RNA–Protein interactions for RNA: ENST00000612337.4

SSBP1-215, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SSBP1, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-215ENST00000612337 TMEM8BA6NDV4 472 aa18.52■□□□□ 0.56
SSBP1-215ENST00000612337 H0Y626 953 aa18.52■□□□□ 0.56
SSBP1-215ENST00000612337 P4HA2O15460 535 aa18.52■□□□□ 0.56
SSBP1-215ENST00000612337 MSI1O43347 362 aaKnown RBP18.52■□□□□ 0.56
SSBP1-215ENST00000612337 HYAL3O43820 417 aaPredicted RBP18.52■□□□□ 0.56
SSBP1-215ENST00000612337 TRIM16O95361 564 aa18.52■□□□□ 0.56
SSBP1-215ENST00000612337 PPP1R2P41236 205 aa18.52■□□□□ 0.56
SSBP1-215ENST00000612337 NUCB2P80303 420 aa18.52■□□□□ 0.56
SSBP1-215ENST00000612337 GRIK2Q13002 908 aa18.52■□□□□ 0.56
SSBP1-215ENST00000612337 CAMK2GQ13555 558 aaPredicted RBP18.52■□□□□ 0.56
SSBP1-215ENST00000612337 STILQ15468 1287 aa18.52■□□□□ 0.56
SSBP1-215ENST00000612337 CNGA2Q16280 664 aa18.52■□□□□ 0.56
SSBP1-215ENST00000612337 PMF1Q6P1K2 205 aa18.52■□□□□ 0.56
SSBP1-215ENST00000612337 KIAA0907Q7Z7F0 614 aaPredicted RBP18.52■□□□□ 0.56
SSBP1-215ENST00000612337 ELOA2Q8IYF1 753 aaPredicted RBP18.52■□□□□ 0.56
SSBP1-215ENST00000612337 PPM1KQ8N3J5 372 aa18.52■□□□□ 0.56
SSBP1-215ENST00000612337 OR2T3Q8NH03 318 aa18.52■□□□□ 0.56
SSBP1-215ENST00000612337 IRX2Q9BZI1 471 aaPredicted RBP18.52■□□□□ 0.56
SSBP1-215ENST00000612337 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.52■□□□□ 0.56
SSBP1-215ENST00000612337 PLA2G4CQ9UP65 541 aa18.52■□□□□ 0.56
SSBP1-215ENST00000612337 NEUROG3Q9Y4Z2 214 aa18.52■□□□□ 0.56
SSBP1-215ENST00000612337 FAM208BQ5VWN6 2430 aa18.52■□□□□ 0.55
SSBP1-215ENST00000612337 LAMA5O15230 3695 aa18.51■□□□□ 0.55
SSBP1-215ENST00000612337 MUC22E2RYF6 1773 aaPredicted RBP18.51■□□□□ 0.55
SSBP1-215ENST00000612337 METTL12A8MUP2 240 aa18.51■□□□□ 0.55
SSBP1-215ENST00000612337 M0QYV0 167 aa18.51■□□□□ 0.55
SSBP1-215ENST00000612337 RNF225M0QZC1 329 aaPredicted RBP18.51■□□□□ 0.55
SSBP1-215ENST00000612337 GABBR2O75899 941 aa18.51■□□□□ 0.55
SSBP1-215ENST00000612337 IGLV3-27P01718 113 aa18.51■□□□□ 0.55
SSBP1-215ENST00000612337 C7P10643 843 aa18.51■□□□□ 0.55
SSBP1-215ENST00000612337 HLA-EP13747 358 aa18.51■□□□□ 0.55
SSBP1-215ENST00000612337 CD44P16070 742 aaKnown RBP18.51■□□□□ 0.55
SSBP1-215ENST00000612337 RDXP35241 583 aaKnown RBP18.51■□□□□ 0.55
SSBP1-215ENST00000612337 RGS7P49802 495 aa18.51■□□□□ 0.55
SSBP1-215ENST00000612337 FAM193AP78312 1265 aa18.51■□□□□ 0.55
SSBP1-215ENST00000612337 CETN1Q12798 172 aa18.51■□□□□ 0.55
SSBP1-215ENST00000612337 CCDC40Q4G0X9 1142 aa18.51■□□□□ 0.55
SSBP1-215ENST00000612337 DCAF12L1Q5VU92 463 aa18.51■□□□□ 0.55
SSBP1-215ENST00000612337 CHST9Q7L1S5 443 aa18.51■□□□□ 0.55
SSBP1-215ENST00000612337 ADIPOR2Q86V24 386 aa18.51■□□□□ 0.55
SSBP1-215ENST00000612337 CACUL1Q86Y37 369 aa18.51■□□□□ 0.55
SSBP1-215ENST00000612337 UNC45BQ8IWX7 931 aa18.51■□□□□ 0.55
SSBP1-215ENST00000612337 AHI1Q8N157 1196 aa18.51■□□□□ 0.55
SSBP1-215ENST00000612337 ZCCHC9Q8N567 271 aaKnown RBP18.51■□□□□ 0.55
SSBP1-215ENST00000612337 LMO3Q8TAP4 145 aa18.51■□□□□ 0.55
SSBP1-215ENST00000612337 KAT5Q92993 513 aa18.51■□□□□ 0.55
SSBP1-215ENST00000612337 HSFY1Q96LI6 401 aa18.51■□□□□ 0.55
SSBP1-215ENST00000612337 ZSWIM1Q9BR11 485 aa18.51■□□□□ 0.55
SSBP1-215ENST00000612337 TMEM245Q9H330 911 aa18.51■□□□□ 0.55
SSBP1-215ENST00000612337 ABCB8Q9NUT2 735 aa18.51■□□□□ 0.55
SSBP1-215ENST00000612337 GGA2Q9UJY4 613 aa18.51■□□□□ 0.55
SSBP1-215ENST00000612337 MAN1B1Q9UKM7 699 aa18.51■□□□□ 0.55
SSBP1-215ENST00000612337 ZMIZ1Q9ULJ6 1067 aa18.51■□□□□ 0.55
SSBP1-215ENST00000612337 PIK3R2O00459 728 aa18.5■□□□□ 0.55
SSBP1-215ENST00000612337 FBXO21O94952 628 aa18.5■□□□□ 0.55
SSBP1-215ENST00000612337 PABPC1P11940 636 aaKnown RBP18.5■□□□□ 0.55
SSBP1-215ENST00000612337 BRD2P25440 801 aaKnown RBP18.5■□□□□ 0.55
SSBP1-215ENST00000612337 SGSHP51688 502 aa18.5■□□□□ 0.55
SSBP1-215ENST00000612337 RING1Q06587 406 aa18.5■□□□□ 0.55
SSBP1-215ENST00000612337 PTPRNQ16849 979 aa18.5■□□□□ 0.55
SSBP1-215ENST00000612337 FNDC3BQ53EP0 1204 aaKnown RBP18.5■□□□□ 0.55
SSBP1-215ENST00000612337 MPP7Q5T2T1 576 aa18.5■□□□□ 0.55
SSBP1-215ENST00000612337 NUGGCQ68CJ6 796 aa18.5■□□□□ 0.55
SSBP1-215ENST00000612337 ISM2Q6H9L7 571 aa18.5■□□□□ 0.55
SSBP1-215ENST00000612337 TTI2Q6NXR4 508 aa18.5■□□□□ 0.55
SSBP1-215ENST00000612337 FOXR2Q6PJQ5 311 aa18.5■□□□□ 0.55
SSBP1-215ENST00000612337 CYB5D2Q8WUJ1 264 aa18.5■□□□□ 0.55
SSBP1-215ENST00000612337 AZIN2Q96A70 460 aa18.5■□□□□ 0.55
SSBP1-215ENST00000612337 MIR1-1HGQ9H1L0 117 aa18.5■□□□□ 0.55
SSBP1-215ENST00000612337 PCED1AQ9H1Q7 454 aa18.5■□□□□ 0.55
SSBP1-215ENST00000612337 MSRB2Q9Y3D2 182 aa18.5■□□□□ 0.55
SSBP1-215ENST00000612337 NUMA1Q14980 2115 aa18.49■□□□□ 0.55
SSBP1-215ENST00000612337 KNL1Q8NG31 2342 aa18.49■□□□□ 0.55
SSBP1-215ENST00000612337 BCAT2O15382 392 aaPredicted RBP18.49■□□□□ 0.55
SSBP1-215ENST00000612337 IRAK2O43187 625 aa18.49■□□□□ 0.55
SSBP1-215ENST00000612337 SH3BP5O60239 455 aa18.49■□□□□ 0.55
SSBP1-215ENST00000612337 LTFP02788 710 aa18.49■□□□□ 0.55
SSBP1-215ENST00000612337 SLC11A2P49281 568 aa18.49■□□□□ 0.55
SSBP1-215ENST00000612337 GCNT1Q02742 428 aa18.49■□□□□ 0.55
SSBP1-215ENST00000612337 BECN1Q14457 450 aa18.49■□□□□ 0.55
SSBP1-215ENST00000612337 ZNF423Q2M1K9 1284 aa18.49■□□□□ 0.55
SSBP1-215ENST00000612337 FAM133BQ5BKY9 247 aaKnown RBP18.49■□□□□ 0.55
SSBP1-215ENST00000612337 PIK3R6Q5UE93 754 aa18.49■□□□□ 0.55
SSBP1-215ENST00000612337 MBLAC2Q68D91 279 aa18.49■□□□□ 0.55
SSBP1-215ENST00000612337 KLHL10Q6JEL2 608 aa18.49■□□□□ 0.55
SSBP1-215ENST00000612337 RFWD3Q6PCD5 774 aa18.49■□□□□ 0.55
SSBP1-215ENST00000612337 ZNF557Q8N988 423 aaPredicted RBP18.49■□□□□ 0.55
SSBP1-215ENST00000612337 GOLGA1Q92805 767 aa18.49■□□□□ 0.55
SSBP1-215ENST00000612337 CAMK1GQ96NX5 476 aa18.49■□□□□ 0.55
SSBP1-215ENST00000612337 LHX5Q9H2C1 402 aa18.49■□□□□ 0.55
SSBP1-215ENST00000612337 FBRSQ9HAH7 460 aa18.49■□□□□ 0.55
SSBP1-215ENST00000612337 KLK13Q9UKR3 277 aa18.49■□□□□ 0.55
SSBP1-215ENST00000612337 DSPP15924 2871 aaKnown RBP18.48■□□□□ 0.55
SSBP1-215ENST00000612337 PPP1R3GB7ZBB8 358 aa18.48■□□□□ 0.55
SSBP1-215ENST00000612337 ACSL4O60488 711 aa18.48■□□□□ 0.55
SSBP1-215ENST00000612337 TBL1XO60907 577 aa18.48■□□□□ 0.55
SSBP1-215ENST00000612337 ATP5BP06576 529 aaKnown RBP18.48■□□□□ 0.55
SSBP1-215ENST00000612337 DLDP09622 509 aaKnown RBP18.48■□□□□ 0.55
SSBP1-215ENST00000612337 TBX4P57082 545 aa18.48■□□□□ 0.55
SSBP1-215ENST00000612337 TRIP6Q15654 476 aaKnown RBP18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms