RNA–Protein interactions for RNA: ENST00000611712.4

LIG4-204, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LIG4, Length 4,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-204ENST00000611712 SDCBP2Q9H190 292 aa8.92□□□□□ -0.98
LIG4-204ENST00000611712 UPF3AQ9H1J1 476 aaKnown RBP8.92□□□□□ -0.98
LIG4-204ENST00000611712 DDX43Q9NXZ2 648 aaKnown RBP8.92□□□□□ -0.98
LIG4-204ENST00000611712 RREB1Q92766 1687 aa8.92□□□□□ -0.98
LIG4-204ENST00000611712 CASQ2O14958 399 aaPredicted RBP8.92□□□□□ -0.98
LIG4-204ENST00000611712 DCXO43602 365 aa8.92□□□□□ -0.98
LIG4-204ENST00000611712 ATG7O95352 703 aa8.92□□□□□ -0.98
LIG4-204ENST00000611712 ZBTB48P10074 688 aaPredicted RBP8.92□□□□□ -0.98
LIG4-204ENST00000611712 PTPN7P35236 360 aa8.92□□□□□ -0.98
LIG4-204ENST00000611712 GRIK1P39086 918 aa8.92□□□□□ -0.98
LIG4-204ENST00000611712 WDTC1Q8N5D0 677 aa8.92□□□□□ -0.98
LIG4-204ENST00000611712 HSFY1Q96LI6 401 aa8.92□□□□□ -0.98
LIG4-204ENST00000611712 SUDS3Q9H7L9 328 aaPredicted RBP8.92□□□□□ -0.98
LIG4-204ENST00000611712 ARHGEF38Q9NXL2 777 aa8.92□□□□□ -0.98
LIG4-204ENST00000611712 CDYLQ9Y232 598 aa8.92□□□□□ -0.98
LIG4-204ENST00000611712 LYPLA1O75608 230 aaPredicted RBP8.91□□□□□ -0.98
LIG4-204ENST00000611712 B3GAT3O94766 335 aa8.91□□□□□ -0.98
LIG4-204ENST00000611712 F9P00740 461 aa8.91□□□□□ -0.98
LIG4-204ENST00000611712 PROCP04070 461 aa8.91□□□□□ -0.98
LIG4-204ENST00000611712 GRM5P41594 1212 aa8.91□□□□□ -0.98
LIG4-204ENST00000611712 ZNF132P52740 706 aa8.91□□□□□ -0.98
LIG4-204ENST00000611712 CLDN10P78369 228 aa8.91□□□□□ -0.98
LIG4-204ENST00000611712 SLC25A3Q00325 362 aa8.91□□□□□ -0.98
LIG4-204ENST00000611712 TARBP2Q15633 366 aaKnown RBP8.91□□□□□ -0.98
LIG4-204ENST00000611712 CA9Q16790 459 aa8.91□□□□□ -0.98
LIG4-204ENST00000611712 WLSQ5T9L3 541 aa8.91□□□□□ -0.98
LIG4-204ENST00000611712 ABI1Q8IZP0 508 aa8.91□□□□□ -0.98
LIG4-204ENST00000611712 DCAKDQ8WVC6 231 aa8.91□□□□□ -0.98
LIG4-204ENST00000611712 PABPC5Q96DU9 382 aaKnown RBP8.91□□□□□ -0.98
LIG4-204ENST00000611712 CSPG4P5Q96PW8 444 aa8.91□□□□□ -0.98
LIG4-204ENST00000611712 UNKQ9C0B0 810 aaKnown RBP8.91□□□□□ -0.98
LIG4-204ENST00000611712 TRPV6Q9H1D0 765 aa8.91□□□□□ -0.98
LIG4-204ENST00000611712 SP110Q9HB58 689 aa8.91□□□□□ -0.98
LIG4-204ENST00000611712 NSMCE4AQ9NXX6 385 aa8.91□□□□□ -0.98
LIG4-204ENST00000611712 TUBGCP4Q9UGJ1 667 aa8.91□□□□□ -0.98
LIG4-204ENST00000611712 FETUBQ9UGM5 382 aa8.91□□□□□ -0.98
LIG4-204ENST00000611712 RUVBL2Q9Y230 463 aaKnown RBP8.91□□□□□ -0.98
LIG4-204ENST00000611712 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.91□□□□□ -0.98
LIG4-204ENST00000611712 BCLAF3A2AJT9 711 aaKnown RBP8.91□□□□□ -0.98
LIG4-204ENST00000611712 PDHXO00330 501 aa8.91□□□□□ -0.98
LIG4-204ENST00000611712 FKBP6O75344 327 aa8.91□□□□□ -0.98
LIG4-204ENST00000611712 SLC18A1P54219 525 aa8.91□□□□□ -0.98
LIG4-204ENST00000611712 UBAP2LQ14157 1087 aaKnown RBP8.91□□□□□ -0.98
LIG4-204ENST00000611712 NBPF20Q3BBV1 942 aa8.91□□□□□ -0.98
LIG4-204ENST00000611712 GRTP1Q5TC63 336 aa8.91□□□□□ -0.98
LIG4-204ENST00000611712 TRMT10BQ6PF06 316 aaKnown RBP8.91□□□□□ -0.98
LIG4-204ENST00000611712 C16orf89Q6UX73 402 aa8.91□□□□□ -0.98
LIG4-204ENST00000611712 C4orf50Q6ZRC1 276 aa8.91□□□□□ -0.98
LIG4-204ENST00000611712 LINC00523Q86TU6 105 aa8.91□□□□□ -0.98
LIG4-204ENST00000611712 TTC7BQ86TV6 843 aa8.91□□□□□ -0.98
LIG4-204ENST00000611712 PARK7Q99497 189 aaKnown RBP8.91□□□□□ -0.98
LIG4-204ENST00000611712 TRIM62Q9BVG3 475 aa8.91□□□□□ -0.98
LIG4-204ENST00000611712 ULBP1Q9BZM6 244 aa8.91□□□□□ -0.98
LIG4-204ENST00000611712 SIX4Q9UIU6 781 aa8.91□□□□□ -0.98
LIG4-204ENST00000611712 DLEC1Q9Y238 1755 aa8.91□□□□□ -0.98
LIG4-204ENST00000611712 PRR5-ARHGAP8B1AHC4 643 aa8.91□□□□□ -0.98
LIG4-204ENST00000611712 TRIM13O60858 407 aa8.91□□□□□ -0.98
LIG4-204ENST00000611712 APOA4P06727 396 aa8.91□□□□□ -0.98
LIG4-204ENST00000611712 BPGMP07738 259 aa8.91□□□□□ -0.98
LIG4-204ENST00000611712 HSPA8P11142 646 aaKnown RBP8.91□□□□□ -0.98
LIG4-204ENST00000611712 YY1P25490 414 aa8.91□□□□□ -0.98
LIG4-204ENST00000611712 NOS2P35228 1153 aa8.91□□□□□ -0.98
LIG4-204ENST00000611712 ARHGAP8P85298 464 aa8.91□□□□□ -0.98
LIG4-204ENST00000611712 GHRHRQ02643 423 aa8.91□□□□□ -0.98
LIG4-204ENST00000611712 MAP3K10Q02779 954 aa8.91□□□□□ -0.98
LIG4-204ENST00000611712 ZNF252P-AS1Q0IIN9 211 aa8.91□□□□□ -0.98
LIG4-204ENST00000611712 SEL1L3Q68CR1 1132 aa8.91□□□□□ -0.98
LIG4-204ENST00000611712 ILDR2Q71H61 639 aa8.91□□□□□ -0.98
LIG4-204ENST00000611712 TDRD5Q8NAT2 981 aaKnown RBP8.91□□□□□ -0.98
LIG4-204ENST00000611712 TMEM174Q8WUU8 243 aa8.91□□□□□ -0.98
LIG4-204ENST00000611712 NDRG1Q92597 394 aaKnown RBP8.91□□□□□ -0.98
LIG4-204ENST00000611712 WNT8BQ93098 351 aa8.91□□□□□ -0.98
LIG4-204ENST00000611712 CPNE1Q99829 537 aa8.91□□□□□ -0.98
LIG4-204ENST00000611712 SYT15Q9BQS2 421 aa8.91□□□□□ -0.98
LIG4-204ENST00000611712 MAGEB5Q9BZ81 275 aa8.91□□□□□ -0.98
LIG4-204ENST00000611712 MAF1Q9H063 256 aa8.91□□□□□ -0.98
LIG4-204ENST00000611712 XYLT2Q9H1B5 865 aa8.91□□□□□ -0.98
LIG4-204ENST00000611712 ABHD16BQ9H3Z7 469 aa8.91□□□□□ -0.98
LIG4-204ENST00000611712 NXF3Q9H4D5 531 aaKnown RBP8.91□□□□□ -0.98
LIG4-204ENST00000611712 RPL26L1Q9UNX3 145 aaKnown RBP8.91□□□□□ -0.98
LIG4-204ENST00000611712 DCAF8L1A6NGE4 600 aa8.91□□□□□ -0.98
LIG4-204ENST00000611712 PFDN6O15212 129 aa8.91□□□□□ -0.98
LIG4-204ENST00000611712 PAPSS1O43252 624 aaPredicted RBP8.91□□□□□ -0.98
LIG4-204ENST00000611712 STRNO43815 780 aa8.91□□□□□ -0.98
LIG4-204ENST00000611712 FBXO21O94952 628 aa8.91□□□□□ -0.98
LIG4-204ENST00000611712 ITGA2BP08514 1039 aa8.91□□□□□ -0.98
LIG4-204ENST00000611712 THRAP10827 490 aa8.91□□□□□ -0.98
LIG4-204ENST00000611712 ATXN1P54253 815 aaKnown RBP8.91□□□□□ -0.98
LIG4-204ENST00000611712 CACNA2D1P54289 1103 aa8.91□□□□□ -0.98
LIG4-204ENST00000611712 TBL3Q12788 808 aaKnown RBP8.91□□□□□ -0.98
LIG4-204ENST00000611712 FLOT2Q14254 428 aa8.91□□□□□ -0.98
LIG4-204ENST00000611712 SPANXN3Q5MJ09 141 aa8.91□□□□□ -0.98
LIG4-204ENST00000611712 TCHHL1Q5QJ38 904 aaPredicted RBP8.91□□□□□ -0.98
LIG4-204ENST00000611712 MAP1SQ66K74 1059 aaPredicted RBP8.91□□□□□ -0.98
LIG4-204ENST00000611712 PACS1Q6VY07 963 aa8.91□□□□□ -0.98
LIG4-204ENST00000611712 ARCQ7LC44 396 aa8.91□□□□□ -0.98
LIG4-204ENST00000611712 PLEKHH3Q7Z736 793 aa8.91□□□□□ -0.98
LIG4-204ENST00000611712 KCNMB4Q86W47 210 aa8.91□□□□□ -0.98
LIG4-204ENST00000611712 SPATA2LQ8IUW3 424 aaPredicted RBP8.91□□□□□ -0.98
LIG4-204ENST00000611712 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms