RNA–Protein interactions for RNA: ENST00000611598.1

PCDHGB1-202, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGB1, Length 2,592 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-202ENST00000611598 CHN2P52757 468 aa15.56■□□□□ 0.08
PCDHGB1-202ENST00000611598 CXCL9Q07325 125 aa15.56■□□□□ 0.08
PCDHGB1-202ENST00000611598 NIPAL4Q0D2K0 466 aa15.56■□□□□ 0.08
PCDHGB1-202ENST00000611598 ITGA9Q13797 1035 aa15.56■□□□□ 0.08
PCDHGB1-202ENST00000611598 TLR1Q15399 786 aa15.56■□□□□ 0.08
PCDHGB1-202ENST00000611598 TPSAB1Q15661 275 aa15.56■□□□□ 0.08
PCDHGB1-202ENST00000611598 BOLA3Q53S33 107 aa15.56■□□□□ 0.08
PCDHGB1-202ENST00000611598 JADE1Q6IE81 842 aa15.56■□□□□ 0.08
PCDHGB1-202ENST00000611598 KCNT2Q6UVM3 1135 aa15.56■□□□□ 0.08
PCDHGB1-202ENST00000611598 TSHZ1Q6ZSZ6 1077 aa15.56■□□□□ 0.08
PCDHGB1-202ENST00000611598 FBXW8Q8N3Y1 598 aa15.56■□□□□ 0.08
PCDHGB1-202ENST00000611598 NME8Q8N427 588 aa15.56■□□□□ 0.08
PCDHGB1-202ENST00000611598 PPP4R1Q8TF05 950 aa15.56■□□□□ 0.08
PCDHGB1-202ENST00000611598 TRAPPC12Q8WVT3 735 aa15.56■□□□□ 0.08
PCDHGB1-202ENST00000611598 CLMNQ96JQ2 1002 aa15.56■□□□□ 0.08
PCDHGB1-202ENST00000611598 MINDY3Q9H8M7 445 aa15.56■□□□□ 0.08
PCDHGB1-202ENST00000611598 IFT122Q9HBG6 1241 aa15.56■□□□□ 0.08
PCDHGB1-202ENST00000611598 ADAMTS5Q9UNA0 930 aa15.56■□□□□ 0.08
PCDHGB1-202ENST00000611598 LACTBL1A8MY62 500 aa15.56■□□□□ 0.08
PCDHGB1-202ENST00000611598 E9PBE3 544 aa15.56■□□□□ 0.08
PCDHGB1-202ENST00000611598 KLHL41O60662 606 aa15.56■□□□□ 0.08
PCDHGB1-202ENST00000611598 NDST1P52848 882 aa15.56■□□□□ 0.08
PCDHGB1-202ENST00000611598 SESN2P58004 480 aaPredicted RBP15.56■□□□□ 0.08
PCDHGB1-202ENST00000611598 BSPRYQ5W0U4 402 aa15.56■□□□□ 0.08
PCDHGB1-202ENST00000611598 EEPD1Q7L9B9 569 aa15.56■□□□□ 0.08
PCDHGB1-202ENST00000611598 TMC7Q7Z402 723 aa15.56■□□□□ 0.08
PCDHGB1-202ENST00000611598 KBTBD6Q86V97 674 aa15.56■□□□□ 0.08
PCDHGB1-202ENST00000611598 CDKL3Q8IVW4 592 aaPredicted RBP15.56■□□□□ 0.08
PCDHGB1-202ENST00000611598 AGBL3Q8NEM8 1001 aa15.56■□□□□ 0.08
PCDHGB1-202ENST00000611598 FLAD1Q8NFF5 587 aa15.56■□□□□ 0.08
PCDHGB1-202ENST00000611598 CXorf38Q8TB03 319 aa15.56■□□□□ 0.08
PCDHGB1-202ENST00000611598 CMTM5Q96DZ9 223 aa15.56■□□□□ 0.08
PCDHGB1-202ENST00000611598 RPF1Q9H9Y2 349 aaKnown RBP15.56■□□□□ 0.08
PCDHGB1-202ENST00000611598 GBA2Q9HCG7 927 aaPredicted RBP15.56■□□□□ 0.08
PCDHGB1-202ENST00000611598 GPR25O00155 361 aa15.55■□□□□ 0.08
PCDHGB1-202ENST00000611598 GCATO75600 419 aa15.55■□□□□ 0.08
PCDHGB1-202ENST00000611598 VDRP11473 427 aa15.55■□□□□ 0.08
PCDHGB1-202ENST00000611598 OAZ1P54368 228 aa15.55■□□□□ 0.08
PCDHGB1-202ENST00000611598 HDAC4P56524 1084 aa15.55■□□□□ 0.08
PCDHGB1-202ENST00000611598 ABCE1P61221 599 aaKnown RBP15.55■□□□□ 0.08
PCDHGB1-202ENST00000611598 STILQ15468 1287 aa15.55■□□□□ 0.08
PCDHGB1-202ENST00000611598 TBC1D25Q3MII6 688 aa15.55■□□□□ 0.08
PCDHGB1-202ENST00000611598 NBPF12Q5TAG4 269 aaPredicted RBP15.55■□□□□ 0.08
PCDHGB1-202ENST00000611598 IER5Q5VY09 327 aa15.55■□□□□ 0.08
PCDHGB1-202ENST00000611598 PMF1Q6P1K2 205 aa15.55■□□□□ 0.08
PCDHGB1-202ENST00000611598 TNS4Q8IZW8 715 aa15.55■□□□□ 0.08
PCDHGB1-202ENST00000611598 AGR3Q8TD06 166 aa15.55■□□□□ 0.08
PCDHGB1-202ENST00000611598 COPG2Q9UBF2 871 aa15.55■□□□□ 0.08
PCDHGB1-202ENST00000611598 PHIPQ8WWQ0 1821 aa15.55■□□□□ 0.08
PCDHGB1-202ENST00000611598 ZBTB42B2RXF5 422 aa15.55■□□□□ 0.08
PCDHGB1-202ENST00000611598 CASQ2O14958 399 aaPredicted RBP15.55■□□□□ 0.08
PCDHGB1-202ENST00000611598 APBA3O96018 575 aa15.55■□□□□ 0.08
PCDHGB1-202ENST00000611598 ITGA2BP08514 1039 aa15.55■□□□□ 0.08
PCDHGB1-202ENST00000611598 IQCF3P0C7M6 154 aa15.55■□□□□ 0.08
PCDHGB1-202ENST00000611598 COX4I1P13073 169 aa15.55■□□□□ 0.08
PCDHGB1-202ENST00000611598 CNTFP26441 200 aa15.55■□□□□ 0.08
PCDHGB1-202ENST00000611598 RANBP1P43487 201 aa15.55■□□□□ 0.08
PCDHGB1-202ENST00000611598 MTTPP55157 894 aa15.55■□□□□ 0.08
PCDHGB1-202ENST00000611598 STXBP5Q5T5C0 1151 aa15.55■□□□□ 0.08
PCDHGB1-202ENST00000611598 STEAP4Q687X5 459 aa15.55■□□□□ 0.08
PCDHGB1-202ENST00000611598 CES3Q6UWW8 571 aa15.55■□□□□ 0.08
PCDHGB1-202ENST00000611598 OLFML1Q6UWY5 402 aa15.55■□□□□ 0.08
PCDHGB1-202ENST00000611598 CMC1Q7Z7K0 106 aa15.55■□□□□ 0.08
PCDHGB1-202ENST00000611598 SCUBE3Q8IX30 993 aa15.55■□□□□ 0.08
PCDHGB1-202ENST00000611598 ICA1LQ8NDH6 482 aa15.55■□□□□ 0.08
PCDHGB1-202ENST00000611598 KHSRPQ92945 711 aaKnown RBP eCLIP15.55■□□□□ 0.08
PCDHGB1-202ENST00000611598 B3GNT5Q9BYG0 378 aa15.55■□□□□ 0.08
PCDHGB1-202ENST00000611598 ALDH1A2O94788 518 aa15.54■□□□□ 0.08
PCDHGB1-202ENST00000611598 RALBP11234 206 aa15.54■□□□□ 0.08
PCDHGB1-202ENST00000611598 ALOX15P16050 662 aaPredicted RBP15.54■□□□□ 0.08
PCDHGB1-202ENST00000611598 MGAT1P26572 445 aa15.54■□□□□ 0.08
PCDHGB1-202ENST00000611598 FDFT1P37268 417 aa15.54■□□□□ 0.08
PCDHGB1-202ENST00000611598 XIAPP98170 497 aa15.54■□□□□ 0.08
PCDHGB1-202ENST00000611598 SNAPC2Q13487 334 aa15.54■□□□□ 0.08
PCDHGB1-202ENST00000611598 SEMA5AQ13591 1074 aa15.54■□□□□ 0.08
PCDHGB1-202ENST00000611598 TTLL12Q14166 644 aaPredicted RBP15.54■□□□□ 0.08
PCDHGB1-202ENST00000611598 DBN1Q16643 649 aa15.54■□□□□ 0.08
PCDHGB1-202ENST00000611598 PABPC1LQ4VXU2 614 aaKnown RBP15.54■□□□□ 0.08
PCDHGB1-202ENST00000611598 SLC9B1Q4ZJI4 515 aa15.54■□□□□ 0.08
PCDHGB1-202ENST00000611598 LRRC23Q53EV4 343 aaPredicted RBP15.54■□□□□ 0.08
PCDHGB1-202ENST00000611598 RTKN2Q8IZC4 609 aa15.54■□□□□ 0.08
PCDHGB1-202ENST00000611598 ZNF781Q8N8C0 355 aa15.54■□□□□ 0.08
PCDHGB1-202ENST00000611598 ZNF280CQ8ND82 737 aa15.54■□□□□ 0.08
PCDHGB1-202ENST00000611598 MAPK15Q8TD08 544 aa15.54■□□□□ 0.08
PCDHGB1-202ENST00000611598 ACMSDQ8TDX5 336 aa15.54■□□□□ 0.08
PCDHGB1-202ENST00000611598 PGBD4Q96DM1 585 aa15.54■□□□□ 0.08
PCDHGB1-202ENST00000611598 DNAJC1Q96KC8 554 aaKnown RBP15.54■□□□□ 0.08
PCDHGB1-202ENST00000611598 ZNF670Q9BS34 389 aa15.54■□□□□ 0.08
PCDHGB1-202ENST00000611598 CEP41Q9BYV8 373 aa15.54■□□□□ 0.08
PCDHGB1-202ENST00000611598 DHX35Q9H5Z1 703 aaKnown RBP15.54■□□□□ 0.08
PCDHGB1-202ENST00000611598 IRAK4Q9NWZ3 460 aa15.54■□□□□ 0.08
PCDHGB1-202ENST00000611598 MTMR10Q9NXD2 777 aa15.54■□□□□ 0.08
PCDHGB1-202ENST00000611598 UBAP1Q9NZ09 502 aa15.54■□□□□ 0.08
PCDHGB1-202ENST00000611598 DTNAQ9Y4J8 743 aa15.54■□□□□ 0.08
PCDHGB1-202ENST00000611598 TNS1Q9HBL0 1735 aaKnown RBP15.54■□□□□ 0.08
PCDHGB1-202ENST00000611598 SDC4P31431 198 aa15.54■□□□□ 0.08
PCDHGB1-202ENST00000611598 ALDH1A3P47895 512 aa15.54■□□□□ 0.08
PCDHGB1-202ENST00000611598 DEUP1Q05D60 604 aa15.54■□□□□ 0.08
PCDHGB1-202ENST00000611598 OGFRL1Q5TC84 451 aaPredicted RBP15.54■□□□□ 0.08
PCDHGB1-202ENST00000611598 PRAMEF18Q5VWM3 479 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms