RNA–Protein interactions for RNA: ENST00000616395.4

TRAPPC3-209, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-209ENST00000616395 AGPAT3Q9NRZ7 376 aa18.47■□□□□ 0.55
TRAPPC3-209ENST00000616395 INTS13Q9NVM9 706 aa18.47■□□□□ 0.55
TRAPPC3-209ENST00000616395 DNMT3LQ9UJW3 386 aa18.47■□□□□ 0.55
TRAPPC3-209ENST00000616395 ZKSCAN5Q9Y2L8 839 aa18.47■□□□□ 0.55
TRAPPC3-209ENST00000616395 TRIM49BA6NDI0 452 aa18.46■□□□□ 0.55
TRAPPC3-209ENST00000616395 ESPNB1AK53 854 aa18.46■□□□□ 0.55
TRAPPC3-209ENST00000616395 LDHAP00338 332 aaKnown RBP18.46■□□□□ 0.55
TRAPPC3-209ENST00000616395 HNF1BP35680 557 aa18.46■□□□□ 0.55
TRAPPC3-209ENST00000616395 IL12RB1P42701 662 aa18.46■□□□□ 0.55
TRAPPC3-209ENST00000616395 TARDBPQ13148 414 aaKnown RBP eCLIP18.46■□□□□ 0.55
TRAPPC3-209ENST00000616395 KRT31Q15323 416 aa18.46■□□□□ 0.55
TRAPPC3-209ENST00000616395 TEAD4Q15561 434 aa18.46■□□□□ 0.55
TRAPPC3-209ENST00000616395 GPD1LQ8N335 351 aa18.46■□□□□ 0.55
TRAPPC3-209ENST00000616395 CCDC112Q8NEF3 446 aa18.46■□□□□ 0.55
TRAPPC3-209ENST00000616395 OR6B3Q8NGW1 331 aa18.46■□□□□ 0.55
TRAPPC3-209ENST00000616395 SNIP1Q8TAD8 396 aaKnown RBP18.46■□□□□ 0.55
TRAPPC3-209ENST00000616395 IGSF8Q969P0 613 aa18.46■□□□□ 0.55
TRAPPC3-209ENST00000616395 ANKRD36BP1Q96IX9 119 aa18.46■□□□□ 0.55
TRAPPC3-209ENST00000616395 KCNK16Q96T55 309 aa18.46■□□□□ 0.55
TRAPPC3-209ENST00000616395 TRAF3IP3Q9Y228 551 aa18.46■□□□□ 0.55
TRAPPC3-209ENST00000616395 MGAQ8IWI9 3026 aa18.45■□□□□ 0.54
TRAPPC3-209ENST00000616395 PTPRQQ9UMZ3 2332 aa18.45■□□□□ 0.54
TRAPPC3-209ENST00000616395 ZDHHC11BP0C7U3 371 aa18.45■□□□□ 0.54
TRAPPC3-209ENST00000616395 PGFP49763 221 aa18.45■□□□□ 0.54
TRAPPC3-209ENST00000616395 CXADRP78310 365 aa18.45■□□□□ 0.54
TRAPPC3-209ENST00000616395 TLE3Q04726 772 aa18.45■□□□□ 0.54
TRAPPC3-209ENST00000616395 NR1I3Q14994 352 aa18.45■□□□□ 0.54
TRAPPC3-209ENST00000616395 RTP5Q14D33 572 aa18.45■□□□□ 0.54
TRAPPC3-209ENST00000616395 KCNT1Q5JUK3 1230 aa18.45■□□□□ 0.54
TRAPPC3-209ENST00000616395 RDH13Q8NBN7 331 aa18.45■□□□□ 0.54
TRAPPC3-209ENST00000616395 MED15Q96RN5 788 aa18.45■□□□□ 0.54
TRAPPC3-209ENST00000616395 TUBGCP2Q9BSJ2 902 aa18.45■□□□□ 0.54
TRAPPC3-209ENST00000616395 C6orf106Q9H6K1 298 aaPredicted RBP18.45■□□□□ 0.54
TRAPPC3-209ENST00000616395 METTL14Q9HCE5 456 aaKnown RBP18.45■□□□□ 0.54
TRAPPC3-209ENST00000616395 TM9SF3Q9HD45 589 aa18.45■□□□□ 0.54
TRAPPC3-209ENST00000616395 RTN4Q9NQC3 1192 aaKnown RBP18.45■□□□□ 0.54
TRAPPC3-209ENST00000616395 PLK2Q9NYY3 685 aa18.45■□□□□ 0.54
TRAPPC3-209ENST00000616395 PCDHGA1Q9Y5H4 931 aa18.45■□□□□ 0.54
TRAPPC3-209ENST00000616395 SYNCRIPO60506 623 aaKnown RBP18.44■□□□□ 0.54
TRAPPC3-209ENST00000616395 ACADMP11310 421 aa18.44■□□□□ 0.54
TRAPPC3-209ENST00000616395 ZNF132P52740 706 aa18.44■□□□□ 0.54
TRAPPC3-209ENST00000616395 COPAP53621 1224 aa18.44■□□□□ 0.54
TRAPPC3-209ENST00000616395 UBXN1Q04323 297 aa18.44■□□□□ 0.54
TRAPPC3-209ENST00000616395 ADAM9Q13443 819 aa18.44■□□□□ 0.54
TRAPPC3-209ENST00000616395 ENPP2Q13822 863 aa18.44■□□□□ 0.54
TRAPPC3-209ENST00000616395 TSR1Q2NL82 804 aaKnown RBP18.44■□□□□ 0.54
TRAPPC3-209ENST00000616395 INAVAQ3KP66 663 aa18.44■□□□□ 0.54
TRAPPC3-209ENST00000616395 TAF1BQ53T94 588 aaPredicted RBP18.44■□□□□ 0.54
TRAPPC3-209ENST00000616395 P2RY11Q96G91 374 aa18.44■□□□□ 0.54
TRAPPC3-209ENST00000616395 KLF16Q9BXK1 252 aaPredicted RBP18.44■□□□□ 0.54
TRAPPC3-209ENST00000616395 NRSN2Q9GZP1 204 aa18.44■□□□□ 0.54
TRAPPC3-209ENST00000616395 PCED1AQ9H1Q7 454 aa18.44■□□□□ 0.54
TRAPPC3-209ENST00000616395 VPS16Q9H269 839 aa18.44■□□□□ 0.54
TRAPPC3-209ENST00000616395 THAP10Q9P2Z0 257 aaPredicted RBP18.44■□□□□ 0.54
TRAPPC3-209ENST00000616395 ZBTB32Q9Y2Y4 487 aaPredicted RBP18.44■□□□□ 0.54
TRAPPC3-209ENST00000616395 ITIH6Q6UXX5 1313 aa18.44■□□□□ 0.54
TRAPPC3-209ENST00000616395 TMEM131Q92545 1883 aa18.43■□□□□ 0.54
TRAPPC3-209ENST00000616395 A0A1W2PQC6 194 aa18.43■□□□□ 0.54
TRAPPC3-209ENST00000616395 LGALS16A8MUM7 142 aa18.43■□□□□ 0.54
TRAPPC3-209ENST00000616395 ERVH48-1M5A8F1 160 aa18.43■□□□□ 0.54
TRAPPC3-209ENST00000616395 CBX4O00257 560 aa18.43■□□□□ 0.54
TRAPPC3-209ENST00000616395 TLR5O60602 858 aa18.43■□□□□ 0.54
TRAPPC3-209ENST00000616395 TBX18O95935 607 aa18.43■□□□□ 0.54
TRAPPC3-209ENST00000616395 TNNC2P02585 160 aa18.43■□□□□ 0.54
TRAPPC3-209ENST00000616395 ACO1P21399 889 aaKnown RBP18.43■□□□□ 0.54
TRAPPC3-209ENST00000616395 GRIA4P48058 902 aa18.43■□□□□ 0.54
TRAPPC3-209ENST00000616395 SLC5A3P53794 718 aa18.43■□□□□ 0.54
TRAPPC3-209ENST00000616395 MAN2A1Q16706 1144 aa18.43■□□□□ 0.54
TRAPPC3-209ENST00000616395 LURAP1LQ8IV03 231 aa18.43■□□□□ 0.54
TRAPPC3-209ENST00000616395 B3GALNT2Q8NCR0 500 aa18.43■□□□□ 0.54
TRAPPC3-209ENST00000616395 FGF11Q92914 225 aa18.43■□□□□ 0.54
TRAPPC3-209ENST00000616395 NAP1L5Q96NT1 182 aaPredicted RBP18.43■□□□□ 0.54
TRAPPC3-209ENST00000616395 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.43■□□□□ 0.542e-12■■■■■ 298.1
TRAPPC3-209ENST00000616395 TAB2Q9NYJ8 693 aa18.43■□□□□ 0.54
TRAPPC3-209ENST00000616395 IL37Q9NZH6 218 aa18.43■□□□□ 0.54
TRAPPC3-209ENST00000616395 FBXO10Q9UK96 956 aa18.43■□□□□ 0.54
TRAPPC3-209ENST00000616395 ENC1O14682 589 aa18.42■□□□□ 0.54
TRAPPC3-209ENST00000616395 SLC16A3O15427 465 aaKnown RBP18.42■□□□□ 0.54
TRAPPC3-209ENST00000616395 TACC1O75410 805 aa18.42■□□□□ 0.54
TRAPPC3-209ENST00000616395 RFPL3O75679 317 aa18.42■□□□□ 0.54
TRAPPC3-209ENST00000616395 EPB41P11171 864 aaKnown RBP18.42■□□□□ 0.54
TRAPPC3-209ENST00000616395 ACSL1P33121 698 aa18.42■□□□□ 0.54
TRAPPC3-209ENST00000616395 PMS1P54277 932 aaKnown RBP18.42■□□□□ 0.54
TRAPPC3-209ENST00000616395 KCNC4Q03721 635 aa18.42■□□□□ 0.54
TRAPPC3-209ENST00000616395 DNAJC3Q13217 504 aa18.42■□□□□ 0.54
TRAPPC3-209ENST00000616395 SNRNP35Q16560 246 aaKnown RBP18.42■□□□□ 0.54
TRAPPC3-209ENST00000616395 NFIL3Q16649 462 aa18.42■□□□□ 0.54
TRAPPC3-209ENST00000616395 GEN1Q17RS7 908 aa18.42■□□□□ 0.54
TRAPPC3-209ENST00000616395 DUOXA2Q1HG44 320 aa18.42■□□□□ 0.54
TRAPPC3-209ENST00000616395 HES3Q5TGS1 186 aa18.42■□□□□ 0.54
TRAPPC3-209ENST00000616395 GATAD2AQ86YP4 633 aa18.42■□□□□ 0.54
TRAPPC3-209ENST00000616395 CNGA4Q8IV77 575 aa18.42■□□□□ 0.54
TRAPPC3-209ENST00000616395 FMNL3Q8IVF7 1028 aa18.42■□□□□ 0.54
TRAPPC3-209ENST00000616395 SPACA3Q8IXA5 215 aa18.42■□□□□ 0.54
TRAPPC3-209ENST00000616395 FAM181AQ8N9Y4 354 aa18.42■□□□□ 0.54
TRAPPC3-209ENST00000616395 PCMTD1Q96MG8 357 aaPredicted RBP18.42■□□□□ 0.54
TRAPPC3-209ENST00000616395 OSGEPQ9NPF4 335 aa18.42■□□□□ 0.54
TRAPPC3-209ENST00000616395 LSM7Q9UK45 103 aaKnown RBP18.42■□□□□ 0.54
TRAPPC3-209ENST00000616395 FRMD4BQ9Y2L6 1034 aa18.42■□□□□ 0.54
TRAPPC3-209ENST00000616395 SLC27A6Q9Y2P4 619 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms