RNA–Protein interactions for RNA: ENST00000616315.1

NEAT1-205, nuclear paraspeckle assembly transcript 1, humanhuman

TSL 2 BASIC

Gene NEAT1, Length 483 nt, Biotype lincRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEAT1-205ENST00000616315 NGDNQ8NEJ9 315 aaKnown RBP4.83□□□□□ -1.64
NEAT1-205ENST00000616315 SLC2A12Q8TD20 617 aa4.83□□□□□ -1.64
NEAT1-205ENST00000616315 NPIPB3Q92617 1050 aa4.83□□□□□ -1.64
NEAT1-205ENST00000616315 HDAC2Q92769 488 aaKnown RBP4.83□□□□□ -1.64
NEAT1-205ENST00000616315 HVCN1Q96D96 273 aa4.83□□□□□ -1.64
NEAT1-205ENST00000616315 FBXL20Q96IG2 436 aa4.83□□□□□ -1.64
NEAT1-205ENST00000616315 PRR25Q96S07 402 aa4.83□□□□□ -1.64
NEAT1-205ENST00000616315 RNF7Q9UBF6 113 aa4.83□□□□□ -1.64
NEAT1-205ENST00000616315 WDR27A2RRH5 827 aa4.82□□□□□ -1.64
NEAT1-205ENST00000616315 VWA3AA6NCI4 1184 aa4.82□□□□□ -1.64
NEAT1-205ENST00000616315 SAC3D1A6NKF1 404 aa4.82□□□□□ -1.64
NEAT1-205ENST00000616315 VWC2LB2RUY7 222 aa4.82□□□□□ -1.64
NEAT1-205ENST00000616315 M0QYT0 321 aa4.82□□□□□ -1.64
NEAT1-205ENST00000616315 NKX2-8O15522 239 aa4.82□□□□□ -1.64
NEAT1-205ENST00000616315 PEX1O43933 1283 aa4.82□□□□□ -1.64
NEAT1-205ENST00000616315 TMPRSS11DO60235 418 aa4.82□□□□□ -1.64
NEAT1-205ENST00000616315 RBMXL2O75526 392 aaKnown RBP4.82□□□□□ -1.64
NEAT1-205ENST00000616315 BAIAP3O94812 1187 aa4.82□□□□□ -1.64
NEAT1-205ENST00000616315 HEXIM1O94992 359 aaKnown RBP4.82□□□□□ -1.64
NEAT1-205ENST00000616315 TBX18O95935 607 aa4.82□□□□□ -1.64
NEAT1-205ENST00000616315 DLDP09622 509 aaKnown RBP4.82□□□□□ -1.64
NEAT1-205ENST00000616315 ATP1A3P13637 1013 aa4.82□□□□□ -1.64
NEAT1-205ENST00000616315 ALADP13716 330 aa4.82□□□□□ -1.64
NEAT1-205ENST00000616315 CTGFP29279 349 aa4.82□□□□□ -1.64
NEAT1-205ENST00000616315 PDE1AP54750 535 aa4.82□□□□□ -1.64
NEAT1-205ENST00000616315 NR1H2P55055 460 aa4.82□□□□□ -1.64
NEAT1-205ENST00000616315 FAM3BP58499 235 aaPredicted RBP4.82□□□□□ -1.64
NEAT1-205ENST00000616315 RBM6P78332 1123 aaKnown RBP4.82□□□□□ -1.64
NEAT1-205ENST00000616315 TXNL4AP83876 142 aaKnown RBP4.82□□□□□ -1.64
NEAT1-205ENST00000616315 E2F1Q01094 437 aa4.82□□□□□ -1.64
NEAT1-205ENST00000616315 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.82□□□□□ -1.64
NEAT1-205ENST00000616315 PTPRRQ15256 657 aa4.82□□□□□ -1.64
NEAT1-205ENST00000616315 TXNRD1Q16881 649 aa4.82□□□□□ -1.64
NEAT1-205ENST00000616315 NBPF8Q3BBV2 869 aa4.82□□□□□ -1.64
NEAT1-205ENST00000616315 ZNF484Q5JVG2 852 aa4.82□□□□□ -1.64
NEAT1-205ENST00000616315 DENND2CQ68D51 928 aa4.82□□□□□ -1.64
NEAT1-205ENST00000616315 DSTYKQ6XUX3 929 aa4.82□□□□□ -1.64
NEAT1-205ENST00000616315 SRRM1Q8IYB3 904 aaKnown RBP4.82□□□□□ -1.64
NEAT1-205ENST00000616315 TCP11L2Q8N4U5 519 aa4.82□□□□□ -1.64
NEAT1-205ENST00000616315 SIRT6Q8N6T7 355 aa4.82□□□□□ -1.64
NEAT1-205ENST00000616315 TSPYL6Q8N831 410 aa4.82□□□□□ -1.64
NEAT1-205ENST00000616315 PNPLA1Q8N8W4 532 aa4.82□□□□□ -1.64
NEAT1-205ENST00000616315 RP9Q8TA86 221 aaKnown RBP4.82□□□□□ -1.64
NEAT1-205ENST00000616315 SCARB1Q8WTV0 552 aa4.82□□□□□ -1.64
NEAT1-205ENST00000616315 CTHRC1Q96CG8 243 aa4.82□□□□□ -1.64
NEAT1-205ENST00000616315 RRP36Q96EU6 259 aaKnown RBP4.82□□□□□ -1.64
NEAT1-205ENST00000616315 PIGSQ96S52 555 aa4.82□□□□□ -1.64
NEAT1-205ENST00000616315 AIFM2Q9BRQ8 373 aa4.82□□□□□ -1.64
NEAT1-205ENST00000616315 TMX4Q9H1E5 349 aaPredicted RBP4.82□□□□□ -1.64
NEAT1-205ENST00000616315 SNX15Q9NRS6 342 aa4.82□□□□□ -1.64
NEAT1-205ENST00000616315 DKK3Q9UBP4 350 aa4.82□□□□□ -1.64
NEAT1-205ENST00000616315 CCNL1Q9UK58 526 aaPredicted RBP4.82□□□□□ -1.64
NEAT1-205ENST00000616315 TLK1Q9UKI8 766 aa4.82□□□□□ -1.64
NEAT1-205ENST00000616315 RAB21Q9UL25 225 aa4.82□□□□□ -1.64
NEAT1-205ENST00000616315 TRPC5Q9UL62 973 aaPredicted RBP4.82□□□□□ -1.64
NEAT1-205ENST00000616315 TBX20Q9UMR3 447 aa4.82□□□□□ -1.64
NEAT1-205ENST00000616315 ARHGAP26Q9UNA1 814 aa4.82□□□□□ -1.64
NEAT1-205ENST00000616315 AFG3L2Q9Y4W6 797 aa4.82□□□□□ -1.64
NEAT1-205ENST00000616315 SCINQ9Y6U3 715 aa4.82□□□□□ -1.64
NEAT1-205ENST00000616315 CCDC187A0A096LP49 1063 aa4.81□□□□□ -1.64
NEAT1-205ENST00000616315 DNAJC9-AS1A6NH13 148 aa4.81□□□□□ -1.64
NEAT1-205ENST00000616315 PROB1E7EW31 1015 aa4.81□□□□□ -1.64
NEAT1-205ENST00000616315 M0QZQ0 153 aa4.81□□□□□ -1.64
NEAT1-205ENST00000616315 MPPED1O15442 326 aa4.81□□□□□ -1.64
NEAT1-205ENST00000616315 HNRNPRO43390 633 aaKnown RBP4.81□□□□□ -1.64
NEAT1-205ENST00000616315 CA12O43570 354 aa4.81□□□□□ -1.64
NEAT1-205ENST00000616315 C1QL1O75973 258 aa4.81□□□□□ -1.64
NEAT1-205ENST00000616315 IFIT1P09914 478 aaKnown RBP4.81□□□□□ -1.64
NEAT1-205ENST00000616315 ZFXP17010 805 aaPredicted RBP4.81□□□□□ -1.64
NEAT1-205ENST00000616315 CAPN3P20807 821 aa4.81□□□□□ -1.64
NEAT1-205ENST00000616315 GRK5P34947 590 aa4.81□□□□□ -1.64
NEAT1-205ENST00000616315 EIF5P55010 431 aaKnown RBP4.81□□□□□ -1.64
NEAT1-205ENST00000616315 RPL15P61313 204 aaKnown RBP4.81□□□□□ -1.64
NEAT1-205ENST00000616315 BLOC1S1P78537 153 aa4.81□□□□□ -1.64
NEAT1-205ENST00000616315 NHLH1Q02575 133 aa4.81□□□□□ -1.64
NEAT1-205ENST00000616315 DNASE1L3Q13609 305 aa4.81□□□□□ -1.64
NEAT1-205ENST00000616315 DCTN1Q14203 1278 aa4.81□□□□□ -1.64
NEAT1-205ENST00000616315 FAM187BQ17R55 369 aa4.81□□□□□ -1.64
NEAT1-205ENST00000616315 C16orf89Q6UX73 402 aa4.81□□□□□ -1.64
NEAT1-205ENST00000616315 PTCHD4Q6ZW05 846 aa4.81□□□□□ -1.64
NEAT1-205ENST00000616315 Q6ZWC4 215 aa4.81□□□□□ -1.64
NEAT1-205ENST00000616315 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.81□□□□□ -1.64
NEAT1-205ENST00000616315 TBC1D1Q86TI0 1168 aaPredicted RBP4.81□□□□□ -1.64
NEAT1-205ENST00000616315 SLC44A3Q8N4M1 653 aa4.81□□□□□ -1.64
NEAT1-205ENST00000616315 FAM71DQ8N9W8 422 aa4.81□□□□□ -1.64
NEAT1-205ENST00000616315 ST8SIA4Q92187 359 aa4.81□□□□□ -1.64
NEAT1-205ENST00000616315 RFKQ969G6 155 aa4.81□□□□□ -1.64
NEAT1-205ENST00000616315 Q96MF0 132 aa4.81□□□□□ -1.64
NEAT1-205ENST00000616315 CINPQ9BW66 212 aaPredicted RBP4.81□□□□□ -1.64
NEAT1-205ENST00000616315 AGXT2Q9BYV1 514 aa4.81□□□□□ -1.64
NEAT1-205ENST00000616315 PLEKHA2Q9HB19 425 aa4.81□□□□□ -1.64
NEAT1-205ENST00000616315 IRAK4Q9NWZ3 460 aa4.81□□□□□ -1.64
NEAT1-205ENST00000616315 FBXO2Q9UK22 296 aaPredicted RBP4.81□□□□□ -1.64
NEAT1-205ENST00000616315 PCDHB2Q9Y5E7 798 aa4.81□□□□□ -1.64
NEAT1-205ENST00000616315 TBC1D3DA0A087WVF3 549 aa4.8□□□□□ -1.64
NEAT1-205ENST00000616315 TBC1D3IA0A087WXS9 549 aa4.8□□□□□ -1.64
NEAT1-205ENST00000616315 TBC1D3EA0A087X179 549 aa4.8□□□□□ -1.64
NEAT1-205ENST00000616315 TBC1D3KA0A087X1G2 549 aa4.8□□□□□ -1.64
NEAT1-205ENST00000616315 TBC1D3BA6NDS4 549 aa4.8□□□□□ -1.64
NEAT1-205ENST00000616315 TBC1D3FA6NER0 549 aaPredicted RBP4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms