RNA–Protein interactions for RNA: ENST00000614398.4

CBWD3-210, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,563 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-210ENST00000614398 SMRP1Q8NCR6 262 aa6.47□□□□□ -1.37
CBWD3-210ENST00000614398 ADAMTS19Q8TE59 1207 aa6.47□□□□□ -1.37
CBWD3-210ENST00000614398 RPGRIP1Q96KN7 1286 aa6.47□□□□□ -1.37
CBWD3-210ENST00000614398 WDCPQ9H6R7 721 aa6.47□□□□□ -1.37
CBWD3-210ENST00000614398 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.47□□□□□ -1.37
CBWD3-210ENST00000614398 RASAL2Q9UJF2 1139 aa6.47□□□□□ -1.37
CBWD3-210ENST00000614398 NEU3Q9UQ49 428 aa6.47□□□□□ -1.37
CBWD3-210ENST00000614398 MRFAP1Q9Y605 127 aa6.47□□□□□ -1.37
CBWD3-210ENST00000614398 DOCK4Q8N1I0 1966 aa6.47□□□□□ -1.37
CBWD3-210ENST00000614398 CHD5Q8TDI0 1954 aa6.47□□□□□ -1.37
CBWD3-210ENST00000614398 TRANK1O15050 2925 aa6.47□□□□□ -1.37
CBWD3-210ENST00000614398 hCG_1818297A0A087WSY0 165 aa6.46□□□□□ -1.38
CBWD3-210ENST00000614398 SLC12A8A0AV02 714 aa6.46□□□□□ -1.38
CBWD3-210ENST00000614398 C2orf78A6NCI8 922 aa6.46□□□□□ -1.38
CBWD3-210ENST00000614398 H3BRJ5 948 aa6.46□□□□□ -1.38
CBWD3-210ENST00000614398 ZRANB2O95218 330 aaKnown RBP eCLIP6.46□□□□□ -1.38
CBWD3-210ENST00000614398 MYL4P12829 197 aa6.46□□□□□ -1.38
CBWD3-210ENST00000614398 TCF4P15884 667 aa6.46□□□□□ -1.38
CBWD3-210ENST00000614398 MARCKSL1P49006 195 aa6.46□□□□□ -1.38
CBWD3-210ENST00000614398 GYS2P54840 703 aa6.46□□□□□ -1.38
CBWD3-210ENST00000614398 MLLT6P55198 1093 aaPredicted RBP6.46□□□□□ -1.38
CBWD3-210ENST00000614398 EFEMP1Q12805 493 aa6.46□□□□□ -1.38
CBWD3-210ENST00000614398 KLF1Q13351 362 aaPredicted RBP6.46□□□□□ -1.38
CBWD3-210ENST00000614398 SMAD4Q13485 552 aaKnown RBP6.46□□□□□ -1.38
CBWD3-210ENST00000614398 DPYSQ14117 519 aa6.46□□□□□ -1.38
CBWD3-210ENST00000614398 TFDP2Q14188 446 aa6.46□□□□□ -1.38
CBWD3-210ENST00000614398 DPYSL3Q14195 570 aa6.46□□□□□ -1.38
CBWD3-210ENST00000614398 TEAD2Q15562 447 aa6.46□□□□□ -1.38
CBWD3-210ENST00000614398 ZNF77Q15935 545 aa6.46□□□□□ -1.38
CBWD3-210ENST00000614398 CYP1B1Q16678 543 aa6.46□□□□□ -1.38
CBWD3-210ENST00000614398 SLC5A9Q2M3M2 681 aa6.46□□□□□ -1.38
CBWD3-210ENST00000614398 PUS10Q3MIT2 529 aaKnown RBP6.46□□□□□ -1.38
CBWD3-210ENST00000614398 ZC3H12AQ5D1E8 599 aaKnown RBP6.46□□□□□ -1.38
CBWD3-210ENST00000614398 TFDP3Q5H9I0 405 aa6.46□□□□□ -1.38
CBWD3-210ENST00000614398 RARS2Q5T160 578 aaKnown RBP6.46□□□□□ -1.38
CBWD3-210ENST00000614398 MPP7Q5T2T1 576 aa6.46□□□□□ -1.38
CBWD3-210ENST00000614398 SEL1L2Q5TEA6 688 aa6.46□□□□□ -1.38
CBWD3-210ENST00000614398 SLC9A4Q6AI14 798 aa6.46□□□□□ -1.38
CBWD3-210ENST00000614398 CES5AQ6NT32 575 aa6.46□□□□□ -1.38
CBWD3-210ENST00000614398 DRICH1Q6PGQ1 229 aaPredicted RBP6.46□□□□□ -1.38
CBWD3-210ENST00000614398 BBS12Q6ZW61 710 aa6.46□□□□□ -1.38
CBWD3-210ENST00000614398 CHST9Q7L1S5 443 aa6.46□□□□□ -1.38
CBWD3-210ENST00000614398 RBM23Q86U06 439 aaKnown RBP6.46□□□□□ -1.38
CBWD3-210ENST00000614398 CREG2Q8IUH2 290 aa6.46□□□□□ -1.38
CBWD3-210ENST00000614398 FATE1Q969F0 183 aa6.46□□□□□ -1.38
CBWD3-210ENST00000614398 KCTD15Q96SI1 283 aaPredicted RBP6.46□□□□□ -1.38
CBWD3-210ENST00000614398 EPAS1Q99814 870 aa6.46□□□□□ -1.38
CBWD3-210ENST00000614398 SLC46A2Q9BY10 475 aa6.46□□□□□ -1.38
CBWD3-210ENST00000614398 RNF38Q9H0F5 515 aa6.46□□□□□ -1.38
CBWD3-210ENST00000614398 ATXN3LQ9H3M9 355 aa6.46□□□□□ -1.38
CBWD3-210ENST00000614398 HCFC1R1Q9NWW0 138 aa6.46□□□□□ -1.38
CBWD3-210ENST00000614398 EPS15L1Q9UBC2 864 aa6.46□□□□□ -1.38
CBWD3-210ENST00000614398 CD207Q9UJ71 328 aa6.46□□□□□ -1.38
CBWD3-210ENST00000614398 USTQ9Y2C2 406 aa6.46□□□□□ -1.38
CBWD3-210ENST00000614398 KIAA1549LQ6ZVL6 1849 aa6.46□□□□□ -1.38
CBWD3-210ENST00000614398 A0A1W2PRU2 124 aa6.46□□□□□ -1.38
CBWD3-210ENST00000614398 H0YHG0 523 aa6.46□□□□□ -1.38
CBWD3-210ENST00000614398 I6L893 689 aaPredicted RBP6.46□□□□□ -1.38
CBWD3-210ENST00000614398 PGRMC1O00264 195 aaKnown RBP6.46□□□□□ -1.38
CBWD3-210ENST00000614398 LINC01565O15544 149 aa6.46□□□□□ -1.38
CBWD3-210ENST00000614398 ACSL4O60488 711 aa6.46□□□□□ -1.38
CBWD3-210ENST00000614398 KRT1P04264 644 aa6.46□□□□□ -1.38
CBWD3-210ENST00000614398 CEBPBP17676 345 aa6.46□□□□□ -1.38
CBWD3-210ENST00000614398 HDCP19113 662 aa6.46□□□□□ -1.38
CBWD3-210ENST00000614398 TGM2P21980 687 aa6.46□□□□□ -1.38
CBWD3-210ENST00000614398 IL4RP24394 825 aa6.46□□□□□ -1.38
CBWD3-210ENST00000614398 SLC11A2P49281 568 aa6.46□□□□□ -1.38
CBWD3-210ENST00000614398 TUBB4BP68371 445 aa6.46□□□□□ -1.38
CBWD3-210ENST00000614398 SARNPP82979 210 aaKnown RBP6.46□□□□□ -1.38
CBWD3-210ENST00000614398 ZNF33AQ06730 810 aa6.46□□□□□ -1.38
CBWD3-210ENST00000614398 IFRD2Q12894 506 aaPredicted RBP6.46□□□□□ -1.38
CBWD3-210ENST00000614398 RAB6CQ53S08 254 aa6.46□□□□□ -1.38
CBWD3-210ENST00000614398 DNAJC21Q5F1R6 531 aaKnown RBP6.46□□□□□ -1.38
CBWD3-210ENST00000614398 ATAT1Q5SQI0 421 aa6.46□□□□□ -1.38
CBWD3-210ENST00000614398 GPR158Q5T848 1215 aa6.46□□□□□ -1.38
CBWD3-210ENST00000614398 TXNRD3NBQ6F5E7 133 aa6.46□□□□□ -1.38
CBWD3-210ENST00000614398 ZNF783Q6ZMS7 281 aa6.46□□□□□ -1.38
CBWD3-210ENST00000614398 GRASPQ7Z6J2 395 aaPredicted RBP6.46□□□□□ -1.38
CBWD3-210ENST00000614398 FAM131BQ86XD5 332 aa6.46□□□□□ -1.38
CBWD3-210ENST00000614398 SLC13A5Q86YT5 568 aaPredicted RBP6.46□□□□□ -1.38
CBWD3-210ENST00000614398 NPAS3Q8IXF0 933 aa6.46□□□□□ -1.38
CBWD3-210ENST00000614398 TCEAL4Q96EI5 215 aa6.46□□□□□ -1.38
CBWD3-210ENST00000614398 TKTL2Q9H0I9 626 aa6.46□□□□□ -1.38
CBWD3-210ENST00000614398 RAB6CQ9H0N0 254 aa6.46□□□□□ -1.38
CBWD3-210ENST00000614398 GOLPH3Q9H4A6 298 aa6.46□□□□□ -1.38
CBWD3-210ENST00000614398 PIDD1Q9HB75 910 aa6.46□□□□□ -1.38
CBWD3-210ENST00000614398 HOMER3Q9NSC5 361 aa6.46□□□□□ -1.38
CBWD3-210ENST00000614398 MARK1Q9P0L2 795 aa6.46□□□□□ -1.38
CBWD3-210ENST00000614398 SFMBT1Q9UHJ3 866 aa6.46□□□□□ -1.38
CBWD3-210ENST00000614398 CDH7Q9ULB5 785 aa6.46□□□□□ -1.38
CBWD3-210ENST00000614398 MRPS23Q9Y3D9 190 aaKnown RBP6.46□□□□□ -1.38
CBWD3-210ENST00000614398 COL4A3Q01955 1670 aa6.46□□□□□ -1.38
CBWD3-210ENST00000614398 CEP290O15078 2479 aa6.45□□□□□ -1.38
CBWD3-210ENST00000614398 CCDC188H7C350 402 aa6.45□□□□□ -1.38
CBWD3-210ENST00000614398 NRG2O14511 850 aaPredicted RBP6.45□□□□□ -1.38
CBWD3-210ENST00000614398 KCNK3O14649 394 aa6.45□□□□□ -1.38
CBWD3-210ENST00000614398 SLC9A3R1O14745 358 aaPredicted RBP6.45□□□□□ -1.38
CBWD3-210ENST00000614398 COQ9O75208 318 aa6.45□□□□□ -1.38
CBWD3-210ENST00000614398 PAGE1O75459 146 aa6.45□□□□□ -1.38
CBWD3-210ENST00000614398 PYGMP11217 842 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms