RNA–Protein interactions for RNA: ENST00000612273.1

COL6A1-207, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL6A1, Length 3,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-207ENST00000612273 IRGCQ6NXR0 463 aa14.47□□□□□ -0.09
COL6A1-207ENST00000612273 SPATA6LQ8N4H0 392 aa14.47□□□□□ -0.09
COL6A1-207ENST00000612273 PIWIL2Q8TC59 973 aaKnown RBP14.47□□□□□ -0.09
COL6A1-207ENST00000612273 PPP4R1Q8TF05 950 aa14.47□□□□□ -0.09
COL6A1-207ENST00000612273 AFG1LQ8WV93 481 aa14.47□□□□□ -0.09
COL6A1-207ENST00000612273 KHSRPQ92945 711 aaKnown RBP eCLIP14.47□□□□□ -0.09
COL6A1-207ENST00000612273 CSPG4P5Q96PW8 444 aa14.47□□□□□ -0.09
COL6A1-207ENST00000612273 KCTD15Q96SI1 283 aaPredicted RBP14.47□□□□□ -0.09
COL6A1-207ENST00000612273 FRMD8P1Q9BZ68 369 aaPredicted RBP14.47□□□□□ -0.09
COL6A1-207ENST00000612273 ANGPTL2Q9UKU9 493 aa14.47□□□□□ -0.09
COL6A1-207ENST00000612273 COL11A1P12107 1806 aaPredicted RBP14.47□□□□□ -0.09
COL6A1-207ENST00000612273 CLDN5O00501 218 aa14.47□□□□□ -0.09
COL6A1-207ENST00000612273 MFSD11O43934 449 aa14.47□□□□□ -0.09
COL6A1-207ENST00000612273 TCN1P20061 433 aaPredicted RBP14.47□□□□□ -0.09
COL6A1-207ENST00000612273 L1CAMP32004 1257 aa14.47□□□□□ -0.09
COL6A1-207ENST00000612273 PAPOLAP51003 745 aaKnown RBP14.47□□□□□ -0.09
COL6A1-207ENST00000612273 BIRC2Q13490 618 aa14.47□□□□□ -0.09
COL6A1-207ENST00000612273 STILQ15468 1287 aa14.47□□□□□ -0.09
COL6A1-207ENST00000612273 TRIP10Q15642 601 aa14.47□□□□□ -0.09
COL6A1-207ENST00000612273 LCLAT1Q6UWP7 414 aa14.47□□□□□ -0.09
COL6A1-207ENST00000612273 C7orf26Q96N11 449 aa14.47□□□□□ -0.09
COL6A1-207ENST00000612273 AGAP2Q99490 1192 aa14.47□□□□□ -0.09
COL6A1-207ENST00000612273 WDR55Q9H6Y2 383 aaPredicted RBP14.47□□□□□ -0.09
COL6A1-207ENST00000612273 THAP1Q9NVV9 213 aa14.47□□□□□ -0.09
COL6A1-207ENST00000612273 CSADQ9Y600 493 aa14.47□□□□□ -0.09
COL6A1-207ENST00000612273 RNF103O00237 685 aa14.46□□□□□ -0.09
COL6A1-207ENST00000612273 USP2O75604 605 aaPredicted RBP14.46□□□□□ -0.09
COL6A1-207ENST00000612273 PRKCHP24723 683 aa14.46□□□□□ -0.09
COL6A1-207ENST00000612273 SARNPP82979 210 aaKnown RBP14.46□□□□□ -0.09
COL6A1-207ENST00000612273 SPDYAQ5MJ70 313 aa14.46□□□□□ -0.09
COL6A1-207ENST00000612273 CDKL3Q8IVW4 592 aaPredicted RBP14.46□□□□□ -0.09
COL6A1-207ENST00000612273 PLD6Q8N2A8 252 aaKnown RBP14.46□□□□□ -0.09
COL6A1-207ENST00000612273 OR52K1Q8NGK4 314 aa14.46□□□□□ -0.09
COL6A1-207ENST00000612273 HTR3CQ8WXA8 447 aa14.46□□□□□ -0.09
COL6A1-207ENST00000612273 C12orf42Q96LP6 360 aa14.46□□□□□ -0.09
COL6A1-207ENST00000612273 FGD4Q96M96 766 aa14.46□□□□□ -0.09
COL6A1-207ENST00000612273 SMARCAD1Q9H4L7 1026 aa14.46□□□□□ -0.09
COL6A1-207ENST00000612273 PRMT7Q9NVM4 692 aaPredicted RBP14.46□□□□□ -0.09
COL6A1-207ENST00000612273 SOX13Q9UN79 622 aa14.46□□□□□ -0.09
COL6A1-207ENST00000612273 A0A1B0GVG6 124 aa14.46□□□□□ -0.09
COL6A1-207ENST00000612273 SIN3BO75182 1162 aa14.46□□□□□ -0.09
COL6A1-207ENST00000612273 ENDOD1O94919 500 aa14.46□□□□□ -0.09
COL6A1-207ENST00000612273 AVPR1AP37288 418 aa14.46□□□□□ -0.09
COL6A1-207ENST00000612273 NDUFV1P49821 464 aa14.46□□□□□ -0.09
COL6A1-207ENST00000612273 GRM1Q13255 1194 aa14.46□□□□□ -0.09
COL6A1-207ENST00000612273 PDK2Q15119 407 aa14.46□□□□□ -0.09
COL6A1-207ENST00000612273 TEDDM1Q5T9Z0 273 aa14.46□□□□□ -0.09
COL6A1-207ENST00000612273 NXNQ6DKJ4 435 aa14.46□□□□□ -0.09
COL6A1-207ENST00000612273 PACS1Q6VY07 963 aa14.46□□□□□ -0.09
COL6A1-207ENST00000612273 TRIM42Q8IWZ5 723 aa14.46□□□□□ -0.09
COL6A1-207ENST00000612273 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.46□□□□□ -0.09
COL6A1-207ENST00000612273 ATP2A3Q93084 1043 aa14.46□□□□□ -0.09
COL6A1-207ENST00000612273 CCDC106Q9BWC9 280 aa14.46□□□□□ -0.09
COL6A1-207ENST00000612273 ZNF112Q9UJU3 913 aa14.46□□□□□ -0.09
COL6A1-207ENST00000612273 EMCNQ9ULC0 261 aa14.46□□□□□ -0.09
COL6A1-207ENST00000612273 TRIP11Q15643 1979 aa14.46□□□□□ -0.1
COL6A1-207ENST00000612273 AMHP03971 560 aa14.46□□□□□ -0.1
COL6A1-207ENST00000612273 DESP17661 470 aa14.46□□□□□ -0.1
COL6A1-207ENST00000612273 PEX2P28328 305 aa14.46□□□□□ -0.1
COL6A1-207ENST00000612273 ARL4AP40617 200 aa14.46□□□□□ -0.1
COL6A1-207ENST00000612273 IRX1P78414 480 aaPredicted RBP14.46□□□□□ -0.1
COL6A1-207ENST00000612273 IRF9Q00978 393 aa14.46□□□□□ -0.1
COL6A1-207ENST00000612273 DSG1Q02413 1049 aa14.46□□□□□ -0.1
COL6A1-207ENST00000612273 CDC16Q13042 620 aa14.46□□□□□ -0.1
COL6A1-207ENST00000612273 OR52E8Q6IFG1 317 aa14.46□□□□□ -0.1
COL6A1-207ENST00000612273 SLC2A14Q8TDB8 520 aa14.46□□□□□ -0.1
COL6A1-207ENST00000612273 ZNF669Q96BR6 464 aaPredicted RBP14.46□□□□□ -0.1
COL6A1-207ENST00000612273 CAMKK2Q96RR4 588 aa14.46□□□□□ -0.1
COL6A1-207ENST00000612273 WDR81Q562E7 1941 aa14.45□□□□□ -0.1
COL6A1-207ENST00000612273 HBP1O60381 514 aa14.45□□□□□ -0.1
COL6A1-207ENST00000612273 CRHR1P34998 444 aa14.45□□□□□ -0.1
COL6A1-207ENST00000612273 GABRB2P47870 512 aa14.45□□□□□ -0.1
COL6A1-207ENST00000612273 COPAP53621 1224 aa14.45□□□□□ -0.1
COL6A1-207ENST00000612273 HSP90AA5PQ58FG0 334 aa14.45□□□□□ -0.1
COL6A1-207ENST00000612273 FAM219BQ5XKK7 198 aa14.45□□□□□ -0.1
COL6A1-207ENST00000612273 RIOX2Q8IUF8 465 aa14.45□□□□□ -0.1
COL6A1-207ENST00000612273 PNPLA1Q8N8W4 532 aa14.45□□□□□ -0.1
COL6A1-207ENST00000612273 TFB1MQ8WVM0 346 aaKnown RBP14.45□□□□□ -0.1
COL6A1-207ENST00000612273 CDKL2Q92772 493 aa14.45□□□□□ -0.1
COL6A1-207ENST00000612273 EIF2AQ9BY44 585 aaKnown RBP14.45□□□□□ -0.1
COL6A1-207ENST00000612273 TRIM4Q9C037 500 aa14.45□□□□□ -0.1
COL6A1-207ENST00000612273 PCDHA11Q9Y5I1 949 aa14.45□□□□□ -0.1
COL6A1-207ENST00000612273 A0A088AWK7 358 aa14.45□□□□□ -0.1
COL6A1-207ENST00000612273 SOCS7O14512 581 aa14.45□□□□□ -0.1
COL6A1-207ENST00000612273 RNASEH1O60930 286 aaKnown RBP14.45□□□□□ -0.1
COL6A1-207ENST00000612273 C22orf31O95567 290 aa14.45□□□□□ -0.1
COL6A1-207ENST00000612273 HSPA4LO95757 839 aa14.45□□□□□ -0.1
COL6A1-207ENST00000612273 LYNP07948 512 aa14.45□□□□□ -0.1
COL6A1-207ENST00000612273 ITGA2BP08514 1039 aa14.45□□□□□ -0.1
COL6A1-207ENST00000612273 TGFB3P10600 412 aa14.45□□□□□ -0.1
COL6A1-207ENST00000612273 CYP2C8P10632 490 aa14.45□□□□□ -0.1
COL6A1-207ENST00000612273 TGM2P21980 687 aa14.45□□□□□ -0.1
COL6A1-207ENST00000612273 ACTR3P61158 418 aa14.45□□□□□ -0.1
COL6A1-207ENST00000612273 MAVSQ7Z434 540 aa14.45□□□□□ -0.1
COL6A1-207ENST00000612273 DEFB106AQ8N104 65 aa14.45□□□□□ -0.1
COL6A1-207ENST00000612273 ACVR1CQ8NER5 493 aa14.45□□□□□ -0.1
COL6A1-207ENST00000612273 P2RY11Q96G91 374 aa14.45□□□□□ -0.1
COL6A1-207ENST00000612273 ECSITQ9BQ95 431 aa14.45□□□□□ -0.1
COL6A1-207ENST00000612273 PRDM12Q9H4Q4 367 aa14.45□□□□□ -0.1
COL6A1-207ENST00000612273 KLHL8Q9P2G9 620 aaPredicted RBP14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms