RNA–Protein interactions for RNA: ENST00000614484.4

SRRT-215, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRRT, Length 2,964 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-215ENST00000614484 TMEM59LQ9UK28 342 aa12.42□□□□□ -0.42
SRRT-215ENST00000614484 RIMKLBQ9ULI2 386 aa12.42□□□□□ -0.42
SRRT-215ENST00000614484 PCDHGB3Q9Y5G1 929 aa12.42□□□□□ -0.42
SRRT-215ENST00000614484 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.42□□□□□ -0.42
SRRT-215ENST00000614484 SSU72P8A0A1W2PR75 194 aa12.42□□□□□ -0.42
SRRT-215ENST00000614484 CYB561D2O14569 222 aa12.42□□□□□ -0.42
SRRT-215ENST00000614484 EOMESO95936 686 aa12.42□□□□□ -0.42
SRRT-215ENST00000614484 SHBGP04278 402 aa12.42□□□□□ -0.42
SRRT-215ENST00000614484 GBP1P32455 592 aa12.42□□□□□ -0.42
SRRT-215ENST00000614484 ALDH7A1P49419 539 aaKnown RBP12.42□□□□□ -0.42
SRRT-215ENST00000614484 UPP1Q16831 310 aa12.42□□□□□ -0.42
SRRT-215ENST00000614484 TMEM214Q6NUQ4 689 aaKnown RBP12.42□□□□□ -0.42
SRRT-215ENST00000614484 PDXDC1Q6P996 788 aa12.42□□□□□ -0.42
SRRT-215ENST00000614484 TMEM154Q6P9G4 183 aa12.42□□□□□ -0.42
SRRT-215ENST00000614484 LVRNQ6Q4G3 990 aa12.42□□□□□ -0.42
SRRT-215ENST00000614484 ACOT1Q86TX2 421 aa12.42□□□□□ -0.42
SRRT-215ENST00000614484 VPS36Q86VN1 386 aa12.42□□□□□ -0.42
SRRT-215ENST00000614484 NCSTNQ92542 709 aa12.42□□□□□ -0.42
SRRT-215ENST00000614484 GIMAP5Q96F15 307 aa12.42□□□□□ -0.42
SRRT-215ENST00000614484 TMEM209Q96SK2 561 aa12.42□□□□□ -0.42
SRRT-215ENST00000614484 RHOBTB2Q9BYZ6 727 aa12.42□□□□□ -0.42
SRRT-215ENST00000614484 FAM192AQ9GZU8 254 aa12.42□□□□□ -0.42
SRRT-215ENST00000614484 GANQ9H2C0 597 aa12.42□□□□□ -0.42
SRRT-215ENST00000614484 NOX1Q9Y5S8 564 aa12.42□□□□□ -0.42
SRRT-215ENST00000614484 ABHD14A-ACY1A0A1B0GW23 586 aa12.41□□□□□ -0.42
SRRT-215ENST00000614484 ASS1P00966 412 aaKnown RBP12.41□□□□□ -0.42
SRRT-215ENST00000614484 CA3P07451 260 aa12.41□□□□□ -0.42
SRRT-215ENST00000614484 DSTNP60981 165 aa12.41□□□□□ -0.42
SRRT-215ENST00000614484 DPY19L2P1Q6NXN4 242 aa12.41□□□□□ -0.42
SRRT-215ENST00000614484 ZNF449Q6P9G9 518 aa12.41□□□□□ -0.42
SRRT-215ENST00000614484 TRIM31Q9BZY9 425 aa12.41□□□□□ -0.42
SRRT-215ENST00000614484 PLEKHA5Q9HAU0 1116 aa12.41□□□□□ -0.42
SRRT-215ENST00000614484 CISHQ9NSE2 258 aa12.41□□□□□ -0.42
SRRT-215ENST00000614484 TBCCD1Q9NVR7 557 aa12.41□□□□□ -0.42
SRRT-215ENST00000614484 AMACRQ9UHK6 382 aa12.41□□□□□ -0.42
SRRT-215ENST00000614484 TRIOO75962 3097 aa12.41□□□□□ -0.42
SRRT-215ENST00000614484 RFXAPO00287 272 aa12.41□□□□□ -0.42
SRRT-215ENST00000614484 KRIT1O00522 736 aa12.41□□□□□ -0.42
SRRT-215ENST00000614484 KCNE1P15382 129 aa12.41□□□□□ -0.42
SRRT-215ENST00000614484 ASPAP45381 313 aa12.41□□□□□ -0.42
SRRT-215ENST00000614484 TBX4P57082 545 aa12.41□□□□□ -0.42
SRRT-215ENST00000614484 CLDN10P78369 228 aa12.41□□□□□ -0.42
SRRT-215ENST00000614484 TUSC3Q13454 348 aa12.41□□□□□ -0.42
SRRT-215ENST00000614484 CUL2Q13617 745 aa12.41□□□□□ -0.42
SRRT-215ENST00000614484 ACAP1Q15027 740 aa12.41□□□□□ -0.42
SRRT-215ENST00000614484 PTPROQ16827 1216 aa12.41□□□□□ -0.42
SRRT-215ENST00000614484 SOWAHAQ2M3V2 549 aa12.41□□□□□ -0.42
SRRT-215ENST00000614484 ASTE1Q2TB18 679 aaPredicted RBP12.41□□□□□ -0.42
SRRT-215ENST00000614484 FAM171A1Q5VUB5 890 aa12.41□□□□□ -0.42
SRRT-215ENST00000614484 HAUS1Q96CS2 278 aa12.41□□□□□ -0.42
SRRT-215ENST00000614484 ERP44Q9BS26 406 aa12.41□□□□□ -0.42
SRRT-215ENST00000614484 C17orf80Q9BSJ5 609 aa12.41□□□□□ -0.42
SRRT-215ENST00000614484 WDR70Q9NW82 654 aa12.41□□□□□ -0.42
SRRT-215ENST00000614484 USP15Q9Y4E8 981 aaPredicted RBP12.41□□□□□ -0.42
SRRT-215ENST00000614484 NME7Q9Y5B8 376 aa12.41□□□□□ -0.42
SRRT-215ENST00000614484 RGS16O15492 202 aaPredicted RBP12.4□□□□□ -0.42
SRRT-215ENST00000614484 SNX3O60493 162 aa12.4□□□□□ -0.42
SRRT-215ENST00000614484 SUN1O94901 812 aa12.4□□□□□ -0.42
SRRT-215ENST00000614484 GJB5O95377 273 aa12.4□□□□□ -0.42
SRRT-215ENST00000614484 SPATA31D3P0C874 917 aa12.4□□□□□ -0.42
SRRT-215ENST00000614484 TCF3P15923 654 aa12.4□□□□□ -0.42
SRRT-215ENST00000614484 PDCD4Q53EL6 469 aaKnown RBP12.4□□□□□ -0.42
SRRT-215ENST00000614484 NEK5Q6P3R8 708 aa12.4□□□□□ -0.42
SRRT-215ENST00000614484 KLC3Q6P597 504 aa12.4□□□□□ -0.42
SRRT-215ENST00000614484 PRSS55Q6UWB4 352 aaPredicted RBP12.4□□□□□ -0.42
SRRT-215ENST00000614484 SPATA31D4Q6ZUB0 917 aa12.4□□□□□ -0.42
SRRT-215ENST00000614484 AZIN2Q96A70 460 aa12.4□□□□□ -0.42
SRRT-215ENST00000614484 PBKQ96KB5 322 aa12.4□□□□□ -0.42
SRRT-215ENST00000614484 SENP8Q96LD8 212 aa12.4□□□□□ -0.42
SRRT-215ENST00000614484 SCHIP1Q9P0W5 487 aaPredicted RBP12.4□□□□□ -0.42
SRRT-215ENST00000614484 PGRMC1O00264 195 aaKnown RBP12.4□□□□□ -0.42
SRRT-215ENST00000614484 HGSO14964 777 aaPredicted RBP12.4□□□□□ -0.42
SRRT-215ENST00000614484 MAPK13O15264 365 aa12.4□□□□□ -0.42
SRRT-215ENST00000614484 MAN1A1P33908 653 aa12.4□□□□□ -0.42
SRRT-215ENST00000614484 MMP13P45452 471 aa12.4□□□□□ -0.42
SRRT-215ENST00000614484 TAF6P49848 677 aa12.4□□□□□ -0.42
SRRT-215ENST00000614484 LSAMPQ13449 338 aa12.4□□□□□ -0.42
SRRT-215ENST00000614484 ARL13BQ3SXY8 428 aa12.4□□□□□ -0.42
SRRT-215ENST00000614484 COLGALT2Q8IYK4 626 aa12.4□□□□□ -0.42
SRRT-215ENST00000614484 BAP1Q92560 729 aa12.4□□□□□ -0.42
SRRT-215ENST00000614484 TBC1D20Q96BZ9 403 aa12.4□□□□□ -0.42
SRRT-215ENST00000614484 SDCCAG3Q96C92 435 aa12.4□□□□□ -0.42
SRRT-215ENST00000614484 GPR88Q9GZN0 384 aa12.4□□□□□ -0.42
SRRT-215ENST00000614484 ARHGEF3Q9NR81 526 aa12.4□□□□□ -0.42
SRRT-215ENST00000614484 FAM114A2Q9NRY5 505 aa12.4□□□□□ -0.42
SRRT-215ENST00000614484 ITGA11Q9UKX5 1188 aa12.4□□□□□ -0.42
SRRT-215ENST00000614484 TRIM33Q9UPN9 1127 aa12.4□□□□□ -0.42
SRRT-215ENST00000614484 A8MXQ7 604 aa12.39□□□□□ -0.43
SRRT-215ENST00000614484 CLDN5O00501 218 aa12.39□□□□□ -0.43
SRRT-215ENST00000614484 MUSKO15146 869 aa12.39□□□□□ -0.43
SRRT-215ENST00000614484 TMCC2O75069 709 aa12.39□□□□□ -0.43
SRRT-215ENST00000614484 SEC24DO94855 1032 aaPredicted RBP12.39□□□□□ -0.43
SRRT-215ENST00000614484 NDST1P52848 882 aa12.39□□□□□ -0.43
SRRT-215ENST00000614484 RAD23BP54727 409 aa12.39□□□□□ -0.43
SRRT-215ENST00000614484 IFRD2Q12894 506 aaPredicted RBP12.39□□□□□ -0.43
SRRT-215ENST00000614484 TOMM20Q15388 145 aa12.39□□□□□ -0.43
SRRT-215ENST00000614484 SURF1Q15526 300 aa12.39□□□□□ -0.43
SRRT-215ENST00000614484 FOXR2Q6PJQ5 311 aa12.39□□□□□ -0.43
SRRT-215ENST00000614484 HERC6Q8IVU3 1022 aa12.39□□□□□ -0.43
SRRT-215ENST00000614484 SPARTQ8N0X7 666 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms