RNA–Protein interactions for RNA: ENST00000620514.1

HMGN3-203, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 3 BASIC

Gene HMGN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-203ENST00000620514 SLC36A4Q6YBV0 504 aa17.84■□□□□ 0.45
HMGN3-203ENST00000620514 CHST9Q7L1S5 443 aa17.84■□□□□ 0.45
HMGN3-203ENST00000620514 FAM114A1Q8IWE2 563 aa17.84■□□□□ 0.45
HMGN3-203ENST00000620514 CYB5D2Q8WUJ1 264 aa17.84■□□□□ 0.45
HMGN3-203ENST00000620514 SLC39A13Q96H72 371 aa17.84■□□□□ 0.45
HMGN3-203ENST00000620514 PRICKLE1Q96MT3 831 aaPredicted RBP17.84■□□□□ 0.45
HMGN3-203ENST00000620514 SERPINB11Q96P15 392 aa17.84■□□□□ 0.45
HMGN3-203ENST00000620514 TUBGCP2Q9BSJ2 902 aa17.84■□□□□ 0.45
HMGN3-203ENST00000620514 MKRN2Q9H000 416 aaKnown RBP17.84■□□□□ 0.45
HMGN3-203ENST00000620514 NDST4Q9H3R1 872 aa17.84■□□□□ 0.45
HMGN3-203ENST00000620514 SAMSN1Q9NSI8 373 aaKnown RBP17.84■□□□□ 0.45
HMGN3-203ENST00000620514 STIM2Q9P246 746 aa17.84■□□□□ 0.45
HMGN3-203ENST00000620514 GON4LQ3T8J9 2241 aa17.84■□□□□ 0.45
HMGN3-203ENST00000620514 FOXN3O00409 490 aaPredicted RBP17.83■□□□□ 0.44
HMGN3-203ENST00000620514 CAPN9O14815 690 aa17.83■□□□□ 0.44
HMGN3-203ENST00000620514 MOCS2O96007 188 aaPredicted RBP17.83■□□□□ 0.44
HMGN3-203ENST00000620514 PABPC1P11940 636 aaKnown RBP17.83■□□□□ 0.44
HMGN3-203ENST00000620514 HLA-EP13747 358 aa17.83■□□□□ 0.44
HMGN3-203ENST00000620514 CD70P32970 193 aa17.83■□□□□ 0.44
HMGN3-203ENST00000620514 TRIM61Q5EBN2 209 aa17.83■□□□□ 0.44
HMGN3-203ENST00000620514 SPDYCQ5MJ68 293 aa17.83■□□□□ 0.44
HMGN3-203ENST00000620514 BEND5Q7L4P6 421 aa17.83■□□□□ 0.44
HMGN3-203ENST00000620514 KIAA0907Q7Z7F0 614 aaPredicted RBP17.83■□□□□ 0.44
HMGN3-203ENST00000620514 ADIPOR2Q86V24 386 aa17.83■□□□□ 0.44
HMGN3-203ENST00000620514 SYT12Q8IV01 421 aa17.83■□□□□ 0.44
HMGN3-203ENST00000620514 SLC41A1Q8IVJ1 513 aa17.83■□□□□ 0.44
HMGN3-203ENST00000620514 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.83■□□□□ 0.44
HMGN3-203ENST00000620514 WFIKKN2Q8TEU8 576 aa17.83■□□□□ 0.44
HMGN3-203ENST00000620514 AZIN2Q96A70 460 aa17.83■□□□□ 0.44
HMGN3-203ENST00000620514 CPXM1Q96SM3 734 aa17.83■□□□□ 0.44
HMGN3-203ENST00000620514 NUCKS1Q9H1E3 243 aaKnown RBP17.83■□□□□ 0.44
HMGN3-203ENST00000620514 DACH1Q9UI36 760 aa17.83■□□□□ 0.44
HMGN3-203ENST00000620514 XPO7Q9UIA9 1087 aaKnown RBP17.83■□□□□ 0.44
HMGN3-203ENST00000620514 GGA2Q9UJY4 613 aa17.83■□□□□ 0.44
HMGN3-203ENST00000620514 PILRBQ9UKJ0 227 aa17.83■□□□□ 0.44
HMGN3-203ENST00000620514 TLR6Q9Y2C9 796 aa17.83■□□□□ 0.44
HMGN3-203ENST00000620514 KCNJ18B7U540 433 aa17.82■□□□□ 0.44
HMGN3-203ENST00000620514 TIMM44O43615 452 aa17.82■□□□□ 0.44
HMGN3-203ENST00000620514 SYNCRIPO60506 623 aaKnown RBP17.82■□□□□ 0.44
HMGN3-203ENST00000620514 EPHX1P07099 455 aa17.82■□□□□ 0.44
HMGN3-203ENST00000620514 CLCN1P35523 988 aa17.82■□□□□ 0.44
HMGN3-203ENST00000620514 RPS24P62847 133 aaKnown RBP17.82■□□□□ 0.44
HMGN3-203ENST00000620514 YWHAZP63104 245 aaKnown RBP17.82■□□□□ 0.44
HMGN3-203ENST00000620514 ARID5AQ03989 594 aa17.82■□□□□ 0.44
HMGN3-203ENST00000620514 ZNF33AQ06730 810 aa17.82■□□□□ 0.44
HMGN3-203ENST00000620514 KCNMA1Q12791 1236 aa17.82■□□□□ 0.44
HMGN3-203ENST00000620514 NNTQ13423 1086 aa17.82■□□□□ 0.44
HMGN3-203ENST00000620514 KCNJ12Q14500 433 aa17.82■□□□□ 0.44
HMGN3-203ENST00000620514 ZC3H12AQ5D1E8 599 aaKnown RBP17.82■□□□□ 0.44
HMGN3-203ENST00000620514 SERPINA13PQ6UXR4 307 aa17.82■□□□□ 0.44
HMGN3-203ENST00000620514 SLC47A2Q86VL8 602 aa17.82■□□□□ 0.44
HMGN3-203ENST00000620514 CACUL1Q86Y37 369 aa17.82■□□□□ 0.44
HMGN3-203ENST00000620514 ZNF366Q8N895 744 aa17.82■□□□□ 0.44
HMGN3-203ENST00000620514 C1orf131Q8NDD1 294 aaKnown RBP17.82■□□□□ 0.44
HMGN3-203ENST00000620514 PRDM16Q9HAZ2 1276 aa17.82■□□□□ 0.44
HMGN3-203ENST00000620514 POPDC2Q9HBU9 364 aa17.82■□□□□ 0.44
HMGN3-203ENST00000620514 FSCN3Q9NQT6 498 aa17.82■□□□□ 0.44
HMGN3-203ENST00000620514 EVLQ9UI08 416 aaPredicted RBP17.82■□□□□ 0.44
HMGN3-203ENST00000620514 PCDHGC3Q9UN70 934 aa17.82■□□□□ 0.44
HMGN3-203ENST00000620514 CEP192Q8TEP8 1941 aa17.82■□□□□ 0.44
HMGN3-203ENST00000620514 CDX4O14627 284 aaPredicted RBP17.81■□□□□ 0.44
HMGN3-203ENST00000620514 IRAK2O43187 625 aa17.81■□□□□ 0.44
HMGN3-203ENST00000620514 TRUB2O95900 331 aaKnown RBP17.81■□□□□ 0.44
HMGN3-203ENST00000620514 IGLV3-25P01717 112 aa17.81■□□□□ 0.44
HMGN3-203ENST00000620514 ADRB1P08588 477 aa17.81■□□□□ 0.44
HMGN3-203ENST00000620514 COPAP53621 1224 aa17.81■□□□□ 0.44
HMGN3-203ENST00000620514 PTK2Q05397 1052 aa17.81■□□□□ 0.44
HMGN3-203ENST00000620514 PTPRNQ16849 979 aa17.81■□□□□ 0.44
HMGN3-203ENST00000620514 FNDC3BQ53EP0 1204 aaKnown RBP17.81■□□□□ 0.44
HMGN3-203ENST00000620514 MPP7Q5T2T1 576 aa17.81■□□□□ 0.44
HMGN3-203ENST00000620514 PEAR1Q5VY43 1037 aaPredicted RBP17.81■□□□□ 0.44
HMGN3-203ENST00000620514 MBLAC2Q68D91 279 aa17.81■□□□□ 0.44
HMGN3-203ENST00000620514 TMPRSS6Q8IU80 811 aa17.81■□□□□ 0.44
HMGN3-203ENST00000620514 AHI1Q8N157 1196 aa17.81■□□□□ 0.44
HMGN3-203ENST00000620514 CFAP52Q8N1V2 620 aa17.81■□□□□ 0.44
HMGN3-203ENST00000620514 HJURPQ8NCD3 748 aaPredicted RBP17.81■□□□□ 0.44
HMGN3-203ENST00000620514 DDX1Q92499 740 aaKnown RBP17.81■□□□□ 0.44
HMGN3-203ENST00000620514 PPP1R13BQ96KQ4 1090 aa17.81■□□□□ 0.44
HMGN3-203ENST00000620514 LMLNQ96KR4 655 aa17.81■□□□□ 0.44
HMGN3-203ENST00000620514 HSPA12BQ96MM6 686 aa17.81■□□□□ 0.44
HMGN3-203ENST00000620514 LSM14BQ9BX40 385 aaKnown RBP17.81■□□□□ 0.44
HMGN3-203ENST00000620514 PLCB1Q9NQ66 1216 aa17.81■□□□□ 0.44
HMGN3-203ENST00000620514 USP36Q9P275 1121 aaKnown RBP17.81■□□□□ 0.44
HMGN3-203ENST00000620514 MUC22E2RYF6 1773 aaPredicted RBP17.81■□□□□ 0.44
HMGN3-203ENST00000620514 CKAP5Q14008 2032 aa17.81■□□□□ 0.44
HMGN3-203ENST00000620514 CNOT1A5YKK6 2376 aaKnown RBP17.8■□□□□ 0.44
HMGN3-203ENST00000620514 PES1O00541 588 aaKnown RBP17.8■□□□□ 0.44
HMGN3-203ENST00000620514 GRAP2O75791 330 aa17.8■□□□□ 0.44
HMGN3-203ENST00000620514 LMAN2Q12907 356 aa17.8■□□□□ 0.44
HMGN3-203ENST00000620514 E2F5Q15329 346 aa17.8■□□□□ 0.44
HMGN3-203ENST00000620514 DCAF6Q58WW2 860 aa17.8■□□□□ 0.44
HMGN3-203ENST00000620514 MS4A13Q5J8X5 152 aa17.8■□□□□ 0.44
HMGN3-203ENST00000620514 RAP1GAP2Q684P5 730 aa17.8■□□□□ 0.44
HMGN3-203ENST00000620514 FAM183BPQ6ZVS7 135 aa17.8■□□□□ 0.44
HMGN3-203ENST00000620514 METTL3Q86U44 580 aaKnown RBP17.8■□□□□ 0.44
HMGN3-203ENST00000620514 MFN1Q8IWA4 741 aa17.8■□□□□ 0.44
HMGN3-203ENST00000620514 FAM71AQ8IYT1 594 aa17.8■□□□□ 0.44
HMGN3-203ENST00000620514 DEFB106AQ8N104 65 aa17.8■□□□□ 0.44
HMGN3-203ENST00000620514 GPT2Q8TD30 523 aa17.8■□□□□ 0.44
HMGN3-203ENST00000620514 SIPA1Q96FS4 1042 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms