000620709 KIAA1328Q86T90 577 aa16.81■□□□□ 0.28
CD40-207ENST00000620709 PIGZQ86VD9 579 aa16.81■□□□□ 0.28
CD40-207ENST00000620709 TMEFF1Q8IYR6 380 aa16.81■□□□□ 0.28
CD40-207ENST00000620709 CHPFQ8IZ52 775 aa16.81■□□□□ 0.28
CD40-207ENST00000620709 DDX1Q92499 740 aaKnown RBP16.81■□□□□ 0.28
CD40-207ENST00000620709 ZBTB24O43167 697 aaPredicted RBP16.8■□□□□ 0.28
CD40-207ENST00000620709 STC2O76061 302 aa16.8■□□□□ 0.28
CD40-207ENST00000620709 TUBB4AP04350 444 aa16.8■□□□□ 0.28
CD40-207ENST00000620709 NTSR1P30989 418 aa16.8■□□□□ 0.28
CD40-207ENST00000620709 DGKGP49619 791 aa16.8■□□□□ 0.28
CD40-207ENST00000620709 TKTL1P51854 596 aa16.8■□□□□ 0.28
CD40-207ENST00000620709 LIMK1P53667 647 aa16.8■□□□□ 0.28
CD40-207ENST00000620709 YWHAGP61981 247 aaKnown RBP eCLIP16.8■□□□□ 0.28
CD40-207ENST00000620709 SLC18A3Q16572 532 aa16.8■□□□□ 0.28
CD40-207ENST00000620709 KLHDC10Q6PID8 442 aa16.8■□□□□ 0.28
CD40-207ENST00000620709 LPCAT2Q7L5N7 544 aa16.8■□□□□ 0.28
CD40-207ENST00000620709 ZNF571Q7Z3V5 609 aaPredicted RBP16.8■□□□□ 0.28
CD40-207ENST00000620709 FAM71AQ8IYT1 594 aa16.8■□□□□ 0.28
CD40-207ENST00000620709 ARHGAP18Q8N392 663 aa16.8■□□□□ 0.28
CD40-207ENST00000620709 TXLNBQ8N3L3 684 aa16.8■□□□□ 0.28
CD40-207ENST00000620709 NDRG1Q92597 394 aaKnown RBP16.8■□□□□ 0.28
CD40-207ENST00000620709 FAXDC2Q96IV6 333 aa16.8■□□□□ 0.28
CD40-207ENST00000620709 CDK5RAP1Q96SZ6 601 aaKnown RBP16.8■□□□□ 0.28
CD40-207ENST00000620709 LUC7LQ9NQ29 371 aaKnown RBP16.8■□□□□ 0.28
CD40-207ENST00000620709 HESX1Q9UBX0 185 aa16.8■□□□□ 0.28
CD40-207ENST00000620709 USP3Q9Y6I4 520 aa16.8■□□□□ 0.28
CD40-207ENST00000620709 NUP205Q92621 2012 aa16.8■□□□□ 0.28
CD40-207ENST00000620709 KHNYNO15037 678 aaKnown RBP16.8■□□□□ 0.28
CD40-207ENST00000620709 CACNG3O60359 315 aa16.8■□□□□ 0.28
CD40-207ENST00000620709 CHRM1P11229 460 aaPredicted RBP16.8■□□□□ 0.28
CD40-207ENST00000620709 TNNT1P13805 278 aa16.8■□□□□ 0.28
CD40-207ENST00000620709 CORO1AP31146 461 aaKnown RBP16.8■□□□□ 0.28
CD40-207ENST00000620709 USP8P40818 1118 aa16.8■□□□□ 0.28
CD40-207ENST00000620709 P2RY2P41231 377 aa16.8■□□□□ 0.28
CD40-207ENST00000620709 VAV2P52735 878 aa16.8■□□□□ 0.28
CD40-207ENST00000620709 YWHAEP62258 255 aaKnown RBP16.8■□□□□ 0.28
CD40-207ENST00000620709 GFPT1Q06210 699 aaPredicted RBP16.8■□□□□ 0.28
CD40-207ENST00000620709 BYSLQ13895 437 aaKnown RBP16.8■□□□□ 0.28
CD40-207ENST00000620709 SGO2Q562F6 1265 aa16.8■□□□□ 0.28
CD40-207ENST00000620709 ARHGAP17Q68EM7 881 aa16.8■□□□□ 0.28
CD40-207ENST00000620709 ZNF662Q6ZS27 426 aa16.8■□□□□ 0.28
CD40-207ENST00000620709 DEFB119Q8N690 84 aa16.8■□□□□ 0.28
CD40-207ENST00000620709 ANKRD52Q8NB46 1076 aa16.8■□□□□ 0.28
CD40-207ENST00000620709 OLIG1Q8TAK6 271 aa16.8■□□□□ 0.28
CD40-207ENST00000620709 UBA3Q8TBC4 463 aa16.8■□□□□ 0.28
CD40-207ENST00000620709 KCNV2Q8TDN2 545 aa16.8■□□□□ 0.28
CD40-207ENST00000620709 CNTNAP3BQ96NU0 1288 aa16.8■□□□□ 0.28
CD40-207ENST00000620709 ACOX2Q99424 681 aa16.8■□□□□ 0.28
CD40-207ENST00000620709 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.8■□□□□ 0.28
CD40-207ENST00000620709 CNTNAP3Q9BZ76 1288 aa16.8■□□□□ 0.28
CD40-207ENST00000620709 ULBP1Q9BZM6 244 aa16.8■□□□□ 0.28
CD40-207ENST00000620709 LRRC4Q9HBW1 653 aa16.8■□□□□ 0.28
CD40-207ENST00000620709 CLIC5Q9NZA1 410 aa16.8■□□□□ 0.28
CD40-207ENST00000620709 TSPAN16Q9UKR8 245 aa16.8■□□□□ 0.28
CD40-207ENST00000620709 STRIP2Q9ULQ0 834 aa16.8■□□□□ 0.28
CD40-207ENST00000620709 SLC12A8A0AV02 714 aa16.79■□□□□ 0.28
CD40-207ENST00000620709 C4orf47A7E2U8 309 aa16.79■□□□□ 0.28
CD40-207ENST00000620709 PATE3B3GLJ2 98 aa16.79■□□□□ 0.28
CD40-207ENST00000620709 PRRT4C9JH25 899 aa16.79■□□□□ 0.28
CD40-207ENST00000620709 TULP2O00295 520 aa16.79■□□□□ 0.28
CD40-207ENST00000620709 ADRB1P08588 477 aa16.79■□□□□ 0.28
CD40-207ENST00000620709 COG7P83436 770 aa16.79■□□□□ 0.28
CD40-207ENST00000620709 PDE4CQ08493 712 aa16.79■□□□□ 0.28
CD40-207ENST00000620709 SMYD5Q6GMV2 418 aa16.79■□□□□ 0.28
CD40-207ENST00000620709 Q6ZNB5 142 aa16.79■□□□□ 0.28
CD40-207ENST00000620709 DENND1CQ8IV53 801 aa16.79■□□□□ 0.28
CD40-207ENST00000620709 UBXN6Q9BZV1 441 aa16.79■□□□□ 0.28
CD40-207ENST00000620709 TSGA10Q9BZW7 698 aa16.79■□□□□ 0.28
CD40-207ENST00000620709 DCLK3Q9C098 648 aa16.79■□□□□ 0.28
CD40-207ENST00000620709 LZTFL1Q9NQ48 299 aa16.79■□□□□ 0.28
CD40-207ENST00000620709 MARK1Q9P0L2 795 aa16.79■□□□□ 0.28
CD40-207ENST00000620709 MARCH2Q9P0N8 246 aa16.79■□□□□ 0.28
CD40-207ENST00000620709 ADAMTS1Q9UHI8 967 aa16.79■□□□□ 0.28
CD40-207ENST00000620709 MBD1Q9UIS9 605 aaPredicted RBP16.79■□□□□ 0.28
CD40-207ENST00000620709 HCN2Q9UL51 889 aa16.79■□□□□ 0.28
CD40-207ENST00000620709 ZNF510Q9Y2H8 683 aa16.79■□□□□ 0.28
CD40-207ENST00000620709 RAD54BQ9Y620 910 aa16.79■□□□□ 0.28
CD40-207ENST00000620709 ZBED1O96006 694 aa16.78■□□□□ 0.28
CD40-207ENST00000620709 KLKB1P03952 638 aa16.78■□□□□ 0.28
CD40-207ENST00000620709 GABRG2P18507 467 aa16.78■□□□□ 0.28
CD40-207ENST00000620709 CACNA2D2Q9NY47 1150 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms