RNA–Protein interactions for RNA: ENST00000616122.4

SYNCRIP-204, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,764 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-204ENST00000616122 RNF148Q8N7C7 305 aa5.79□□□□□ -1.48
SYNCRIP-204ENST00000616122 NIPA2Q8N8Q9 360 aa5.79□□□□□ -1.48
SYNCRIP-204ENST00000616122 B3GALNT2Q8NCR0 500 aa5.79□□□□□ -1.48
SYNCRIP-204ENST00000616122 PPP1R36Q96LQ0 422 aa5.79□□□□□ -1.48
SYNCRIP-204ENST00000616122 VAT1Q99536 393 aa5.79□□□□□ -1.48
SYNCRIP-204ENST00000616122 TRIM56Q9BRZ2 755 aaKnown RBP5.79□□□□□ -1.48
SYNCRIP-204ENST00000616122 BTBD10Q9BSF8 475 aa5.79□□□□□ -1.48
SYNCRIP-204ENST00000616122 MECRQ9BV79 373 aa5.79□□□□□ -1.48
SYNCRIP-204ENST00000616122 TRIM62Q9BVG3 475 aa5.79□□□□□ -1.48
SYNCRIP-204ENST00000616122 UPF3AQ9H1J1 476 aaKnown RBP5.79□□□□□ -1.48
SYNCRIP-204ENST00000616122 TCF7L2Q9NQB0 619 aa5.79□□□□□ -1.48
SYNCRIP-204ENST00000616122 DTLQ9NZJ0 730 aa5.79□□□□□ -1.48
SYNCRIP-204ENST00000616122 RABGEF1Q9UJ41 708 aa5.79□□□□□ -1.48
SYNCRIP-204ENST00000616122 ATXN2Q99700 1313 aaKnown RBP5.79□□□□□ -1.48
SYNCRIP-204ENST00000616122 AP3B1O00203 1094 aa5.79□□□□□ -1.48
SYNCRIP-204ENST00000616122 ANXA9O76027 345 aa5.79□□□□□ -1.48
SYNCRIP-204ENST00000616122 ERVK-10P10266 1014 aa5.79□□□□□ -1.48
SYNCRIP-204ENST00000616122 CCDC130P13994 396 aa5.79□□□□□ -1.48
SYNCRIP-204ENST00000616122 PAMP19021 973 aa5.79□□□□□ -1.48
SYNCRIP-204ENST00000616122 ASPAP45381 313 aa5.79□□□□□ -1.48
SYNCRIP-204ENST00000616122 MAP3K7CLP57077 242 aa5.79□□□□□ -1.48
SYNCRIP-204ENST00000616122 GPX6P59796 221 aa5.79□□□□□ -1.48
SYNCRIP-204ENST00000616122 RBBP5Q15291 538 aaKnown RBP5.79□□□□□ -1.48
SYNCRIP-204ENST00000616122 WASHC2DQ5SRD0 308 aa5.79□□□□□ -1.48
SYNCRIP-204ENST00000616122 KRT80Q6KB66 452 aa5.79□□□□□ -1.48
SYNCRIP-204ENST00000616122 IFNEQ86WN2 208 aa5.79□□□□□ -1.48
SYNCRIP-204ENST00000616122 NAT8LQ8N9F0 302 aa5.79□□□□□ -1.48
SYNCRIP-204ENST00000616122 CERS2Q96G23 380 aa5.79□□□□□ -1.48
SYNCRIP-204ENST00000616122 KATNAL1Q9BW62 490 aa5.79□□□□□ -1.48
SYNCRIP-204ENST00000616122 SLC4A5Q9BY07 1137 aa5.79□□□□□ -1.48
SYNCRIP-204ENST00000616122 ACE2Q9BYF1 805 aaPredicted RBP5.79□□□□□ -1.48
SYNCRIP-204ENST00000616122 NCKIPSDQ9NZQ3 722 aa5.79□□□□□ -1.48
SYNCRIP-204ENST00000616122 VANGL2Q9ULK5 521 aa5.79□□□□□ -1.48
SYNCRIP-204ENST00000616122 RPL26L1Q9UNX3 145 aaKnown RBP5.79□□□□□ -1.48
SYNCRIP-204ENST00000616122 KAT6AQ92794 2004 aa5.78□□□□□ -1.48
SYNCRIP-204ENST00000616122 CACNA1CQ13936 2221 aa5.78□□□□□ -1.48
SYNCRIP-204ENST00000616122 PKD1L3Q7Z443 1732 aa5.78□□□□□ -1.48
SYNCRIP-204ENST00000616122 IGKV6D-21A0A0A0MT36 114 aa5.78□□□□□ -1.48
SYNCRIP-204ENST00000616122 PFDN6O15212 129 aa5.78□□□□□ -1.48
SYNCRIP-204ENST00000616122 CDC25CP30307 473 aa5.78□□□□□ -1.48
SYNCRIP-204ENST00000616122 MAPRE1Q15691 268 aaKnown RBP5.78□□□□□ -1.48
SYNCRIP-204ENST00000616122 FAM83EQ2M2I3 478 aa5.78□□□□□ -1.48
SYNCRIP-204ENST00000616122 PRAMEF19Q5SWL8 479 aa5.78□□□□□ -1.48
SYNCRIP-204ENST00000616122 NOL9Q5SY16 702 aaKnown RBP5.78□□□□□ -1.48
SYNCRIP-204ENST00000616122 OVOS1Q6IE37 1185 aa5.78□□□□□ -1.48
SYNCRIP-204ENST00000616122 NEPROQ6NW34 567 aa5.78□□□□□ -1.48
SYNCRIP-204ENST00000616122 TTC30AQ86WT1 665 aa5.78□□□□□ -1.48
SYNCRIP-204ENST00000616122 SCUBE1Q8IWY4 988 aa5.78□□□□□ -1.48
SYNCRIP-204ENST00000616122 BANPQ8N9N5 519 aa5.78□□□□□ -1.48
SYNCRIP-204ENST00000616122 USP6NLQ92738 828 aa5.78□□□□□ -1.48
SYNCRIP-204ENST00000616122 GLT1D1Q96MS3 346 aa5.78□□□□□ -1.48
SYNCRIP-204ENST00000616122 RPRD1AQ96P16 312 aaPredicted RBP5.78□□□□□ -1.48
SYNCRIP-204ENST00000616122 TSC22D3Q99576 134 aa5.78□□□□□ -1.48
SYNCRIP-204ENST00000616122 SDCBP2Q9H190 292 aa5.78□□□□□ -1.48
SYNCRIP-204ENST00000616122 NR2E3Q9Y5X4 410 aa5.78□□□□□ -1.48
SYNCRIP-204ENST00000616122 SKAP2O75563 359 aaPredicted RBP5.78□□□□□ -1.48
SYNCRIP-204ENST00000616122 ZNF189O75820 626 aaPredicted RBP5.78□□□□□ -1.48
SYNCRIP-204ENST00000616122 DDHD2O94830 711 aa5.78□□□□□ -1.48
SYNCRIP-204ENST00000616122 PROCP04070 461 aa5.78□□□□□ -1.48
SYNCRIP-204ENST00000616122 ITGA2BP08514 1039 aa5.78□□□□□ -1.48
SYNCRIP-204ENST00000616122 PSMB4P28070 264 aa5.78□□□□□ -1.48
SYNCRIP-204ENST00000616122 CA8P35219 290 aa5.78□□□□□ -1.48
SYNCRIP-204ENST00000616122 SCNN1GP51170 649 aa5.78□□□□□ -1.48
SYNCRIP-204ENST00000616122 MAP7Q14244 749 aa5.78□□□□□ -1.48
SYNCRIP-204ENST00000616122 ACCSLQ4AC99 568 aa5.78□□□□□ -1.48
SYNCRIP-204ENST00000616122 SPATA24Q86W54 205 aa5.78□□□□□ -1.48
SYNCRIP-204ENST00000616122 PDCD6IPQ8WUM4 868 aaKnown RBP5.78□□□□□ -1.48
SYNCRIP-204ENST00000616122 MRPL45Q9BRJ2 306 aaKnown RBP5.78□□□□□ -1.48
SYNCRIP-204ENST00000616122 TUBGCP4Q9UGJ1 667 aa5.78□□□□□ -1.48
SYNCRIP-204ENST00000616122 DCDC2Q9UHG0 476 aa5.78□□□□□ -1.48
SYNCRIP-204ENST00000616122 FBXO5Q9UKT4 447 aa5.78□□□□□ -1.48
SYNCRIP-204ENST00000616122 ZNF142P52746 1687 aaPredicted RBP5.78□□□□□ -1.48
SYNCRIP-204ENST00000616122 NUP98P52948 1817 aa5.78□□□□□ -1.48
SYNCRIP-204ENST00000616122 SLC15A5A6NIM6 579 aa5.78□□□□□ -1.48
SYNCRIP-204ENST00000616122 PPEF2O14830 753 aa5.78□□□□□ -1.48
SYNCRIP-204ENST00000616122 PLIN3O60664 434 aa5.78□□□□□ -1.48
SYNCRIP-204ENST00000616122 SUPT7LO94864 414 aa5.78□□□□□ -1.48
SYNCRIP-204ENST00000616122 ACADSP16219 412 aa5.78□□□□□ -1.48
SYNCRIP-204ENST00000616122 KCNA3P22001 575 aa5.78□□□□□ -1.48
SYNCRIP-204ENST00000616122 CCR1P32246 355 aa5.78□□□□□ -1.48
SYNCRIP-204ENST00000616122 ATXN1P54253 815 aaKnown RBP5.78□□□□□ -1.48
SYNCRIP-204ENST00000616122 ZNF252P-AS1Q0IIN9 211 aa5.78□□□□□ -1.48
SYNCRIP-204ENST00000616122 ZNF235Q14590 738 aa5.78□□□□□ -1.48
SYNCRIP-204ENST00000616122 PCSK7Q16549 785 aa5.78□□□□□ -1.48
SYNCRIP-204ENST00000616122 PACS1Q6VY07 963 aa5.78□□□□□ -1.48
SYNCRIP-204ENST00000616122 CHSY1Q86X52 802 aa5.78□□□□□ -1.48
SYNCRIP-204ENST00000616122 TNS4Q8IZW8 715 aa5.78□□□□□ -1.48
SYNCRIP-204ENST00000616122 CRYBG2Q8N1P7 616 aa5.78□□□□□ -1.48
SYNCRIP-204ENST00000616122 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.78□□□□□ -1.48
SYNCRIP-204ENST00000616122 ACMSDQ8TDX5 336 aa5.78□□□□□ -1.48
SYNCRIP-204ENST00000616122 MFSD3Q96ES6 412 aa5.78□□□□□ -1.48
SYNCRIP-204ENST00000616122 COLEC11Q9BWP8 271 aa5.78□□□□□ -1.48
SYNCRIP-204ENST00000616122 RNF39Q9H2S5 420 aa5.78□□□□□ -1.48
SYNCRIP-204ENST00000616122 ARHGEF3Q9NR81 526 aa5.78□□□□□ -1.48
SYNCRIP-204ENST00000616122 RNF103-CHMP3A0A140T963 221 aa5.78□□□□□ -1.48
SYNCRIP-204ENST00000616122 TCRBV7S3A2A0A539 114 aa5.78□□□□□ -1.48
SYNCRIP-204ENST00000616122 CASTOR2A6NHX0 329 aa5.78□□□□□ -1.48
SYNCRIP-204ENST00000616122 TSPAN1O60635 241 aa5.78□□□□□ -1.48
SYNCRIP-204ENST00000616122 FAM155BO75949 473 aa5.78□□□□□ -1.48
SYNCRIP-204ENST00000616122 TOMM70O94826 608 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 246 ms