RNA–Protein interactions for RNA: ENST00000617596.4

SNAP47-213, Transcript of synaptosome associated protein 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNAP47, Length 1,905 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47-213ENST00000617596 FAM161BQ96MY7 647 aa16.85■□□□□ 0.29
SNAP47-213ENST00000617596 SIK2Q9H0K1 926 aa16.85■□□□□ 0.29
SNAP47-213ENST00000617596 CXorf56Q9H5V9 222 aa16.85■□□□□ 0.29
SNAP47-213ENST00000617596 OLA1Q9NTK5 396 aaKnown RBP16.85■□□□□ 0.29
SNAP47-213ENST00000617596 RBM12Q9NTZ6 932 aaKnown RBP16.85■□□□□ 0.29
SNAP47-213ENST00000617596 DNMT3LQ9UJW3 386 aa16.85■□□□□ 0.29
SNAP47-213ENST00000617596 TLR6Q9Y2C9 796 aa16.85■□□□□ 0.29
SNAP47-213ENST00000617596 hCG_1818297A0A087WSY0 165 aa16.84■□□□□ 0.29
SNAP47-213ENST00000617596 KRIT1O00522 736 aa16.84■□□□□ 0.29
SNAP47-213ENST00000617596 SOX1O00570 391 aaPredicted RBP16.84■□□□□ 0.29
SNAP47-213ENST00000617596 SCAMP3O14828 347 aaKnown RBP16.84■□□□□ 0.29
SNAP47-213ENST00000617596 SYF2O95926 243 aaKnown RBP16.84■□□□□ 0.29
SNAP47-213ENST00000617596 OAS1P00973 400 aaKnown RBP16.84■□□□□ 0.29
SNAP47-213ENST00000617596 RHOP08100 348 aa16.84■□□□□ 0.29
SNAP47-213ENST00000617596 GOT1P17174 413 aa16.84■□□□□ 0.29
SNAP47-213ENST00000617596 GRIN2CQ14957 1233 aa16.84■□□□□ 0.29
SNAP47-213ENST00000617596 DPYSL2Q16555 572 aa16.84■□□□□ 0.29
SNAP47-213ENST00000617596 SLC5A9Q2M3M2 681 aa16.84■□□□□ 0.29
SNAP47-213ENST00000617596 LRIT3Q3SXY7 679 aa16.84■□□□□ 0.29
SNAP47-213ENST00000617596 EFHC2Q5JST6 749 aa16.84■□□□□ 0.29
SNAP47-213ENST00000617596 ARL14EPQ8N8R7 260 aaPredicted RBP16.84■□□□□ 0.29
SNAP47-213ENST00000617596 HAUS1Q96CS2 278 aa16.84■□□□□ 0.29
SNAP47-213ENST00000617596 SLC39A13Q96H72 371 aa16.84■□□□□ 0.29
SNAP47-213ENST00000617596 SAE1Q9UBE0 346 aaPredicted RBP16.84■□□□□ 0.29
SNAP47-213ENST00000617596 TTC7AQ9ULT0 858 aaPredicted RBP16.84■□□□□ 0.29
SNAP47-213ENST00000617596 IRF1P10914 325 aa16.84■□□□□ 0.29
SNAP47-213ENST00000617596 CKAP4Q07065 602 aaKnown RBP16.84■□□□□ 0.29
SNAP47-213ENST00000617596 HYAL1Q12794 435 aa16.84■□□□□ 0.29
SNAP47-213ENST00000617596 KCNC3Q14003 757 aa16.84■□□□□ 0.29
SNAP47-213ENST00000617596 PABPC1LQ4VXU2 614 aaKnown RBP16.84■□□□□ 0.29
SNAP47-213ENST00000617596 NOA1Q8NC60 698 aaKnown RBP16.84■□□□□ 0.29
SNAP47-213ENST00000617596 NTAN1Q96AB6 310 aa16.84■□□□□ 0.29
SNAP47-213ENST00000617596 PRKD2Q9BZL6 878 aa16.84■□□□□ 0.29
SNAP47-213ENST00000617596 SMG9Q9H0W8 520 aaKnown RBP16.84■□□□□ 0.29
SNAP47-213ENST00000617596 ARHGEF38Q9NXL2 777 aa16.84■□□□□ 0.29
SNAP47-213ENST00000617596 UNC80Q8N2C7 3258 aa16.84■□□□□ 0.29
SNAP47-213ENST00000617596 MTCL1Q9Y4B5 1905 aaKnown RBP16.83■□□□□ 0.29
SNAP47-213ENST00000617596 EBAG9O00559 213 aa16.83■□□□□ 0.28
SNAP47-213ENST00000617596 PAGE1O75459 146 aa16.83■□□□□ 0.28
SNAP47-213ENST00000617596 GLP2RO95838 553 aa16.83■□□□□ 0.28
SNAP47-213ENST00000617596 PTPN2P17706 415 aa16.83■□□□□ 0.28
SNAP47-213ENST00000617596 ZXDBP98169 803 aa16.83■□□□□ 0.28
SNAP47-213ENST00000617596 SIX1Q15475 284 aaPredicted RBP16.83■□□□□ 0.28
SNAP47-213ENST00000617596 TRIP4Q15650 581 aaPredicted RBP16.83■□□□□ 0.28
SNAP47-213ENST00000617596 ARL13BQ3SXY8 428 aa16.83■□□□□ 0.28
SNAP47-213ENST00000617596 PDZD4Q76G19 769 aaPredicted RBP16.83■□□□□ 0.28
SNAP47-213ENST00000617596 RFX6Q8HWS3 928 aa16.83■□□□□ 0.28
SNAP47-213ENST00000617596 CNPY4Q8N129 248 aa16.83■□□□□ 0.28
SNAP47-213ENST00000617596 SHKBP1Q8TBC3 707 aa16.83■□□□□ 0.28
SNAP47-213ENST00000617596 C1orf54Q8WWF1 131 aa16.83■□□□□ 0.28
SNAP47-213ENST00000617596 ATG4AQ8WYN0 398 aa16.83■□□□□ 0.28
SNAP47-213ENST00000617596 MRPS31Q92665 395 aaKnown RBP16.83■□□□□ 0.28
SNAP47-213ENST00000617596 WBP2Q969T9 261 aa16.83■□□□□ 0.28
SNAP47-213ENST00000617596 NSUN3Q9H649 340 aaKnown RBP16.83■□□□□ 0.28
SNAP47-213ENST00000617596 ZDHHC7Q9NXF8 308 aa16.83■□□□□ 0.28
SNAP47-213ENST00000617596 RNF14Q9UBS8 474 aa16.83■□□□□ 0.28
SNAP47-213ENST00000617596 R3HDM2Q9Y2K5 976 aaKnown RBP16.83■□□□□ 0.28
SNAP47-213ENST00000617596 KCNU1A8MYU2 1149 aa16.82■□□□□ 0.28
SNAP47-213ENST00000617596 XYLBO75191 536 aa16.82■□□□□ 0.28
SNAP47-213ENST00000617596 MOSPD3O75425 235 aa16.82■□□□□ 0.28
SNAP47-213ENST00000617596 C1RP00736 705 aa16.82■□□□□ 0.28
SNAP47-213ENST00000617596 HNRNPA1P09651 372 aaKnown RBP eCLIP16.82■□□□□ 0.28
SNAP47-213ENST00000617596 SRGAP2BP0DMP2 458 aa16.82■□□□□ 0.28
SNAP47-213ENST00000617596 MBL2P11226 248 aaPredicted RBP16.82■□□□□ 0.28
SNAP47-213ENST00000617596 HDCP19113 662 aa16.82■□□□□ 0.28
SNAP47-213ENST00000617596 HOXA9P31269 272 aa16.82■□□□□ 0.28
SNAP47-213ENST00000617596 PPP3CCP48454 512 aa16.82■□□□□ 0.28
SNAP47-213ENST00000617596 SCAPQ12770 1279 aa16.82■□□□□ 0.28
SNAP47-213ENST00000617596 KLF1Q13351 362 aaPredicted RBP16.82■□□□□ 0.28
SNAP47-213ENST00000617596 ANKRD20A8PQ5CZ79 823 aa16.82■□□□□ 0.28
SNAP47-213ENST00000617596 KLHL7Q8IXQ5 586 aa16.82■□□□□ 0.28
SNAP47-213ENST00000617596 PCDH19Q8TAB3 1148 aa16.82■□□□□ 0.28
SNAP47-213ENST00000617596 PIDD1Q9HB75 910 aa16.82■□□□□ 0.28
SNAP47-213ENST00000617596 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.82■□□□□ 0.28
SNAP47-213ENST00000617596 HPCAL4Q9UM19 191 aa16.82■□□□□ 0.28
SNAP47-213ENST00000617596 MFHAS1Q9Y4C4 1052 aa16.82■□□□□ 0.28
SNAP47-213ENST00000617596 PRRC2BQ5JSZ5 2229 aaKnown RBP16.82■□□□□ 0.28
SNAP47-213ENST00000617596 CST8O60676 142 aa16.82■□□□□ 0.28
SNAP47-213ENST00000617596 MAP3K6O95382 1288 aa16.82■□□□□ 0.28
SNAP47-213ENST00000617596 TUBP50607 506 aa16.82■□□□□ 0.28
SNAP47-213ENST00000617596 PPP2R5DQ14738 602 aa16.82■□□□□ 0.28
SNAP47-213ENST00000617596 PDK2Q15119 407 aa16.82■□□□□ 0.28
SNAP47-213ENST00000617596 TEAD2Q15562 447 aa16.82■□□□□ 0.28
SNAP47-213ENST00000617596 TAZQ16635 292 aa16.82■□□□□ 0.28
SNAP47-213ENST00000617596 MAP7D3Q8IWC1 876 aa16.82■□□□□ 0.28
SNAP47-213ENST00000617596 MICALL1Q8N3F8 863 aa16.82■□□□□ 0.28
SNAP47-213ENST00000617596 PRELID2Q8N945 189 aa16.82■□□□□ 0.28
SNAP47-213ENST00000617596 NETO2Q8NC67 525 aa16.82■□□□□ 0.28
SNAP47-213ENST00000617596 HDAC7Q8WUI4 952 aa16.82■□□□□ 0.28
SNAP47-213ENST00000617596 ING5Q8WYH8 240 aa16.82■□□□□ 0.28
SNAP47-213ENST00000617596 SMG7Q92540 1137 aaKnown RBP16.82■□□□□ 0.28
SNAP47-213ENST00000617596 LRCH3Q96II8 777 aa16.82■□□□□ 0.28
SNAP47-213ENST00000617596 CSPG4P5Q96PW8 444 aa16.82■□□□□ 0.28
SNAP47-213ENST00000617596 CDK5RAP1Q96SZ6 601 aaKnown RBP16.82■□□□□ 0.28
SNAP47-213ENST00000617596 SLC46A2Q9BY10 475 aa16.82■□□□□ 0.28
SNAP47-213ENST00000617596 DDX47Q9H0S4 455 aaKnown RBP16.82■□□□□ 0.28
SNAP47-213ENST00000617596 ETNK2Q9NVF9 386 aa16.82■□□□□ 0.28
SNAP47-213ENST00000617596 OR12D3Q9UGF7 316 aa16.82■□□□□ 0.28
SNAP47-213ENST00000617596 DPP7Q9UHL4 492 aa16.82■□□□□ 0.28
SNAP47-213ENST00000617596 HS3ST4Q9Y661 456 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms