RNA–Protein interactions for RNA: ENST00000610828.4

NEK3-205, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK3, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-205ENST00000610828 PHTF1Q9UMS5 762 aa14.05□□□□□ -0.16
NEK3-205ENST00000610828 TDRD15B5MCY1 1934 aaKnown RBP14.05□□□□□ -0.16
NEK3-205ENST00000610828 TMEM88BA6NKF7 163 aa14.04□□□□□ -0.16
NEK3-205ENST00000610828 CXorf49A8MYA2 514 aaPredicted RBP14.04□□□□□ -0.16
NEK3-205ENST00000610828 I6L893 689 aaPredicted RBP14.04□□□□□ -0.16
NEK3-205ENST00000610828 C1QAP02745 245 aa14.04□□□□□ -0.16
NEK3-205ENST00000610828 AMHP03971 560 aa14.04□□□□□ -0.16
NEK3-205ENST00000610828 FDFT1P37268 417 aa14.04□□□□□ -0.16
NEK3-205ENST00000610828 GLUD2P49448 558 aa14.04□□□□□ -0.16
NEK3-205ENST00000610828 AIF1P55008 147 aa14.04□□□□□ -0.16
NEK3-205ENST00000610828 TPI1P60174 286 aa14.04□□□□□ -0.16
NEK3-205ENST00000610828 TUSC3Q13454 348 aa14.04□□□□□ -0.16
NEK3-205ENST00000610828 PAFAH1B3Q15102 231 aaKnown RBP14.04□□□□□ -0.16
NEK3-205ENST00000610828 ARL13BQ3SXY8 428 aa14.04□□□□□ -0.16
NEK3-205ENST00000610828 FAM133BQ5BKY9 247 aaKnown RBP14.04□□□□□ -0.16
NEK3-205ENST00000610828 INTS6LQ5JSJ4 861 aaKnown RBP14.04□□□□□ -0.16
NEK3-205ENST00000610828 PDCD7Q8N8D1 485 aaKnown RBP14.04□□□□□ -0.16
NEK3-205ENST00000610828 PCSK9Q8NBP7 692 aaKnown RBP14.04□□□□□ -0.16
NEK3-205ENST00000610828 NTAN1Q96AB6 310 aa14.04□□□□□ -0.16
NEK3-205ENST00000610828 GRAMD1AQ96CP6 724 aa14.04□□□□□ -0.16
NEK3-205ENST00000610828 SERAC1Q96JX3 654 aa14.04□□□□□ -0.16
NEK3-205ENST00000610828 EBNA1BP2Q99848 306 aaKnown RBP14.04□□□□□ -0.16
NEK3-205ENST00000610828 CSNK1G1Q9HCP0 422 aa14.04□□□□□ -0.16
NEK3-205ENST00000610828 KLHL14Q9P2G3 628 aa14.04□□□□□ -0.16
NEK3-205ENST00000610828 FBXW11Q9UKB1 542 aa14.04□□□□□ -0.16
NEK3-205ENST00000610828 SF3B1O75533 1304 aaKnown RBP eCLIP14.04□□□□□ -0.16
NEK3-205ENST00000610828 WDR91A4D1P6 747 aa14.04□□□□□ -0.16
NEK3-205ENST00000610828 F8W810 466 aa14.04□□□□□ -0.16
NEK3-205ENST00000610828 TRDMT1O14717 391 aaKnown RBP14.04□□□□□ -0.16
NEK3-205ENST00000610828 DCLK1O15075 740 aa14.04□□□□□ -0.16
NEK3-205ENST00000610828 TM9SF1O15321 606 aa14.04□□□□□ -0.16
NEK3-205ENST00000610828 LPXNO60711 386 aa14.04□□□□□ -0.16
NEK3-205ENST00000610828 ALDH1A1P00352 501 aa14.04□□□□□ -0.16
NEK3-205ENST00000610828 ITGB1P05556 798 aa14.04□□□□□ -0.16
NEK3-205ENST00000610828 ERCC2P18074 760 aa14.04□□□□□ -0.16
NEK3-205ENST00000610828 FAM171BQ6P995 826 aa14.04□□□□□ -0.16
NEK3-205ENST00000610828 GSDMBQ8TAX9 411 aa14.04□□□□□ -0.16
NEK3-205ENST00000610828 THOC1Q96FV9 657 aaKnown RBP14.04□□□□□ -0.16
NEK3-205ENST00000610828 TMEM209Q96SK2 561 aa14.04□□□□□ -0.16
NEK3-205ENST00000610828 COLEC11Q9BWP8 271 aa14.04□□□□□ -0.16
NEK3-205ENST00000610828 TMLHEQ9NVH6 421 aa14.04□□□□□ -0.16
NEK3-205ENST00000610828 RNF186Q9NXI6 227 aa14.04□□□□□ -0.16
NEK3-205ENST00000610828 SLC17A7Q9P2U7 560 aa14.04□□□□□ -0.16
NEK3-205ENST00000610828 HGSO14964 777 aaPredicted RBP14.03□□□□□ -0.16
NEK3-205ENST00000610828 OPHN1O60890 802 aa14.03□□□□□ -0.16
NEK3-205ENST00000610828 CYP11A1P05108 521 aa14.03□□□□□ -0.16
NEK3-205ENST00000610828 PYGBP11216 843 aa14.03□□□□□ -0.16
NEK3-205ENST00000610828 PRKCHP24723 683 aa14.03□□□□□ -0.16
NEK3-205ENST00000610828 CST5P28325 142 aaPredicted RBP14.03□□□□□ -0.16
NEK3-205ENST00000610828 SCAPQ12770 1279 aa14.03□□□□□ -0.16
NEK3-205ENST00000610828 TTC39BQ5VTQ0 682 aaPredicted RBP14.03□□□□□ -0.16
NEK3-205ENST00000610828 OVOS1Q6IE37 1185 aa14.03□□□□□ -0.16
NEK3-205ENST00000610828 CASC4Q6P4E1 433 aa14.03□□□□□ -0.16
NEK3-205ENST00000610828 CD300LGQ6UXG3 332 aa14.03□□□□□ -0.16
NEK3-205ENST00000610828 RGS9BPQ6ZS82 235 aa14.03□□□□□ -0.16
NEK3-205ENST00000610828 BHLHA9Q7RTU4 235 aa14.03□□□□□ -0.16
NEK3-205ENST00000610828 OR10T2Q8NGX3 314 aa14.03□□□□□ -0.16
NEK3-205ENST00000610828 RSPH1Q8WYR4 309 aa14.03□□□□□ -0.16
NEK3-205ENST00000610828 PGAP3Q96FM1 320 aaPredicted RBP14.03□□□□□ -0.16
NEK3-205ENST00000610828 WDCPQ9H6R7 721 aa14.03□□□□□ -0.16
NEK3-205ENST00000610828 DMAP1Q9NPF5 467 aaPredicted RBP14.03□□□□□ -0.16
NEK3-205ENST00000610828 SMYD2Q9NRG4 433 aa14.03□□□□□ -0.16
NEK3-205ENST00000610828 PIH1D1Q9NWS0 290 aaKnown RBP14.03□□□□□ -0.16
NEK3-205ENST00000610828 PRKAG3Q9UGI9 489 aa14.03□□□□□ -0.16
NEK3-205ENST00000610828 DSEQ9UL01 958 aa14.03□□□□□ -0.16
NEK3-205ENST00000610828 TRIM49D1C9J1S8 452 aa14.03□□□□□ -0.16
NEK3-205ENST00000610828 M0QZQ0 153 aa14.03□□□□□ -0.16
NEK3-205ENST00000610828 KCNK1O00180 336 aa14.03□□□□□ -0.16
NEK3-205ENST00000610828 KRT37O76014 449 aa14.03□□□□□ -0.16
NEK3-205ENST00000610828 PSMB4P28070 264 aa14.03□□□□□ -0.16
NEK3-205ENST00000610828 BSPRYQ5W0U4 402 aa14.03□□□□□ -0.16
NEK3-205ENST00000610828 TRMT10BQ6PF06 316 aaKnown RBP14.03□□□□□ -0.16
NEK3-205ENST00000610828 LRRTM3Q86VH5 581 aa14.03□□□□□ -0.16
NEK3-205ENST00000610828 ZNF567Q8N184 647 aa14.03□□□□□ -0.16
NEK3-205ENST00000610828 ZNF75CPQ92670 426 aaPredicted RBP14.03□□□□□ -0.16
NEK3-205ENST00000610828 RMDN2Q96LZ7 410 aa14.03□□□□□ -0.16
NEK3-205ENST00000610828 PLCD4Q9BRC7 762 aa14.03□□□□□ -0.16
NEK3-205ENST00000610828 TKTL2Q9H0I9 626 aa14.03□□□□□ -0.16
NEK3-205ENST00000610828 RRN3Q9NYV6 651 aa14.03□□□□□ -0.16
NEK3-205ENST00000610828 STARD13Q9Y3M8 1113 aa14.03□□□□□ -0.16
NEK3-205ENST00000610828 UGT1A9O60656 530 aa14.02□□□□□ -0.16
NEK3-205ENST00000610828 UBOX5O94941 541 aa14.02□□□□□ -0.16
NEK3-205ENST00000610828 F9P00740 461 aa14.02□□□□□ -0.16
NEK3-205ENST00000610828 GSTA2P09210 222 aa14.02□□□□□ -0.16
NEK3-205ENST00000610828 CRADDP78560 199 aa14.02□□□□□ -0.16
NEK3-205ENST00000610828 CDK16Q00536 496 aa14.02□□□□□ -0.16
NEK3-205ENST00000610828 SLC20A2Q08357 652 aa14.02□□□□□ -0.16
NEK3-205ENST00000610828 WASHC5Q12768 1159 aa14.02□□□□□ -0.16
NEK3-205ENST00000610828 IFRD2Q12894 506 aaPredicted RBP14.02□□□□□ -0.16
NEK3-205ENST00000610828 SEMA3BQ13214 749 aa14.02□□□□□ -0.16
NEK3-205ENST00000610828 PDZD4Q76G19 769 aaPredicted RBP14.02□□□□□ -0.16
NEK3-205ENST00000610828 RNF180Q86T96 592 aa14.02□□□□□ -0.16
NEK3-205ENST00000610828 ECHDC2Q86YB7 292 aa14.02□□□□□ -0.16
NEK3-205ENST00000610828 CNPY4Q8N129 248 aa14.02□□□□□ -0.16
NEK3-205ENST00000610828 RNF34Q969K3 372 aa14.02□□□□□ -0.16
NEK3-205ENST00000610828 APOPT1Q96IL0 206 aa14.02□□□□□ -0.16
NEK3-205ENST00000610828 UGT1A7Q9HAW7 530 aa14.02□□□□□ -0.16
NEK3-205ENST00000610828 UGT1A10Q9HAW8 530 aa14.02□□□□□ -0.16
NEK3-205ENST00000610828 UGT1A8Q9HAW9 530 aa14.02□□□□□ -0.16
NEK3-205ENST00000610828 SLC12A4Q9UP95 1085 aa14.02□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms