RNA–Protein interactions for RNA: ENST00000612558.4

CCDC47-207, Transcript of coiled-coil domain containing 47, humanhuman

TSL 5 BASIC

Gene CCDC47, Length 1,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-207ENST00000612558 IGLV3-25P01717 112 aa9.23□□□□□ -0.93
CCDC47-207ENST00000612558 RBP3P10745 1247 aa9.23□□□□□ -0.93
CCDC47-207ENST00000612558 YWHAQP27348 245 aa9.23□□□□□ -0.93
CCDC47-207ENST00000612558 PPM1AP35813 382 aa9.23□□□□□ -0.93
CCDC47-207ENST00000612558 TUFMP49411 452 aaKnown RBP9.23□□□□□ -0.93
CCDC47-207ENST00000612558 GLUD2P49448 558 aa9.23□□□□□ -0.93
CCDC47-207ENST00000612558 ZNF135P52742 658 aaPredicted RBP9.23□□□□□ -0.93
CCDC47-207ENST00000612558 ROR1Q01973 937 aa9.23□□□□□ -0.93
CCDC47-207ENST00000612558 DSG1Q02413 1049 aa9.23□□□□□ -0.93
CCDC47-207ENST00000612558 FPGSQ05932 587 aa9.23□□□□□ -0.93
CCDC47-207ENST00000612558 EIF4EBP2Q13542 120 aaPredicted RBP9.23□□□□□ -0.93
CCDC47-207ENST00000612558 ALS2CLQ60I27 953 aa9.23□□□□□ -0.93
CCDC47-207ENST00000612558 C1orf228Q6PIY5 440 aa9.23□□□□□ -0.93
CCDC47-207ENST00000612558 NPNTQ6UXI9 565 aa9.23□□□□□ -0.93
CCDC47-207ENST00000612558 C16orf59Q7L2K0 433 aa9.23□□□□□ -0.93
CCDC47-207ENST00000612558 DDX53Q86TM3 631 aaKnown RBP9.23□□□□□ -0.93
CCDC47-207ENST00000612558 TAC4Q86UU9 113 aa9.23□□□□□ -0.93
CCDC47-207ENST00000612558 PYROXD2Q8N2H3 581 aa9.23□□□□□ -0.93
CCDC47-207ENST00000612558 DQX1Q8TE96 717 aaKnown RBP9.23□□□□□ -0.93
CCDC47-207ENST00000612558 RSAD2Q8WXG1 361 aa9.23□□□□□ -0.93
CCDC47-207ENST00000612558 SEPT5Q99719 369 aaPredicted RBP9.23□□□□□ -0.93
CCDC47-207ENST00000612558 CLSTN3Q9BQT9 956 aa9.23□□□□□ -0.93
CCDC47-207ENST00000612558 HERC2P3Q9BVR0 1158 aa9.23□□□□□ -0.93
CCDC47-207ENST00000612558 MAGEB5Q9BZ81 275 aa9.23□□□□□ -0.93
CCDC47-207ENST00000612558 TSPYL1Q9H0U9 437 aa9.23□□□□□ -0.93
CCDC47-207ENST00000612558 SMOC2Q9H3U7 446 aa9.23□□□□□ -0.93
CCDC47-207ENST00000612558 PCDH9Q9HC56 1237 aa9.23□□□□□ -0.93
CCDC47-207ENST00000612558 PRDM10Q9NQV6 1147 aa9.23□□□□□ -0.93
CCDC47-207ENST00000612558 HSFX1Q9UBD0 423 aa9.23□□□□□ -0.93
CCDC47-207ENST00000612558 STK39Q9UEW8 545 aa9.23□□□□□ -0.93
CCDC47-207ENST00000612558 AFF4Q9UHB7 1163 aaKnown RBP9.23□□□□□ -0.93
CCDC47-207ENST00000612558 ZNF638Q14966 1978 aaKnown RBP9.22□□□□□ -0.93
CCDC47-207ENST00000612558 A0A1W2PQH9 124 aa9.22□□□□□ -0.93
CCDC47-207ENST00000612558 CFAP69A5D8W1 941 aa9.22□□□□□ -0.93
CCDC47-207ENST00000612558 GOLGA6BA6NDN3 693 aa9.22□□□□□ -0.93
CCDC47-207ENST00000612558 C2CD2LO14523 706 aa9.22□□□□□ -0.93
CCDC47-207ENST00000612558 NDC80O14777 642 aa9.22□□□□□ -0.93
CCDC47-207ENST00000612558 ADAM12O43184 909 aa9.22□□□□□ -0.93
CCDC47-207ENST00000612558 IRAK2O43187 625 aa9.22□□□□□ -0.93
CCDC47-207ENST00000612558 PPFIA2O75334 1257 aa9.22□□□□□ -0.93
CCDC47-207ENST00000612558 SOAT2O75908 522 aa9.22□□□□□ -0.93
CCDC47-207ENST00000612558 ABLIM3O94929 683 aa9.22□□□□□ -0.93
CCDC47-207ENST00000612558 GJB5O95377 273 aa9.22□□□□□ -0.93
CCDC47-207ENST00000612558 IFNB1P01574 187 aa9.22□□□□□ -0.93
CCDC47-207ENST00000612558 GOT1P17174 413 aa9.22□□□□□ -0.93
CCDC47-207ENST00000612558 RPL17P18621 184 aaKnown RBP9.22□□□□□ -0.93
CCDC47-207ENST00000612558 AMPD1P23109 780 aa9.22□□□□□ -0.93
CCDC47-207ENST00000612558 HCAR3P49019 387 aa9.22□□□□□ -0.93
CCDC47-207ENST00000612558 VPS41P49754 854 aa9.22□□□□□ -0.93
CCDC47-207ENST00000612558 HTRA4P83105 476 aaPredicted RBP9.22□□□□□ -0.93
CCDC47-207ENST00000612558 DHX9Q08211 1270 aaKnown RBP9.22□□□□□ -0.93
CCDC47-207ENST00000612558 XRCC4Q13426 336 aa9.22□□□□□ -0.93
CCDC47-207ENST00000612558 MTMR3Q13615 1198 aa9.22□□□□□ -0.93
CCDC47-207ENST00000612558 SPDYCQ5MJ68 293 aa9.22□□□□□ -0.93
CCDC47-207ENST00000612558 BRMS1LQ5PSV4 323 aa9.22□□□□□ -0.93
CCDC47-207ENST00000612558 TPGS2Q68CL5 300 aa9.22□□□□□ -0.93
CCDC47-207ENST00000612558 DARS2Q6PI48 645 aaKnown RBP9.22□□□□□ -0.93
CCDC47-207ENST00000612558 BZW1Q7L1Q6 419 aaKnown RBP9.22□□□□□ -0.93
CCDC47-207ENST00000612558 TMC3Q7Z5M5 1100 aa9.22□□□□□ -0.93
CCDC47-207ENST00000612558 KRT222Q8N1A0 295 aa9.22□□□□□ -0.93
CCDC47-207ENST00000612558 TSEN2Q8NCE0 465 aaKnown RBP9.22□□□□□ -0.93
CCDC47-207ENST00000612558 ZNF461Q8TAF7 563 aa9.22□□□□□ -0.93
CCDC47-207ENST00000612558 GPR152Q8TDT2 470 aa9.22□□□□□ -0.93
CCDC47-207ENST00000612558 BADQ92934 168 aa9.22□□□□□ -0.93
CCDC47-207ENST00000612558 RNF34Q969K3 372 aa9.22□□□□□ -0.93
CCDC47-207ENST00000612558 TKTL2Q9H0I9 626 aa9.22□□□□□ -0.93
CCDC47-207ENST00000612558 CRISPLD1Q9H336 500 aa9.22□□□□□ -0.93
CCDC47-207ENST00000612558 NMUR1Q9HB89 426 aa9.22□□□□□ -0.93
CCDC47-207ENST00000612558 TLR8Q9NR97 1041 aaKnown RBP9.22□□□□□ -0.93
CCDC47-207ENST00000612558 TMPRSS4Q9NRS4 437 aa9.22□□□□□ -0.93
CCDC47-207ENST00000612558 EVA1BQ9NVM1 165 aa9.22□□□□□ -0.93
CCDC47-207ENST00000612558 ARHGEF38Q9NXL2 777 aa9.22□□□□□ -0.93
CCDC47-207ENST00000612558 CLIC5Q9NZA1 410 aa9.22□□□□□ -0.93
CCDC47-207ENST00000612558 ANAPC5Q9UJX4 755 aa9.22□□□□□ -0.93
CCDC47-207ENST00000612558 PCDHB12Q9Y5F1 795 aa9.22□□□□□ -0.93
CCDC47-207ENST00000612558 HEY1Q9Y5J3 304 aa9.22□□□□□ -0.93
CCDC47-207ENST00000612558 PLXNA3P51805 1871 aa9.21□□□□□ -0.93
CCDC47-207ENST00000612558 H7C0C1 242 aa9.21□□□□□ -0.93
CCDC47-207ENST00000612558 EEF2KO00418 725 aaKnown RBP9.21□□□□□ -0.93
CCDC47-207ENST00000612558 TP73O15350 636 aa9.21□□□□□ -0.93
CCDC47-207ENST00000612558 CREB3O43889 395 aa9.21□□□□□ -0.93
CCDC47-207ENST00000612558 URODP06132 367 aa9.21□□□□□ -0.93
CCDC47-207ENST00000612558 ZSCAN5DPP0CG00 497 aa9.21□□□□□ -0.93
CCDC47-207ENST00000612558 CCR1P32246 355 aa9.21□□□□□ -0.93
CCDC47-207ENST00000612558 ATP5OP48047 213 aa9.21□□□□□ -0.93
CCDC47-207ENST00000612558 PGFP49763 221 aa9.21□□□□□ -0.93
CCDC47-207ENST00000612558 ITGA8P53708 1063 aa9.21□□□□□ -0.93
CCDC47-207ENST00000612558 GDF10P55107 478 aa9.21□□□□□ -0.93
CCDC47-207ENST00000612558 TAF10Q12962 218 aa9.21□□□□□ -0.93
CCDC47-207ENST00000612558 GPS1Q13098 491 aa9.21□□□□□ -0.93
CCDC47-207ENST00000612558 SEMA3BQ13214 749 aa9.21□□□□□ -0.93
CCDC47-207ENST00000612558 DPYSQ14117 519 aa9.21□□□□□ -0.93
CCDC47-207ENST00000612558 PPP2R5DQ14738 602 aa9.21□□□□□ -0.93
CCDC47-207ENST00000612558 SLMAPQ14BN4 828 aa9.21□□□□□ -0.93
CCDC47-207ENST00000612558 P3H1Q32P28 736 aa9.21□□□□□ -0.93
CCDC47-207ENST00000612558 CFAP58Q5T655 872 aa9.21□□□□□ -0.93
CCDC47-207ENST00000612558 IZUMO3Q5VZ72 239 aa9.21□□□□□ -0.93
CCDC47-207ENST00000612558 NCBP2-AS2Q69YL0 99 aa9.21□□□□□ -0.93
CCDC47-207ENST00000612558 MSANTD2Q6P1R3 559 aa9.21□□□□□ -0.93
CCDC47-207ENST00000612558 PSRC1Q6PGN9 363 aaPredicted RBP9.21□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms