RNA–Protein interactions for RNA: ENST00000614678.1

CPNE3-208, Transcript of copine 3, humanhuman

TSL 1 (best)

Gene CPNE3, Length 4,201 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-208ENST00000614678 ADIPOR2Q86V24 386 aa5.92□□□□□ -1.46
CPNE3-208ENST00000614678 KBTBD6Q86V97 674 aa5.92□□□□□ -1.46
CPNE3-208ENST00000614678 KIAA2013Q8IYS2 634 aa5.92□□□□□ -1.46
CPNE3-208ENST00000614678 ZNF513Q8N8E2 541 aaPredicted RBP5.92□□□□□ -1.46
CPNE3-208ENST00000614678 NEK11Q8NG66 645 aa5.92□□□□□ -1.46
CPNE3-208ENST00000614678 PNKPQ96T60 521 aa5.92□□□□□ -1.46
CPNE3-208ENST00000614678 POPDC2Q9HBU9 364 aa5.92□□□□□ -1.46
CPNE3-208ENST00000614678 KIAA1257Q9ULG3 409 aa5.92□□□□□ -1.46
CPNE3-208ENST00000614678 DDX3XO00571 662 aaKnown RBP eCLIP5.92□□□□□ -1.46
CPNE3-208ENST00000614678 IRAK2O43187 625 aa5.92□□□□□ -1.46
CPNE3-208ENST00000614678 CACNG3O60359 315 aa5.92□□□□□ -1.46
CPNE3-208ENST00000614678 PENKP01210 267 aaPredicted RBP5.92□□□□□ -1.46
CPNE3-208ENST00000614678 RRM1P23921 792 aa5.92□□□□□ -1.46
CPNE3-208ENST00000614678 PDE6CP51160 858 aa5.92□□□□□ -1.46
CPNE3-208ENST00000614678 SLC6A3Q01959 620 aa5.92□□□□□ -1.46
CPNE3-208ENST00000614678 CRY1Q16526 586 aa5.92□□□□□ -1.46
CPNE3-208ENST00000614678 POM121L1PQ3SYA9 428 aa5.92□□□□□ -1.46
CPNE3-208ENST00000614678 MS4A13Q5J8X5 152 aa5.92□□□□□ -1.46
CPNE3-208ENST00000614678 FKBP15Q5T1M5 1219 aa5.92□□□□□ -1.46
CPNE3-208ENST00000614678 KLHDC10Q6PID8 442 aa5.92□□□□□ -1.46
CPNE3-208ENST00000614678 TFAP2DQ7Z6R9 452 aa5.92□□□□□ -1.46
CPNE3-208ENST00000614678 TP53INP2Q8IXH6 220 aa5.92□□□□□ -1.46
CPNE3-208ENST00000614678 SPEM1Q8N4L4 309 aa5.92□□□□□ -1.46
CPNE3-208ENST00000614678 ARFGAP1Q8N6T3 406 aa5.92□□□□□ -1.46
CPNE3-208ENST00000614678 CCDC185Q8N715 623 aa5.92□□□□□ -1.46
CPNE3-208ENST00000614678 ZBTB44Q8NCP5 570 aa5.92□□□□□ -1.46
CPNE3-208ENST00000614678 LRRN4Q8WUT4 740 aa5.92□□□□□ -1.46
CPNE3-208ENST00000614678 CEP295NLQ96MC4 621 aa5.92□□□□□ -1.46
CPNE3-208ENST00000614678 CIPCQ9C0C6 399 aa5.92□□□□□ -1.46
CPNE3-208ENST00000614678 SYNCQ9H7C4 482 aa5.92□□□□□ -1.46
CPNE3-208ENST00000614678 DEC1Q9P2X7 70 aa5.92□□□□□ -1.46
CPNE3-208ENST00000614678 SLCO3A1Q9UIG8 710 aa5.92□□□□□ -1.46
CPNE3-208ENST00000614678 TMEM59LQ9UK28 342 aa5.92□□□□□ -1.46
CPNE3-208ENST00000614678 CABIN1Q9Y6J0 2220 aa5.92□□□□□ -1.46
CPNE3-208ENST00000614678 ASCC3Q8N3C0 2202 aaKnown RBP5.92□□□□□ -1.46
CPNE3-208ENST00000614678 A0A0D9SEW6 157 aa5.91□□□□□ -1.46
CPNE3-208ENST00000614678 K7ERQ8 282 aa5.91□□□□□ -1.46
CPNE3-208ENST00000614678 TRIM21P19474 475 aaKnown RBP5.91□□□□□ -1.46
CPNE3-208ENST00000614678 HOXD11P31277 338 aaPredicted RBP5.91□□□□□ -1.46
CPNE3-208ENST00000614678 PTGER3P43115 390 aa5.91□□□□□ -1.46
CPNE3-208ENST00000614678 DGKGP49619 791 aa5.91□□□□□ -1.46
CPNE3-208ENST00000614678 DGKEP52429 567 aa5.91□□□□□ -1.46
CPNE3-208ENST00000614678 PTPN5P54829 565 aa5.91□□□□□ -1.46
CPNE3-208ENST00000614678 UBASH3AP57075 661 aa5.91□□□□□ -1.46
CPNE3-208ENST00000614678 CDR2Q01850 454 aa5.91□□□□□ -1.46
CPNE3-208ENST00000614678 ZNF252P-AS1Q0IIN9 211 aa5.91□□□□□ -1.46
CPNE3-208ENST00000614678 PTPRNQ16849 979 aa5.91□□□□□ -1.46
CPNE3-208ENST00000614678 HGSNATQ68CP4 663 aa5.91□□□□□ -1.46
CPNE3-208ENST00000614678 FBXL22Q6P050 247 aa5.91□□□□□ -1.46
CPNE3-208ENST00000614678 KDM7AQ6ZMT4 941 aa5.91□□□□□ -1.46
CPNE3-208ENST00000614678 ERICH1Q86X53 443 aa5.91□□□□□ -1.46
CPNE3-208ENST00000614678 LGI2Q8N0V4 545 aa5.91□□□□□ -1.46
CPNE3-208ENST00000614678 UBE2Q2Q8WVN8 375 aa5.91□□□□□ -1.46
CPNE3-208ENST00000614678 MYO19Q96H55 970 aa5.91□□□□□ -1.46
CPNE3-208ENST00000614678 SLC2A13Q96QE2 648 aa5.91□□□□□ -1.46
CPNE3-208ENST00000614678 BPIFA3Q9BQP9 254 aa5.91□□□□□ -1.46
CPNE3-208ENST00000614678 PACSIN1Q9BY11 444 aa5.91□□□□□ -1.46
CPNE3-208ENST00000614678 TMEM74BQ9NUR3 256 aa5.91□□□□□ -1.46
CPNE3-208ENST00000614678 GPATCH2LQ9NWQ4 482 aa5.91□□□□□ -1.46
CPNE3-208ENST00000614678 HS3ST4Q9Y661 456 aa5.91□□□□□ -1.46
CPNE3-208ENST00000614678 TPRP12270 2363 aaKnown RBP5.91□□□□□ -1.46
CPNE3-208ENST00000614678 TCRBV21S2A2A0A5A6 115 aa5.91□□□□□ -1.46
CPNE3-208ENST00000614678 HOXC11O43248 304 aaPredicted RBP5.91□□□□□ -1.46
CPNE3-208ENST00000614678 ENDOD1O94919 500 aa5.91□□□□□ -1.46
CPNE3-208ENST00000614678 ADH1CP00326 375 aa5.91□□□□□ -1.46
CPNE3-208ENST00000614678 MT-CO1P00395 513 aa5.91□□□□□ -1.46
CPNE3-208ENST00000614678 MAOBP27338 520 aa5.91□□□□□ -1.46
CPNE3-208ENST00000614678 CASP14P31944 242 aa5.91□□□□□ -1.46
CPNE3-208ENST00000614678 NBL1P41271 181 aa5.91□□□□□ -1.46
CPNE3-208ENST00000614678 ADKP55263 362 aaKnown RBP5.91□□□□□ -1.46
CPNE3-208ENST00000614678 COG7P83436 770 aa5.91□□□□□ -1.46
CPNE3-208ENST00000614678 GAD2Q05329 585 aa5.91□□□□□ -1.46
CPNE3-208ENST00000614678 LMAN2Q12907 356 aa5.91□□□□□ -1.46
CPNE3-208ENST00000614678 ARID5BQ14865 1188 aa5.91□□□□□ -1.46
CPNE3-208ENST00000614678 CCDC14Q49A88 953 aa5.91□□□□□ -1.46
CPNE3-208ENST00000614678 ADGRF1Q5T601 910 aa5.91□□□□□ -1.46
CPNE3-208ENST00000614678 TXNRD3NBQ6F5E7 133 aa5.91□□□□□ -1.46
CPNE3-208ENST00000614678 ENOSF1Q7L5Y1 443 aa5.91□□□□□ -1.46
CPNE3-208ENST00000614678 CHPFQ8IZ52 775 aa5.91□□□□□ -1.46
CPNE3-208ENST00000614678 CARNMT1Q8N4J0 409 aa5.91□□□□□ -1.46
CPNE3-208ENST00000614678 OR2I1PQ8NGU4 316 aa5.91□□□□□ -1.46
CPNE3-208ENST00000614678 C18orf8Q96DM3 657 aa5.91□□□□□ -1.46
CPNE3-208ENST00000614678 PRMT1Q99873 361 aaKnown RBP5.91□□□□□ -1.46
CPNE3-208ENST00000614678 TKTL2Q9H0I9 626 aa5.91□□□□□ -1.46
CPNE3-208ENST00000614678 LHX5Q9H2C1 402 aa5.91□□□□□ -1.46
CPNE3-208ENST00000614678 FAM204AQ9H8W3 233 aa5.91□□□□□ -1.46
CPNE3-208ENST00000614678 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.91□□□□□ -1.46
CPNE3-208ENST00000614678 TCRBV5S1A1TA0A578 114 aa5.91□□□□□ -1.46
CPNE3-208ENST00000614678 KCNU1A8MYU2 1149 aa5.91□□□□□ -1.46
CPNE3-208ENST00000614678 AXIN1O15169 862 aa5.91□□□□□ -1.46
CPNE3-208ENST00000614678 MED7O43513 233 aa5.91□□□□□ -1.46
CPNE3-208ENST00000614678 ACSL4O60488 711 aa5.91□□□□□ -1.46
CPNE3-208ENST00000614678 SRGAP2O75044 1071 aa5.91□□□□□ -1.46
CPNE3-208ENST00000614678 PAGE1O75459 146 aa5.91□□□□□ -1.46
CPNE3-208ENST00000614678 TGM1P22735 817 aa5.91□□□□□ -1.46
CPNE3-208ENST00000614678 MMP8P22894 467 aa5.91□□□□□ -1.46
CPNE3-208ENST00000614678 CDH5P33151 784 aaPredicted RBP5.91□□□□□ -1.46
CPNE3-208ENST00000614678 SULT1E1P49888 294 aa5.91□□□□□ -1.46
CPNE3-208ENST00000614678 SPEM2Q0P670 501 aa5.91□□□□□ -1.46
CPNE3-208ENST00000614678 ZNF234Q14588 700 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms