RNA–Protein interactions for RNA: ENST00000612930.1

TSKU-205, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 4 BASIC

Gene TSKU, Length 2,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-205ENST00000612930 EPS15L1Q9UBC2 864 aa17.04■□□□□ 0.32
TSKU-205ENST00000612930 USP18Q9UMW8 372 aa17.04■□□□□ 0.32
TSKU-205ENST00000612930 PCDHGC3Q9UN70 934 aa17.04■□□□□ 0.32
TSKU-205ENST00000612930 PCDHA11Q9Y5I1 949 aa17.04■□□□□ 0.32
TSKU-205ENST00000612930 H0YIN7 160 aa17.04■□□□□ 0.32
TSKU-205ENST00000612930 RNASEH2AO75792 299 aaKnown RBP17.04■□□□□ 0.32
TSKU-205ENST00000612930 ENDOD1O94919 500 aa17.04■□□□□ 0.32
TSKU-205ENST00000612930 ATG7O95352 703 aa17.04■□□□□ 0.32
TSKU-205ENST00000612930 TFPTP0C1Z6 253 aa17.04■□□□□ 0.32
TSKU-205ENST00000612930 IDO1P14902 403 aa17.04■□□□□ 0.32
TSKU-205ENST00000612930 PTPN1P18031 435 aaKnown RBP17.04■□□□□ 0.32
TSKU-205ENST00000612930 HSPA1LP34931 641 aa17.04■□□□□ 0.32
TSKU-205ENST00000612930 MLH1P40692 756 aa17.04■□□□□ 0.32
TSKU-205ENST00000612930 MAGEA6P43360 314 aa17.04■□□□□ 0.32
TSKU-205ENST00000612930 CCR3P51677 355 aa17.04■□□□□ 0.32
TSKU-205ENST00000612930 JAK3P52333 1124 aa17.04■□□□□ 0.32
TSKU-205ENST00000612930 NDST2P52849 883 aa17.04■□□□□ 0.32
TSKU-205ENST00000612930 PSMC1P62191 440 aaKnown RBP17.04■□□□□ 0.32
TSKU-205ENST00000612930 SEZ6Q53EL9 994 aa17.04■□□□□ 0.32
TSKU-205ENST00000612930 BNC2Q6ZN30 1099 aaPredicted RBP17.04■□□□□ 0.32
TSKU-205ENST00000612930 SP8Q8IXZ3 490 aa17.04■□□□□ 0.32
TSKU-205ENST00000612930 RTP4Q96DX8 246 aa17.04■□□□□ 0.32
TSKU-205ENST00000612930 OR52B2Q96RD2 323 aa17.04■□□□□ 0.32
TSKU-205ENST00000612930 MOCS1Q9NZB8 636 aa17.04■□□□□ 0.32
TSKU-205ENST00000612930 TMEM216Q9P0N5 145 aa17.04■□□□□ 0.32
TSKU-205ENST00000612930 COPG2Q9UBF2 871 aa17.04■□□□□ 0.32
TSKU-205ENST00000612930 SERPINA10Q9UK55 444 aa17.04■□□□□ 0.32
TSKU-205ENST00000612930 SYNPO2Q9UMS6 1093 aa17.04■□□□□ 0.32
TSKU-205ENST00000612930 WDR81Q562E7 1941 aa17.03■□□□□ 0.32
TSKU-205ENST00000612930 STBD1O95210 358 aa17.03■□□□□ 0.32
TSKU-205ENST00000612930 MAP3K6O95382 1288 aa17.03■□□□□ 0.32
TSKU-205ENST00000612930 RALBP11234 206 aa17.03■□□□□ 0.32
TSKU-205ENST00000612930 GLDCP23378 1020 aa17.03■□□□□ 0.32
TSKU-205ENST00000612930 PIK3R1P27986 724 aa17.03■□□□□ 0.32
TSKU-205ENST00000612930 DPP6P42658 865 aa17.03■□□□□ 0.32
TSKU-205ENST00000612930 CDH6P55285 790 aa17.03■□□□□ 0.32
TSKU-205ENST00000612930 NRF1Q16656 503 aa17.03■□□□□ 0.32
TSKU-205ENST00000612930 RAB6CQ53S08 254 aa17.03■□□□□ 0.32
TSKU-205ENST00000612930 SNX32Q86XE0 403 aa17.03■□□□□ 0.32
TSKU-205ENST00000612930 ZNF781Q8N8C0 355 aa17.03■□□□□ 0.32
TSKU-205ENST00000612930 KYQ8NBH2 561 aa17.03■□□□□ 0.32
TSKU-205ENST00000612930 ACMSDQ8TDX5 336 aa17.03■□□□□ 0.32
TSKU-205ENST00000612930 MASTLQ96GX5 879 aa17.03■□□□□ 0.32
TSKU-205ENST00000612930 RAB6CQ9H0N0 254 aa17.03■□□□□ 0.32
TSKU-205ENST00000612930 VPS28Q9UK41 221 aa17.03■□□□□ 0.32
TSKU-205ENST00000612930 GPR25O00155 361 aa17.03■□□□□ 0.32
TSKU-205ENST00000612930 PPEF1O14829 653 aaPredicted RBP17.03■□□□□ 0.32
TSKU-205ENST00000612930 H6PDO95479 791 aa17.03■□□□□ 0.32
TSKU-205ENST00000612930 ASS1P00966 412 aaKnown RBP17.03■□□□□ 0.32
TSKU-205ENST00000612930 GRIA1P42261 906 aa17.03■□□□□ 0.32
TSKU-205ENST00000612930 NUMBP49757 651 aa17.03■□□□□ 0.32
TSKU-205ENST00000612930 TXNL4AP83876 142 aaKnown RBP17.03■□□□□ 0.32
TSKU-205ENST00000612930 PDAP1Q13442 181 aaKnown RBP17.03■□□□□ 0.32
TSKU-205ENST00000612930 MGAT5BQ3V5L5 792 aa17.03■□□□□ 0.32
TSKU-205ENST00000612930 C16orf89Q6UX73 402 aa17.03■□□□□ 0.32
TSKU-205ENST00000612930 USP13Q92995 863 aaPredicted RBP17.03■□□□□ 0.32
TSKU-205ENST00000612930 GCOM2Q9BZD3 368 aaPredicted RBP17.03■□□□□ 0.32
TSKU-205ENST00000612930 CYP26B1Q9NR63 512 aa17.03■□□□□ 0.32
TSKU-205ENST00000612930 H3BNH8 94 aa17.02■□□□□ 0.32
TSKU-205ENST00000612930 SERPINB7O75635 380 aa17.02■□□□□ 0.32
TSKU-205ENST00000612930 OATP04181 439 aa17.02■□□□□ 0.32
TSKU-205ENST00000612930 COL6A2P12110 1019 aa17.02■□□□□ 0.32
TSKU-205ENST00000612930 CNTFP26441 200 aa17.02■□□□□ 0.32
TSKU-205ENST00000612930 PHKA2P46019 1235 aa17.02■□□□□ 0.32
TSKU-205ENST00000612930 OXCT1P55809 520 aa17.02■□□□□ 0.32
TSKU-205ENST00000612930 PPM1JQ5JR12 505 aa17.02■□□□□ 0.32
TSKU-205ENST00000612930 ITPRIPL1Q6GPH6 555 aa17.02■□□□□ 0.32
TSKU-205ENST00000612930 CYP4V2Q6ZWL3 525 aaPredicted RBP17.02■□□□□ 0.32
TSKU-205ENST00000612930 MCUQ8NE86 351 aa17.02■□□□□ 0.32
TSKU-205ENST00000612930 CDH19Q9H159 772 aa17.02■□□□□ 0.32
TSKU-205ENST00000612930 POLR3FQ9H1D9 316 aaPredicted RBP17.02■□□□□ 0.32
TSKU-205ENST00000612930 XPNPEP3Q9NQH7 507 aa17.02■□□□□ 0.32
TSKU-205ENST00000612930 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.02■□□□□ 0.32
TSKU-205ENST00000612930 DCDC2Q9UHG0 476 aa17.02■□□□□ 0.32
TSKU-205ENST00000612930 TCEAL9Q9UHQ7 104 aa17.02■□□□□ 0.32
TSKU-205ENST00000612930 CNOT11Q9UKZ1 510 aaKnown RBP17.02■□□□□ 0.32
TSKU-205ENST00000612930 NOP56O00567 594 aaKnown RBP17.02■□□□□ 0.31
TSKU-205ENST00000612930 EIF2AK2P19525 551 aaKnown RBP17.02■□□□□ 0.31
TSKU-205ENST00000612930 RELAQ04206 551 aa17.02■□□□□ 0.31
TSKU-205ENST00000612930 SH3PXD2AQ5TCZ1 1133 aa17.02■□□□□ 0.31
TSKU-205ENST00000612930 CARM1Q86X55 608 aa17.02■□□□□ 0.31
TSKU-205ENST00000612930 CLEC4DQ8WXI8 215 aa17.02■□□□□ 0.31
TSKU-205ENST00000612930 SLC7A3Q8WY07 619 aa17.02■□□□□ 0.31
TSKU-205ENST00000612930 CAAP1Q9H8G2 361 aa17.02■□□□□ 0.31
TSKU-205ENST00000612930 ZNF358Q9NW07 568 aa17.02■□□□□ 0.31
TSKU-205ENST00000612930 CLEC11AQ9Y240 323 aa17.02■□□□□ 0.31
TSKU-205ENST00000612930 AFG3L2Q9Y4W6 797 aa17.02■□□□□ 0.31
TSKU-205ENST00000612930 PCDHB12Q9Y5F1 795 aa17.02■□□□□ 0.31
TSKU-205ENST00000612930 STX16-NPEPL1H3BU86 382 aa17.01■□□□□ 0.31
TSKU-205ENST00000612930 CFLARO15519 480 aa17.01■□□□□ 0.31
TSKU-205ENST00000612930 CBFA2T3O75081 653 aa17.01■□□□□ 0.31
TSKU-205ENST00000612930 SFNP31947 248 aa17.01■□□□□ 0.31
TSKU-205ENST00000612930 PSMD7P51665 324 aa17.01■□□□□ 0.31
TSKU-205ENST00000612930 MYL6P60660 151 aa17.01■□□□□ 0.31
TSKU-205ENST00000612930 CTBSQ01459 385 aa17.01■□□□□ 0.31
TSKU-205ENST00000612930 XYLT1Q86Y38 959 aa17.01■□□□□ 0.31
TSKU-205ENST00000612930 PLD5Q8N7P1 536 aa17.01■□□□□ 0.31
TSKU-205ENST00000612930 PDCD6IPQ8WUM4 868 aaKnown RBP17.01■□□□□ 0.31
TSKU-205ENST00000612930 CPXM1Q96SM3 734 aa17.01■□□□□ 0.31
TSKU-205ENST00000612930 OLAHQ9NV23 265 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms