RNA–Protein interactions for RNA: ENST00000617271.4

PCDH15-231, Transcript of protocadherin related 15, human

APPRIS P3 TSL 5 BASIC

Gene PCDH15, Length 6,425 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCDH15-231	ENST00000617271	CORO2B	Q9UQ03	480 aa		7.54	□□□□□ -1.2
PCDH15-231	ENST00000617271	SNX8	Q9Y5X2	465 aa		7.54	□□□□□ -1.2
PCDH15-231	ENST00000617271	NR5A2	O00482	541 aa		7.53	□□□□□ -1.2
PCDH15-231	ENST00000617271	ACSL4	O60488	711 aa		7.53	□□□□□ -1.2
PCDH15-231	ENST00000617271	ECD	O95905	644 aa	Predicted RBP	7.53	□□□□□ -1.2
PCDH15-231	ENST00000617271	TCN1	P20061	433 aa	Predicted RBP	7.53	□□□□□ -1.2
PCDH15-231	ENST00000617271	PSEN1	P49768	467 aa		7.53	□□□□□ -1.2
PCDH15-231	ENST00000617271	FMR1	Q06787	632 aa	Known RBP eCLIP	7.53	□□□□□ -1.2
PCDH15-231	ENST00000617271	KLC1	Q07866	573 aa		7.53	□□□□□ -1.2
PCDH15-231	ENST00000617271	MPP3	Q13368	585 aa		7.53	□□□□□ -1.2
PCDH15-231	ENST00000617271	ACAP1	Q15027	740 aa		7.53	□□□□□ -1.2
PCDH15-231	ENST00000617271	SLC26A11	Q86WA9	606 aa		7.53	□□□□□ -1.2
PCDH15-231	ENST00000617271	LGI2	Q8N0V4	545 aa		7.53	□□□□□ -1.2
PCDH15-231	ENST00000617271	COLGALT1	Q8NBJ5	622 aa		7.53	□□□□□ -1.2
PCDH15-231	ENST00000617271	ZNF248	Q8NDW4	579 aa		7.53	□□□□□ -1.2
PCDH15-231	ENST00000617271	ATL1	Q8WXF7	558 aa		7.53	□□□□□ -1.2
PCDH15-231	ENST00000617271	DNAJC9	Q8WXX5	260 aa		7.53	□□□□□ -1.2
PCDH15-231	ENST00000617271	SH3GL2	Q99962	352 aa		7.53	□□□□□ -1.2
PCDH15-231	ENST00000617271	SH2D3A	Q9BRG2	576 aa		7.53	□□□□□ -1.2
PCDH15-231	ENST00000617271	GINS4	Q9BRT9	223 aa		7.53	□□□□□ -1.2
PCDH15-231	ENST00000617271	FAIM2	Q9BWQ8	316 aa		7.53	□□□□□ -1.2
PCDH15-231	ENST00000617271	THAP2	Q9H0W7	228 aa		7.53	□□□□□ -1.2
PCDH15-231	ENST00000617271	TAGLN3	Q9UI15	199 aa		7.53	□□□□□ -1.2
PCDH15-231	ENST00000617271	RABGEF1	Q9UJ41	708 aa		7.53	□□□□□ -1.2
PCDH15-231	ENST00000617271	DUSP12	Q9UNI6	340 aa		7.53	□□□□□ -1.2
PCDH15-231	ENST00000617271	TRIM17	Q9Y577	477 aa		7.53	□□□□□ -1.2
PCDH15-231	ENST00000617271	SMIM31	A0A1B0GVY4	71 aa		7.53	□□□□□ -1.2
PCDH15-231	ENST00000617271	CENPX	A8MT69	81 aa		7.53	□□□□□ -1.2
PCDH15-231	ENST00000617271	ZNF185	O15231	689 aa		7.53	□□□□□ -1.2
PCDH15-231	ENST00000617271	SKAP2	O75563	359 aa	Predicted RBP	7.53	□□□□□ -1.2
PCDH15-231	ENST00000617271	GCAT	O75600	419 aa		7.53	□□□□□ -1.2
PCDH15-231	ENST00000617271	ZNF682	O95780	498 aa		7.53	□□□□□ -1.2
PCDH15-231	ENST00000617271	CYP1A1	P04798	512 aa	Predicted RBP	7.53	□□□□□ -1.2
PCDH15-231	ENST00000617271	VIL1	P09327	827 aa	Known RBP	7.53	□□□□□ -1.2
PCDH15-231	ENST00000617271	SLC2A4	P14672	509 aa		7.53	□□□□□ -1.2
PCDH15-231	ENST00000617271	TYMP	P19971	482 aa		7.53	□□□□□ -1.2
PCDH15-231	ENST00000617271	NOS3	P29474	1203 aa		7.53	□□□□□ -1.2
PCDH15-231	ENST00000617271	ALDH9A1	P49189	494 aa		7.53	□□□□□ -1.2
PCDH15-231	ENST00000617271	ITGA1	P56199	1179 aa		7.53	□□□□□ -1.2
PCDH15-231	ENST00000617271	OTUD4	Q01804	1114 aa	Known RBP	7.53	□□□□□ -1.2
PCDH15-231	ENST00000617271	FAM98B	Q52LJ0	330 aa	Known RBP	7.53	□□□□□ -1.2
PCDH15-231	ENST00000617271	FAM46C	Q5VWP2	391 aa		7.53	□□□□□ -1.2
PCDH15-231	ENST00000617271	TRAF7	Q6Q0C0	670 aa		7.53	□□□□□ -1.2
PCDH15-231	ENST00000617271	ILDR2	Q71H61	639 aa		7.53	□□□□□ -1.2
PCDH15-231	ENST00000617271	CLEC10A	Q8IUN9	316 aa		7.53	□□□□□ -1.2
PCDH15-231	ENST00000617271	REPS2	Q8NFH8	660 aa		7.53	□□□□□ -1.2
PCDH15-231	ENST00000617271	RNASE11	Q8TAA1	199 aa	Known RBP	7.53	□□□□□ -1.2
PCDH15-231	ENST00000617271	ACTRT2	Q8TDY3	377 aa		7.53	□□□□□ -1.2
PCDH15-231	ENST00000617271	LRRC4B	Q9NT99	713 aa		7.53	□□□□□ -1.2
PCDH15-231	ENST00000617271	PDP2	Q9P2J9	529 aa		7.53	□□□□□ -1.2
PCDH15-231	ENST00000617271	ZNF112	Q9UJU3	913 aa		7.53	□□□□□ -1.2
PCDH15-231	ENST00000617271	NRXN1	Q9ULB1	1477 aa		7.53	□□□□□ -1.2
PCDH15-231	ENST00000617271		E7ENQ6	273 aa		7.53	□□□□□ -1.2
PCDH15-231	ENST00000617271	CD3EAP	O15446	510 aa	Known RBP	7.53	□□□□□ -1.2
PCDH15-231	ENST00000617271	IL1R1	P14778	569 aa		7.53	□□□□□ -1.2
PCDH15-231	ENST00000617271	OR1E1	P30953	314 aa		7.53	□□□□□ -1.2
PCDH15-231	ENST00000617271	GPR15	P49685	360 aa		7.53	□□□□□ -1.2
PCDH15-231	ENST00000617271	HNRNPH2	P55795	449 aa	Known RBP	7.53	□□□□□ -1.2
PCDH15-231	ENST00000617271	DDR2	Q16832	855 aa		7.53	□□□□□ -1.2
PCDH15-231	ENST00000617271	SLC44A2	Q8IWA5	706 aa	Predicted RBP	7.53	□□□□□ -1.2
PCDH15-231	ENST00000617271	ANKS1A	Q92625	1134 aa		7.53	□□□□□ -1.2
PCDH15-231	ENST00000617271	MTERF3	Q96E29	417 aa		7.53	□□□□□ -1.2
PCDH15-231	ENST00000617271	ACOX2	Q99424	681 aa		7.53	□□□□□ -1.2
PCDH15-231	ENST00000617271	OSMR	Q99650	979 aa		7.53	□□□□□ -1.2
PCDH15-231	ENST00000617271	SOHLH2	Q9NX45	425 aa		7.53	□□□□□ -1.2
PCDH15-231	ENST00000617271	TAS2R13	Q9NYV9	303 aa		7.53	□□□□□ -1.2
PCDH15-231	ENST00000617271	NDUFA13	Q9P0J0	144 aa		7.53	□□□□□ -1.2
PCDH15-231	ENST00000617271	ZBTB14	O43829	449 aa		7.53	□□□□□ -1.2
PCDH15-231	ENST00000617271	FKTN	O75072	461 aa		7.53	□□□□□ -1.2
PCDH15-231	ENST00000617271	HIST1H2AB	P04908	130 aa		7.53	□□□□□ -1.2
PCDH15-231	ENST00000617271	PKN1	Q16512	942 aa		7.53	□□□□□ -1.2
PCDH15-231	ENST00000617271	FBXL19	Q6PCT2	694 aa		7.53	□□□□□ -1.2
PCDH15-231	ENST00000617271	HIST3H2A	Q7L7L0	130 aa		7.53	□□□□□ -1.2
PCDH15-231	ENST00000617271	RD3	Q7Z3Z2	195 aa		7.53	□□□□□ -1.2
PCDH15-231	ENST00000617271	EPHX4	Q8IUS5	362 aa		7.53	□□□□□ -1.2
PCDH15-231	ENST00000617271	FBXO39	Q8N4B4	442 aa		7.53	□□□□□ -1.2
PCDH15-231	ENST00000617271	HIST1H2AC	Q93077	130 aa		7.53	□□□□□ -1.2
PCDH15-231	ENST00000617271	PRMT6	Q96LA8	375 aa	Predicted RBP	7.53	□□□□□ -1.2
PCDH15-231	ENST00000617271	TNPO3	Q9Y5L0	923 aa	Known RBP	7.53	□□□□□ -1.2
PCDH15-231	ENST00000617271	FAM25A	B3EWG3	89 aa		7.53	□□□□□ -1.2
PCDH15-231	ENST00000617271	FAM25C	B3EWG5	89 aa		7.53	□□□□□ -1.2
PCDH15-231	ENST00000617271	FAM25G	B3EWG6	89 aa		7.53	□□□□□ -1.2
PCDH15-231	ENST00000617271	NFIB	O00712	420 aa		7.53	□□□□□ -1.2
PCDH15-231	ENST00000617271	SGTA	O43765	313 aa		7.53	□□□□□ -1.2
PCDH15-231	ENST00000617271	NUDT14	O95848	222 aa		7.53	□□□□□ -1.2
PCDH15-231	ENST00000617271	PPM1A	P35813	382 aa		7.53	□□□□□ -1.2
PCDH15-231	ENST00000617271	FEN1	P39748	380 aa	Known RBP	7.53	□□□□□ -1.2
PCDH15-231	ENST00000617271	SNRPD1	P62314	119 aa	Known RBP	7.53	□□□□□ -1.2
PCDH15-231	ENST00000617271	MAPK7	Q13164	816 aa		7.53	□□□□□ -1.2
PCDH15-231	ENST00000617271	ACVR2B	Q13705	512 aa		7.53	□□□□□ -1.2
PCDH15-231	ENST00000617271	CBWD6	Q4V339	395 aa		7.53	□□□□□ -1.2
PCDH15-231	ENST00000617271	COLGALT2	Q8IYK4	626 aa		7.53	□□□□□ -1.2
PCDH15-231	ENST00000617271	SETD9	Q8NE22	299 aa		7.53	□□□□□ -1.2
PCDH15-231	ENST00000617271	C19orf18	Q8NEA5	215 aa		7.53	□□□□□ -1.2
PCDH15-231	ENST00000617271	WDR36	Q8NI36	951 aa	Known RBP	7.53	□□□□□ -1.2
PCDH15-231	ENST00000617271	DNAJB3	Q8WWF6	145 aa		7.53	□□□□□ -1.2
PCDH15-231	ENST00000617271	SGF29	Q96ES7	293 aa		7.53	□□□□□ -1.2
PCDH15-231	ENST00000617271	POLR1B	Q9H9Y6	1135 aa		7.53	□□□□□ -1.2
PCDH15-231	ENST00000617271	ASAH2	Q9NR71	780 aa		7.53	□□□□□ -1.2
PCDH15-231	ENST00000617271	CISH	Q9NSE2	258 aa		7.53	□□□□□ -1.2

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