RNA–Protein interactions for RNA: ENST00000620675.4

NEK3-210, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-210ENST00000620675 PRICKLE1Q96MT3 831 aaPredicted RBP14.14□□□□□ -0.15
NEK3-210ENST00000620675 BRD9Q9H8M2 597 aa14.14□□□□□ -0.15
NEK3-210ENST00000620675 LUC7LQ9NQ29 371 aaKnown RBP14.14□□□□□ -0.15
NEK3-210ENST00000620675 IP6K2Q9UHH9 426 aa14.14□□□□□ -0.15
NEK3-210ENST00000620675 LSM7Q9UK45 103 aaKnown RBP14.14□□□□□ -0.15
NEK3-210ENST00000620675 GUCA1BQ9UMX6 200 aa14.14□□□□□ -0.15
NEK3-210ENST00000620675 CAPN6Q9Y6Q1 641 aa14.14□□□□□ -0.15
NEK3-210ENST00000620675 CHD5Q8TDI0 1954 aa14.13□□□□□ -0.15
NEK3-210ENST00000620675 A0A0A6YYK5 440 aaPredicted RBP14.13□□□□□ -0.15
NEK3-210ENST00000620675 CHADO15335 359 aa14.13□□□□□ -0.15
NEK3-210ENST00000620675 F9P00740 461 aa14.13□□□□□ -0.15
NEK3-210ENST00000620675 APOEP02649 317 aa14.13□□□□□ -0.15
NEK3-210ENST00000620675 ADRA1BP35368 520 aa14.13□□□□□ -0.15
NEK3-210ENST00000620675 KPNA1P52294 538 aaPredicted RBP14.13□□□□□ -0.15
NEK3-210ENST00000620675 SLC25A11Q02978 314 aaKnown RBP14.13□□□□□ -0.15
NEK3-210ENST00000620675 MESP2Q0VG99 397 aa14.13□□□□□ -0.15
NEK3-210ENST00000620675 KIF5AQ12840 1032 aa14.13□□□□□ -0.15
NEK3-210ENST00000620675 TDGQ13569 410 aa14.13□□□□□ -0.15
NEK3-210ENST00000620675 GAB4Q2WGN9 574 aa14.13□□□□□ -0.15
NEK3-210ENST00000620675 CC2D1AQ6P1N0 951 aaPredicted RBP14.13□□□□□ -0.15
NEK3-210ENST00000620675 CIR1Q86X95 450 aaPredicted RBP14.13□□□□□ -0.15
NEK3-210ENST00000620675 YAF2Q8IY57 180 aa14.13□□□□□ -0.15
NEK3-210ENST00000620675 E2F7Q96AV8 911 aa14.13□□□□□ -0.15
NEK3-210ENST00000620675 PRMT1Q99873 361 aaKnown RBP14.13□□□□□ -0.15
NEK3-210ENST00000620675 TRMT1Q9NXH9 659 aaKnown RBP14.13□□□□□ -0.15
NEK3-210ENST00000620675 CLEC4EQ9ULY5 219 aa14.13□□□□□ -0.15
NEK3-210ENST00000620675 USP18Q9UMW8 372 aa14.13□□□□□ -0.15
NEK3-210ENST00000620675 GRID2IPA4D2P6 1211 aa14.13□□□□□ -0.15
NEK3-210ENST00000620675 GFRA2O00451 464 aa14.13□□□□□ -0.15
NEK3-210ENST00000620675 GJC1P36383 396 aa14.13□□□□□ -0.15
NEK3-210ENST00000620675 IFNAR2P48551 515 aa14.13□□□□□ -0.15
NEK3-210ENST00000620675 HADHBP55084 474 aaKnown RBP14.13□□□□□ -0.15
NEK3-210ENST00000620675 PIGHQ14442 188 aaPredicted RBP14.13□□□□□ -0.15
NEK3-210ENST00000620675 ADGRF1Q5T601 910 aa14.13□□□□□ -0.15
NEK3-210ENST00000620675 SND1Q7KZF4 910 aaKnown RBP eCLIP14.13□□□□□ -0.15
NEK3-210ENST00000620675 UNC45BQ8IWX7 931 aa14.13□□□□□ -0.15
NEK3-210ENST00000620675 REXO1L1PQ8IX06 675 aa14.13□□□□□ -0.15
NEK3-210ENST00000620675 FAM217AQ8IXS0 508 aa14.13□□□□□ -0.15
NEK3-210ENST00000620675 CFAP52Q8N1V2 620 aa14.13□□□□□ -0.15
NEK3-210ENST00000620675 BTN2A3PQ96KV6 586 aa14.13□□□□□ -0.15
NEK3-210ENST00000620675 UHRF1Q96T88 793 aaPredicted RBP14.13□□□□□ -0.15
NEK3-210ENST00000620675 SNRNP25Q9BV90 132 aaKnown RBP14.13□□□□□ -0.15
NEK3-210ENST00000620675 ZWILCHQ9H900 591 aa14.13□□□□□ -0.15
NEK3-210ENST00000620675 KLHL11Q9NVR0 708 aa14.13□□□□□ -0.15
NEK3-210ENST00000620675 STOML2Q9UJZ1 356 aa14.13□□□□□ -0.15
NEK3-210ENST00000620675 FZD10Q9ULW2 581 aa14.13□□□□□ -0.15
NEK3-210ENST00000620675 BTNL10A8MVZ5 291 aa14.12□□□□□ -0.15
NEK3-210ENST00000620675 TRIM24O15164 1050 aa14.12□□□□□ -0.15
NEK3-210ENST00000620675 NRDCO43847 1150 aa14.12□□□□□ -0.15
NEK3-210ENST00000620675 RNF8O76064 485 aa14.12□□□□□ -0.15
NEK3-210ENST00000620675 TNNT1P13805 278 aa14.12□□□□□ -0.15
NEK3-210ENST00000620675 COMTP21964 271 aa14.12□□□□□ -0.15
NEK3-210ENST00000620675 SSR1P43307 286 aaKnown RBP14.12□□□□□ -0.15
NEK3-210ENST00000620675 MARCKSL1P49006 195 aa14.12□□□□□ -0.15
NEK3-210ENST00000620675 NAP1L1P55209 391 aaKnown RBP14.12□□□□□ -0.15
NEK3-210ENST00000620675 RPS24P62847 133 aaKnown RBP14.12□□□□□ -0.15
NEK3-210ENST00000620675 DHCR24Q15392 516 aa14.12□□□□□ -0.15
NEK3-210ENST00000620675 ARHGAP29Q52LW3 1261 aa14.12□□□□□ -0.15
NEK3-210ENST00000620675 BRMS1LQ5PSV4 323 aa14.12□□□□□ -0.15
NEK3-210ENST00000620675 C12orf40Q86WS4 652 aa14.12□□□□□ -0.15
NEK3-210ENST00000620675 LRRC57Q8N9N7 239 aa14.12□□□□□ -0.15
NEK3-210ENST00000620675 IGSF8Q969P0 613 aa14.12□□□□□ -0.15
NEK3-210ENST00000620675 NXPE3Q969Y0 559 aa14.12□□□□□ -0.15
NEK3-210ENST00000620675 DCLK3Q9C098 648 aa14.12□□□□□ -0.15
NEK3-210ENST00000620675 ECT2Q9H8V3 914 aa14.12□□□□□ -0.15
NEK3-210ENST00000620675 HEBP1Q9NRV9 189 aa14.12□□□□□ -0.15
NEK3-210ENST00000620675 VANGL2Q9ULK5 521 aa14.12□□□□□ -0.15
NEK3-210ENST00000620675 ALG6Q9Y672 507 aa14.12□□□□□ -0.15
NEK3-210ENST00000620675 SHISA7A6NL88 538 aa14.11□□□□□ -0.15
NEK3-210ENST00000620675 TACR2P21452 398 aa14.11□□□□□ -0.15
NEK3-210ENST00000620675 NUMBP49757 651 aa14.11□□□□□ -0.15
NEK3-210ENST00000620675 AUHQ13825 339 aaKnown RBP14.11□□□□□ -0.15
NEK3-210ENST00000620675 FBXL22Q6P050 247 aa14.11□□□□□ -0.15
NEK3-210ENST00000620675 SLFN11Q7Z7L1 901 aa14.11□□□□□ -0.15
NEK3-210ENST00000620675 CHSY1Q86X52 802 aa14.11□□□□□ -0.15
NEK3-210ENST00000620675 ZNF683Q8IZ20 524 aa14.11□□□□□ -0.15
NEK3-210ENST00000620675 ATP6V0D2Q8N8Y2 350 aa14.11□□□□□ -0.15
NEK3-210ENST00000620675 SPHK2Q9NRA0 654 aa14.11□□□□□ -0.15
NEK3-210ENST00000620675 THG1LQ9NWX6 298 aaKnown RBP14.11□□□□□ -0.15
NEK3-210ENST00000620675 SORCS3Q9UPU3 1222 aa14.11□□□□□ -0.15
NEK3-210ENST00000620675 NEU3Q9UQ49 428 aa14.11□□□□□ -0.15
NEK3-210ENST00000620675 SHROOM3Q8TF72 1996 aa14.11□□□□□ -0.15
NEK3-210ENST00000620675 ANTXRLA6NF34 631 aa14.11□□□□□ -0.15
NEK3-210ENST00000620675 RARAP10276 462 aa14.11□□□□□ -0.15
NEK3-210ENST00000620675 SLC2A3P11169 496 aa14.11□□□□□ -0.15
NEK3-210ENST00000620675 PCK1P35558 622 aa14.11□□□□□ -0.15
NEK3-210ENST00000620675 SLC11A2P49281 568 aa14.11□□□□□ -0.15
NEK3-210ENST00000620675 MLLT6P55198 1093 aaPredicted RBP14.11□□□□□ -0.15
NEK3-210ENST00000620675 RUNX3Q13761 415 aa14.11□□□□□ -0.15
NEK3-210ENST00000620675 TXNDC11Q6PKC3 985 aa14.11□□□□□ -0.15
NEK3-210ENST00000620675 DAAM2Q86T65 1068 aa14.11□□□□□ -0.15
NEK3-210ENST00000620675 LGI2Q8N0V4 545 aa14.11□□□□□ -0.15
NEK3-210ENST00000620675 NAT16Q8N8M0 369 aa14.11□□□□□ -0.15
NEK3-210ENST00000620675 WFDC5Q8TCV5 224 aa14.11□□□□□ -0.15
NEK3-210ENST00000620675 IRF7Q92985 503 aa14.11□□□□□ -0.15
NEK3-210ENST00000620675 KCTD15Q96SI1 283 aaPredicted RBP14.11□□□□□ -0.15
NEK3-210ENST00000620675 TBC1D14Q9P2M4 693 aa14.11□□□□□ -0.15
NEK3-210ENST00000620675 PACSIN2Q9UNF0 486 aaPredicted RBP14.11□□□□□ -0.15
NEK3-210ENST00000620675 DUSP12Q9UNI6 340 aa14.11□□□□□ -0.15
NEK3-210ENST00000620675 AP4E1Q9UPM8 1137 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms