RNA–Protein interactions for RNA: ENST00000615843.4

SPAST-203, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-203ENST00000615843 NPTXRO95502 500 aa19.28■□□□□ 0.68
SPAST-203ENST00000615843 CAPN1P07384 714 aa19.28■□□□□ 0.68
SPAST-203ENST00000615843 FAM86B2P0C5J1 330 aa19.28■□□□□ 0.68
SPAST-203ENST00000615843 JAK1P23458 1154 aa19.28■□□□□ 0.68
SPAST-203ENST00000615843 BNIP1Q12981 228 aa19.28■□□□□ 0.68
SPAST-203ENST00000615843 CHSY1Q86X52 802 aa19.28■□□□□ 0.68
SPAST-203ENST00000615843 USP32Q8NFA0 1604 aa19.28■□□□□ 0.68
SPAST-203ENST00000615843 C2orf81A6NN90 581 aa19.28■□□□□ 0.68
SPAST-203ENST00000615843 H0YC42 278 aa19.28■□□□□ 0.68
SPAST-203ENST00000615843 CSE1LP55060 971 aaKnown RBP19.28■□□□□ 0.68
SPAST-203ENST00000615843 DDX39BQ13838 428 aaKnown RBP19.28■□□□□ 0.68
SPAST-203ENST00000615843 TTLL9Q3SXZ7 439 aa19.28■□□□□ 0.68
SPAST-203ENST00000615843 C8orf59Q8N0T1 100 aaPredicted RBP19.28■□□□□ 0.68
SPAST-203ENST00000615843 RAB42Q8N4Z0 105 aa19.28■□□□□ 0.68
SPAST-203ENST00000615843 UTP15Q8TED0 518 aaKnown RBP19.28■□□□□ 0.68
SPAST-203ENST00000615843 UBASH3BQ8TF42 649 aa19.28■□□□□ 0.68
SPAST-203ENST00000615843 SELENONQ9NZV5 590 aa19.28■□□□□ 0.68
SPAST-203ENST00000615843 LIMD1Q9UGP4 676 aa19.28■□□□□ 0.68
SPAST-203ENST00000615843 ERI2A8K979 691 aaKnown RBP19.28■□□□□ 0.68
SPAST-203ENST00000615843 TPP1O14773 563 aa19.28■□□□□ 0.68
SPAST-203ENST00000615843 HBP1O60381 514 aa19.28■□□□□ 0.68
SPAST-203ENST00000615843 GJB6O95452 261 aa19.28■□□□□ 0.68
SPAST-203ENST00000615843 UQCRBP14927 111 aa19.28■□□□□ 0.68
SPAST-203ENST00000615843 CRABP2P29373 138 aa19.28■□□□□ 0.68
SPAST-203ENST00000615843 FRG1Q14331 258 aaKnown RBP19.28■□□□□ 0.68
SPAST-203ENST00000615843 MPZL3Q6UWV2 235 aa19.28■□□□□ 0.68
SPAST-203ENST00000615843 CES3Q6UWW8 571 aa19.28■□□□□ 0.68
SPAST-203ENST00000615843 ENKURQ8TC29 256 aa19.28■□□□□ 0.68
SPAST-203ENST00000615843 POLR1BQ9H9Y6 1135 aa19.28■□□□□ 0.68
SPAST-203ENST00000615843 CRLS1Q9UJA2 301 aa19.28■□□□□ 0.68
SPAST-203ENST00000615843 MAP3K13O43283 966 aa19.28■□□□□ 0.68
SPAST-203ENST00000615843 LCA5LO95447 670 aa19.28■□□□□ 0.68
SPAST-203ENST00000615843 SERPINA6P08185 405 aa19.28■□□□□ 0.68
SPAST-203ENST00000615843 TALDO1P37837 337 aa19.28■□□□□ 0.68
SPAST-203ENST00000615843 TMEM62Q0P6H9 643 aa19.28■□□□□ 0.68
SPAST-203ENST00000615843 ZNF268Q14587 947 aaPredicted RBP19.28■□□□□ 0.68
SPAST-203ENST00000615843 TIGD7Q6NT04 549 aaPredicted RBP19.28■□□□□ 0.68
SPAST-203ENST00000615843 CDH24Q86UP0 819 aa19.28■□□□□ 0.68
SPAST-203ENST00000615843 IQGAP1P46940 1657 aa19.27■□□□□ 0.68
SPAST-203ENST00000615843 KCNQ2O43526 872 aa19.27■□□□□ 0.68
SPAST-203ENST00000615843 GAS2O43903 313 aaKnown RBP19.27■□□□□ 0.68
SPAST-203ENST00000615843 GUCA1CO95843 209 aa19.27■□□□□ 0.68
SPAST-203ENST00000615843 F9P00740 461 aa19.27■□□□□ 0.68
SPAST-203ENST00000615843 CDH17Q12864 832 aa19.27■□□□□ 0.68
SPAST-203ENST00000615843 MCRS1Q96EZ8 462 aa19.27■□□□□ 0.68
SPAST-203ENST00000615843 CCDC28BQ9BUN5 200 aa19.27■□□□□ 0.68
SPAST-203ENST00000615843 XPNPEP3Q9NQH7 507 aa19.27■□□□□ 0.68
SPAST-203ENST00000615843 CCDC154A6NI56 674 aa19.27■□□□□ 0.68
SPAST-203ENST00000615843 CYP1A2P05177 515 aa19.27■□□□□ 0.68
SPAST-203ENST00000615843 ICAM1P05362 532 aa19.27■□□□□ 0.68
SPAST-203ENST00000615843 HK2P52789 917 aa19.27■□□□□ 0.68
SPAST-203ENST00000615843 SMIM5Q71RC9 77 aa19.27■□□□□ 0.68
SPAST-203ENST00000615843 POLNQ7Z5Q5 900 aa19.27■□□□□ 0.68
SPAST-203ENST00000615843 ADCK2Q7Z695 626 aa19.27■□□□□ 0.68
SPAST-203ENST00000615843 TRABD2AQ86V40 505 aa19.27■□□□□ 0.68
SPAST-203ENST00000615843 C4orf19Q8IY42 314 aa19.27■□□□□ 0.68
SPAST-203ENST00000615843 MAGEE2Q8TD90 523 aaPredicted RBP19.27■□□□□ 0.68
SPAST-203ENST00000615843 RIBC2Q9H4K1 309 aa19.27■□□□□ 0.68
SPAST-203ENST00000615843 PNPLA3Q9NST1 481 aa19.27■□□□□ 0.68
SPAST-203ENST00000615843 SLC38A7Q9NVC3 462 aa19.27■□□□□ 0.68
SPAST-203ENST00000615843 ANAPC2Q9UJX6 822 aa19.27■□□□□ 0.68
SPAST-203ENST00000615843 KRT87PA6NCN2 255 aa19.27■□□□□ 0.68
SPAST-203ENST00000615843 LIASO43766 372 aa19.27■□□□□ 0.68
SPAST-203ENST00000615843 TPH1P17752 444 aa19.27■□□□□ 0.68
SPAST-203ENST00000615843 BCAT1P54687 386 aa19.27■□□□□ 0.68
SPAST-203ENST00000615843 SLC12A3P55017 1021 aa19.27■□□□□ 0.68
SPAST-203ENST00000615843 ALYREFQ86V81 257 aaKnown RBP19.27■□□□□ 0.68
SPAST-203ENST00000615843 PWWP2AQ96N64 755 aa19.27■□□□□ 0.68
SPAST-203ENST00000615843 MAP3K20Q9NYL2 800 aaKnown RBP19.27■□□□□ 0.68
SPAST-203ENST00000615843 TMCO1Q9UM00 188 aa19.27■□□□□ 0.68
SPAST-203ENST00000615843 SP100P23497 879 aaPredicted RBP19.27■□□□□ 0.67
SPAST-203ENST00000615843 POU6F1Q14863 301 aa19.27■□□□□ 0.67
SPAST-203ENST00000615843 C3orf67Q6ZVT6 689 aa19.27■□□□□ 0.67
SPAST-203ENST00000615843 OR7A2PQ8NGA2 310 aa19.27■□□□□ 0.67
SPAST-203ENST00000615843 OSBPL7Q9BZF2 842 aa19.27■□□□□ 0.67
SPAST-203ENST00000615843 IL17RBQ9NRM6 502 aa19.27■□□□□ 0.67
SPAST-203ENST00000615843 ARL8BQ9NVJ2 186 aa19.27■□□□□ 0.67
SPAST-203ENST00000615843 SPATA2Q9UM82 520 aa19.27■□□□□ 0.67
SPAST-203ENST00000615843 DUSP12Q9UNI6 340 aa19.27■□□□□ 0.67
SPAST-203ENST00000615843 IPPQ9Y573 584 aa19.27■□□□□ 0.67
SPAST-203ENST00000615843 PSMD12O00232 456 aaPredicted RBP19.26■□□□□ 0.67
SPAST-203ENST00000615843 CDH3P22223 829 aa19.26■□□□□ 0.67
SPAST-203ENST00000615843 SLC16A1P53985 500 aa19.26■□□□□ 0.67
SPAST-203ENST00000615843 MTTPP55157 894 aa19.26■□□□□ 0.67
SPAST-203ENST00000615843 BROXQ5VW32 411 aa19.26■□□□□ 0.67
SPAST-203ENST00000615843 SEPT12Q8IYM1 358 aa19.26■□□□□ 0.67
SPAST-203ENST00000615843 EFCAB3Q8N7B9 438 aa19.26■□□□□ 0.67
SPAST-203ENST00000615843 ITFG1Q8TB96 612 aa19.26■□□□□ 0.67
SPAST-203ENST00000615843 MBOAT7Q96N66 472 aa19.26■□□□□ 0.67
SPAST-203ENST00000615843 MID1IP1Q9NPA3 183 aa19.26■□□□□ 0.67
SPAST-203ENST00000615843 FAM25AB3EWG3 89 aa19.26■□□□□ 0.67
SPAST-203ENST00000615843 FAM25CB3EWG5 89 aa19.26■□□□□ 0.67
SPAST-203ENST00000615843 FAM25GB3EWG6 89 aa19.26■□□□□ 0.67
SPAST-203ENST00000615843 F8VP50 259 aa19.26■□□□□ 0.67
SPAST-203ENST00000615843 NCAM2O15394 837 aa19.26■□□□□ 0.67
SPAST-203ENST00000615843 GSC2O15499 205 aa19.26■□□□□ 0.67
SPAST-203ENST00000615843 DGCR6Q14129 220 aa19.26■□□□□ 0.67
SPAST-203ENST00000615843 ABRAXAS1Q6UWZ7 409 aa19.26■□□□□ 0.67
SPAST-203ENST00000615843 ARCQ7LC44 396 aa19.26■□□□□ 0.67
SPAST-203ENST00000615843 APOBEC3FQ8IUX4 373 aaKnown RBP19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms