RNA–Protein interactions for RNA: ENST00000618262.4

SRRT-216, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRRT, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-216ENST00000618262 FTHL17Q9BXU8 183 aa12.45□□□□□ -0.42
SRRT-216ENST00000618262 TRIM8Q9BZR9 551 aa12.45□□□□□ -0.42
SRRT-216ENST00000618262 MRPS23Q9Y3D9 190 aaKnown RBP12.45□□□□□ -0.42
SRRT-216ENST00000618262 KMOO15229 486 aa12.45□□□□□ -0.42
SRRT-216ENST00000618262 ARHGEF15O94989 841 aa12.45□□□□□ -0.42
SRRT-216ENST00000618262 CFL1P23528 166 aaKnown RBP12.45□□□□□ -0.42
SRRT-216ENST00000618262 SNRPFP62306 86 aaKnown RBP12.45□□□□□ -0.42
SRRT-216ENST00000618262 HSPA14Q0VDF9 509 aa12.45□□□□□ -0.42
SRRT-216ENST00000618262 MTF1Q14872 753 aa12.45□□□□□ -0.42
SRRT-216ENST00000618262 CYTH1Q15438 398 aa12.45□□□□□ -0.42
SRRT-216ENST00000618262 NFIL3Q16649 462 aa12.45□□□□□ -0.42
SRRT-216ENST00000618262 INO80DQ53TQ3 878 aaPredicted RBP12.45□□□□□ -0.42
SRRT-216ENST00000618262 C2CD6Q53TS8 623 aa12.45□□□□□ -0.42
SRRT-216ENST00000618262 USP37Q86T82 979 aa12.45□□□□□ -0.42
SRRT-216ENST00000618262 SYTL1Q8IYJ3 562 aa12.45□□□□□ -0.42
SRRT-216ENST00000618262 BEST2Q8NFU1 509 aa12.45□□□□□ -0.42
SRRT-216ENST00000618262 NUF2Q9BZD4 464 aa12.45□□□□□ -0.42
SRRT-216ENST00000618262 SIX2Q9NPC8 291 aa12.45□□□□□ -0.42
SRRT-216ENST00000618262 TMEM161AQ9NX61 479 aa12.45□□□□□ -0.42
SRRT-216ENST00000618262 CNTN3Q9P232 1028 aa12.45□□□□□ -0.42
SRRT-216ENST00000618262 MRPL42Q9Y6G3 142 aaKnown RBP12.45□□□□□ -0.42
SRRT-216ENST00000618262 CTAGE15A4D2H0 777 aa12.45□□□□□ -0.42
SRRT-216ENST00000618262 PIK3R2O00459 728 aa12.45□□□□□ -0.42
SRRT-216ENST00000618262 CTAGE8P0CG41 777 aa12.45□□□□□ -0.42
SRRT-216ENST00000618262 GABREP78334 506 aa12.45□□□□□ -0.42
SRRT-216ENST00000618262 KLHDC7AQ5VTJ3 777 aa12.45□□□□□ -0.42
SRRT-216ENST00000618262 C9orf57Q5W0N0 161 aa12.45□□□□□ -0.42
SRRT-216ENST00000618262 POMZP3Q6PJE2 187 aa12.45□□□□□ -0.42
SRRT-216ENST00000618262 TMEM270Q6UE05 265 aa12.45□□□□□ -0.42
SRRT-216ENST00000618262 CTAGE6Q86UF2 777 aa12.45□□□□□ -0.42
SRRT-216ENST00000618262 CTAGE4Q8IX94 777 aa12.45□□□□□ -0.42
SRRT-216ENST00000618262 CADM3Q8N126 398 aa12.45□□□□□ -0.42
SRRT-216ENST00000618262 KREMEN1Q96MU8 473 aa12.45□□□□□ -0.42
SRRT-216ENST00000618262 PPP1R10Q96QC0 940 aaKnown RBP12.45□□□□□ -0.42
SRRT-216ENST00000618262 CHP1Q99653 195 aa12.45□□□□□ -0.42
SRRT-216ENST00000618262 CALN1Q9BXU9 219 aa12.45□□□□□ -0.42
SRRT-216ENST00000618262 IMPG2Q9BZV3 1241 aa12.45□□□□□ -0.42
SRRT-216ENST00000618262 C1orf112Q9NSG2 853 aa12.45□□□□□ -0.42
SRRT-216ENST00000618262 CHORDC1Q9UHD1 332 aaPredicted RBP12.45□□□□□ -0.42
SRRT-216ENST00000618262 PPP2R2CQ9Y2T4 447 aa12.45□□□□□ -0.42
SRRT-216ENST00000618262 MATN2O00339 956 aa12.44□□□□□ -0.42
SRRT-216ENST00000618262 PODXLO00592 558 aa12.44□□□□□ -0.42
SRRT-216ENST00000618262 NVLO15381 856 aaKnown RBP12.44□□□□□ -0.42
SRRT-216ENST00000618262 CYP26A1O43174 497 aa12.44□□□□□ -0.42
SRRT-216ENST00000618262 CBFA2T3O75081 653 aa12.44□□□□□ -0.42
SRRT-216ENST00000618262 IL18RAPO95256 599 aa12.44□□□□□ -0.42
SRRT-216ENST00000618262 ZNF3P17036 446 aa12.44□□□□□ -0.42
SRRT-216ENST00000618262 PPP2R2AP63151 447 aa12.44□□□□□ -0.42
SRRT-216ENST00000618262 TSPY1Q01534 308 aa12.44□□□□□ -0.42
SRRT-216ENST00000618262 DRAP1Q14919 205 aaPredicted RBP12.44□□□□□ -0.42
SRRT-216ENST00000618262 RAPH1Q70E73 1250 aa12.44□□□□□ -0.42
SRRT-216ENST00000618262 PASD1Q8IV76 773 aa12.44□□□□□ -0.42
SRRT-216ENST00000618262 SLC38A6Q8IZM9 456 aa12.44□□□□□ -0.42
SRRT-216ENST00000618262 C12orf29Q8N999 325 aa12.44□□□□□ -0.42
SRRT-216ENST00000618262 STARD8Q92502 1023 aa12.44□□□□□ -0.42
SRRT-216ENST00000618262 CASD1Q96PB1 797 aa12.44□□□□□ -0.42
SRRT-216ENST00000618262 ASB7Q9H672 318 aa12.44□□□□□ -0.42
SRRT-216ENST00000618262 FAIMQ9NVQ4 179 aa12.44□□□□□ -0.42
SRRT-216ENST00000618262 CITO14578 2027 aa12.44□□□□□ -0.42
SRRT-216ENST00000618262 SCN1AP35498 2009 aa12.44□□□□□ -0.42
SRRT-216ENST00000618262 TLL1O43897 1013 aa12.44□□□□□ -0.42
SRRT-216ENST00000618262 ASMTLO95671 621 aa12.44□□□□□ -0.42
SRRT-216ENST00000618262 GSTA1P08263 222 aa12.44□□□□□ -0.42
SRRT-216ENST00000618262 CTRB1P17538 263 aa12.44□□□□□ -0.42
SRRT-216ENST00000618262 LMO2P25791 158 aa12.44□□□□□ -0.42
SRRT-216ENST00000618262 RELQ04864 619 aaPredicted RBP12.44□□□□□ -0.42
SRRT-216ENST00000618262 NDUFA5Q16718 116 aa12.44□□□□□ -0.42
SRRT-216ENST00000618262 C6orf132Q5T0Z8 1188 aa12.44□□□□□ -0.42
SRRT-216ENST00000618262 CTRB2Q6GPI1 263 aa12.44□□□□□ -0.42
SRRT-216ENST00000618262 PPP1R2P3Q6NXS1 205 aa12.44□□□□□ -0.42
SRRT-216ENST00000618262 TAS1R1Q7RTX1 841 aa12.44□□□□□ -0.42
SRRT-216ENST00000618262 SPOCK2Q92563 424 aa12.44□□□□□ -0.42
SRRT-216ENST00000618262 NT5C1BQ96P26 610 aa12.44□□□□□ -0.42
SRRT-216ENST00000618262 SPATA16Q9BXB7 569 aa12.44□□□□□ -0.42
SRRT-216ENST00000618262 KLHL4Q9C0H6 718 aa12.44□□□□□ -0.42
SRRT-216ENST00000618262 SDCBP2Q9H190 292 aa12.44□□□□□ -0.42
SRRT-216ENST00000618262 STRIP2Q9ULQ0 834 aa12.44□□□□□ -0.42
SRRT-216ENST00000618262 MUC3AQ02505 3323 aa12.43□□□□□ -0.42
SRRT-216ENST00000618262 A8MX80 341 aa12.43□□□□□ -0.42
SRRT-216ENST00000618262 FAM47E-STBD1D6RA91 191 aa12.43□□□□□ -0.42
SRRT-216ENST00000618262 E7EVH7 732 aa12.43□□□□□ -0.42
SRRT-216ENST00000618262 AMHP03971 560 aa12.43□□□□□ -0.42
SRRT-216ENST00000618262 RPLP2P05387 115 aaKnown RBP12.43□□□□□ -0.42
SRRT-216ENST00000618262 OR4Q2P0C623 313 aa12.43□□□□□ -0.42
SRRT-216ENST00000618262 GNL1P36915 607 aaPredicted RBP12.43□□□□□ -0.42
SRRT-216ENST00000618262 LILRA4P59901 499 aa12.43□□□□□ -0.42
SRRT-216ENST00000618262 TAGLNQ01995 201 aaKnown RBP12.43□□□□□ -0.42
SRRT-216ENST00000618262 PPIGQ13427 754 aaKnown RBP eCLIP12.43□□□□□ -0.423e-7■■□□□ 13.7
SRRT-216ENST00000618262 PCBP1Q15365 356 aaKnown RBP eCLIP12.43□□□□□ -0.426e-8■■■■□ 20.1
SRRT-216ENST00000618262 TDRD12Q587J7 1177 aaKnown RBP12.43□□□□□ -0.42
SRRT-216ENST00000618262 OR6B3Q8NGW1 331 aa12.43□□□□□ -0.42
SRRT-216ENST00000618262 TOP1MTQ969P6 601 aa12.43□□□□□ -0.42
SRRT-216ENST00000618262 MRPL45Q9BRJ2 306 aaKnown RBP12.43□□□□□ -0.42
SRRT-216ENST00000618262 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.43□□□□□ -0.42
SRRT-216ENST00000618262 XYLT2Q9H1B5 865 aa12.43□□□□□ -0.42
SRRT-216ENST00000618262 NEK6Q9HC98 313 aa12.43□□□□□ -0.42
SRRT-216ENST00000618262 FAM49BQ9NUQ9 324 aa12.43□□□□□ -0.42
SRRT-216ENST00000618262 EMC3Q9P0I2 261 aa12.43□□□□□ -0.42
SRRT-216ENST00000618262 APEX2Q9UBZ4 518 aa12.43□□□□□ -0.42
SRRT-216ENST00000618262 UBQLN1Q9UMX0 589 aaKnown RBP12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms