RNA–Protein interactions for RNA: ENST00000620507.4

RBFOX1-223, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 5 BASIC

Gene RBFOX1, Length 4,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-223ENST00000620507 SOWAHAQ2M3V2 549 aa9.47□□□□□ -0.89
RBFOX1-223ENST00000620507 C16orf46Q6P387 395 aa9.47□□□□□ -0.89
RBFOX1-223ENST00000620507 KLC3Q6P597 504 aa9.47□□□□□ -0.89
RBFOX1-223ENST00000620507 ACAD11Q709F0 780 aa9.47□□□□□ -0.89
RBFOX1-223ENST00000620507 CLEC4CQ8WTT0 213 aa9.47□□□□□ -0.89
RBFOX1-223ENST00000620507 PTPRN2Q92932 1015 aa9.47□□□□□ -0.89
RBFOX1-223ENST00000620507 PIWIL1Q96J94 861 aaKnown RBP9.47□□□□□ -0.89
RBFOX1-223ENST00000620507 BTBD10Q9BSF8 475 aa9.47□□□□□ -0.89
RBFOX1-223ENST00000620507 DUSP16Q9BY84 665 aa9.47□□□□□ -0.89
RBFOX1-223ENST00000620507 CCDC68Q9H2F9 335 aa9.47□□□□□ -0.89
RBFOX1-223ENST00000620507 DCLRE1BQ9H816 532 aa9.47□□□□□ -0.89
RBFOX1-223ENST00000620507 VRTNQ9H8Y1 702 aa9.47□□□□□ -0.89
RBFOX1-223ENST00000620507 THAP1Q9NVV9 213 aa9.47□□□□□ -0.89
RBFOX1-223ENST00000620507 TREHO43280 583 aa9.47□□□□□ -0.89
RBFOX1-223ENST00000620507 MGRN1O60291 552 aa9.47□□□□□ -0.89
RBFOX1-223ENST00000620507 SLC18A1P54219 525 aa9.47□□□□□ -0.89
RBFOX1-223ENST00000620507 ART3Q13508 389 aa9.47□□□□□ -0.89
RBFOX1-223ENST00000620507 FAM110CQ1W6H9 321 aa9.47□□□□□ -0.89
RBFOX1-223ENST00000620507 PREPLQ4J6C6 727 aaPredicted RBP9.47□□□□□ -0.89
RBFOX1-223ENST00000620507 EGFL6Q8IUX8 553 aa9.47□□□□□ -0.89
RBFOX1-223ENST00000620507 BBS5Q8N3I7 341 aa9.47□□□□□ -0.89
RBFOX1-223ENST00000620507 BANPQ8N9N5 519 aa9.47□□□□□ -0.89
RBFOX1-223ENST00000620507 MCUQ8NE86 351 aa9.47□□□□□ -0.89
RBFOX1-223ENST00000620507 OR6P1Q8NGX9 317 aa9.47□□□□□ -0.89
RBFOX1-223ENST00000620507 P2RY11Q96G91 374 aa9.47□□□□□ -0.89
RBFOX1-223ENST00000620507 CELF6Q96J87 481 aaKnown RBP9.47□□□□□ -0.89
RBFOX1-223ENST00000620507 PPP1R36Q96LQ0 422 aa9.47□□□□□ -0.89
RBFOX1-223ENST00000620507 MECRQ9BV79 373 aa9.47□□□□□ -0.89
RBFOX1-223ENST00000620507 SLC4A5Q9BY07 1137 aa9.47□□□□□ -0.89
RBFOX1-223ENST00000620507 FARP1Q9Y4F1 1045 aaPredicted RBP9.47□□□□□ -0.89
RBFOX1-223ENST00000620507 IPPQ9Y573 584 aa9.47□□□□□ -0.89
RBFOX1-223ENST00000620507 PCDHA11Q9Y5I1 949 aa9.47□□□□□ -0.89
RBFOX1-223ENST00000620507 CDY2AQ9Y6F7 541 aa9.47□□□□□ -0.89
RBFOX1-223ENST00000620507 CDY1Q9Y6F8 540 aa9.47□□□□□ -0.89
RBFOX1-223ENST00000620507 POMCP01189 267 aa9.46□□□□□ -0.89
RBFOX1-223ENST00000620507 RALBP11234 206 aa9.46□□□□□ -0.89
RBFOX1-223ENST00000620507 GRK2P25098 689 aa9.46□□□□□ -0.89
RBFOX1-223ENST00000620507 CRYBB1P53674 252 aaPredicted RBP9.46□□□□□ -0.89
RBFOX1-223ENST00000620507 HDAC4P56524 1084 aa9.46□□□□□ -0.89
RBFOX1-223ENST00000620507 RIPK1Q13546 671 aa9.46□□□□□ -0.89
RBFOX1-223ENST00000620507 HSP90AA5PQ58FG0 334 aa9.46□□□□□ -0.89
RBFOX1-223ENST00000620507 OLFML1Q6UWY5 402 aa9.46□□□□□ -0.89
RBFOX1-223ENST00000620507 LINC00523Q86TU6 105 aa9.46□□□□□ -0.89
RBFOX1-223ENST00000620507 RNF135Q8IUD6 432 aa9.46□□□□□ -0.89
RBFOX1-223ENST00000620507 PYROXD2Q8N2H3 581 aa9.46□□□□□ -0.89
RBFOX1-223ENST00000620507 CCDC185Q8N715 623 aa9.46□□□□□ -0.89
RBFOX1-223ENST00000620507 PPHLN1Q8NEY8 458 aaKnown RBP9.46□□□□□ -0.89
RBFOX1-223ENST00000620507 ZFP42Q96MM3 310 aa9.46□□□□□ -0.89
RBFOX1-223ENST00000620507 CATSPERBQ9H7T0 1116 aa9.46□□□□□ -0.89
RBFOX1-223ENST00000620507 PRDM16Q9HAZ2 1276 aa9.46□□□□□ -0.89
RBFOX1-223ENST00000620507 FBXO6Q9NRD1 293 aaPredicted RBP9.46□□□□□ -0.89
RBFOX1-223ENST00000620507 DNAJC25-GNG10A0A024R161 153 aa9.46□□□□□ -0.9
RBFOX1-223ENST00000620507 GOLGA8QA0A0J9YX86 632 aa9.46□□□□□ -0.9
RBFOX1-223ENST00000620507 GOLGA8OA6NCC3 632 aa9.46□□□□□ -0.9
RBFOX1-223ENST00000620507 GOLGA8NF8WBI6 632 aa9.46□□□□□ -0.9
RBFOX1-223ENST00000620507 PMPCBO75439 489 aa9.46□□□□□ -0.9
RBFOX1-223ENST00000620507 CNMDO75829 334 aa9.46□□□□□ -0.9
RBFOX1-223ENST00000620507 ERVK-10P10266 1014 aa9.46□□□□□ -0.9
RBFOX1-223ENST00000620507 CPA3P15088 417 aa9.46□□□□□ -0.9
RBFOX1-223ENST00000620507 TPH1P17752 444 aa9.46□□□□□ -0.9
RBFOX1-223ENST00000620507 ERCC2P18074 760 aa9.46□□□□□ -0.9
RBFOX1-223ENST00000620507 CA8P35219 290 aa9.46□□□□□ -0.9
RBFOX1-223ENST00000620507 SERPINB8P50452 374 aa9.46□□□□□ -0.9
RBFOX1-223ENST00000620507 MAP2K5Q13163 448 aa9.46□□□□□ -0.9
RBFOX1-223ENST00000620507 MPP3Q13368 585 aa9.46□□□□□ -0.9
RBFOX1-223ENST00000620507 RCN1Q15293 331 aa9.46□□□□□ -0.9
RBFOX1-223ENST00000620507 RPS6KA2Q15349 733 aa9.46□□□□□ -0.9
RBFOX1-223ENST00000620507 MAPRE1Q15691 268 aaKnown RBP9.46□□□□□ -0.9
RBFOX1-223ENST00000620507 ARHGAP17Q68EM7 881 aa9.46□□□□□ -0.9
RBFOX1-223ENST00000620507 KYAT3Q6YP21 454 aaKnown RBP9.46□□□□□ -0.9
RBFOX1-223ENST00000620507 CLNKQ7Z7G1 428 aa9.46□□□□□ -0.9
RBFOX1-223ENST00000620507 RFWD2Q8NHY2 731 aa9.46□□□□□ -0.9
RBFOX1-223ENST00000620507 RNF217Q8TC41 542 aa9.46□□□□□ -0.9
RBFOX1-223ENST00000620507 SLC35F5Q8WV83 523 aa9.46□□□□□ -0.9
RBFOX1-223ENST00000620507 SMARCD1Q96GM5 515 aa9.46□□□□□ -0.9
RBFOX1-223ENST00000620507 SERAC1Q96JX3 654 aa9.46□□□□□ -0.9
RBFOX1-223ENST00000620507 KCTD15Q96SI1 283 aaPredicted RBP9.46□□□□□ -0.9
RBFOX1-223ENST00000620507 SERPINI1Q99574 410 aa9.46□□□□□ -0.9
RBFOX1-223ENST00000620507 SHCBP1LQ9BZQ2 653 aa9.46□□□□□ -0.9
RBFOX1-223ENST00000620507 R3HDMLQ9H3Y0 253 aa9.46□□□□□ -0.9
RBFOX1-223ENST00000620507 ZFYVE28Q9HCC9 887 aa9.46□□□□□ -0.9
RBFOX1-223ENST00000620507 NDE1Q9NXR1 346 aa9.46□□□□□ -0.9
RBFOX1-223ENST00000620507 MORF4L1Q9UBU8 362 aa9.46□□□□□ -0.9
RBFOX1-223ENST00000620507 SCOCQ9UIL1 159 aa9.46□□□□□ -0.9
RBFOX1-223ENST00000620507 CHKBQ9Y259 395 aa9.46□□□□□ -0.9
RBFOX1-223ENST00000620507 SSX2IPQ9Y2D8 614 aa9.46□□□□□ -0.9
RBFOX1-223ENST00000620507 C15orf41Q9Y2V0 281 aa9.46□□□□□ -0.9
RBFOX1-223ENST00000620507 LTBP1Q14766 1721 aa9.46□□□□□ -0.9
RBFOX1-223ENST00000620507 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.46□□□□□ -0.9
RBFOX1-223ENST00000620507 ZBTB42B2RXF5 422 aa9.46□□□□□ -0.9
RBFOX1-223ENST00000620507 NEMP1O14524 444 aa9.46□□□□□ -0.9
RBFOX1-223ENST00000620507 TIMM44O43615 452 aa9.46□□□□□ -0.9
RBFOX1-223ENST00000620507 YBX3P16989 372 aaKnown RBP eCLIP9.46□□□□□ -0.9
RBFOX1-223ENST00000620507 PEX19P40855 299 aa9.46□□□□□ -0.9
RBFOX1-223ENST00000620507 LILRA4P59901 499 aa9.46□□□□□ -0.9
RBFOX1-223ENST00000620507 CUL3Q13618 768 aa9.46□□□□□ -0.9
RBFOX1-223ENST00000620507 PCSK7Q16549 785 aa9.46□□□□□ -0.9
RBFOX1-223ENST00000620507 SPRED3Q2MJR0 410 aa9.46□□□□□ -0.9
RBFOX1-223ENST00000620507 ZNF792Q3KQV3 632 aa9.46□□□□□ -0.9
RBFOX1-223ENST00000620507 TAPT1Q6NXT6 567 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms