RNA–Protein interactions for RNA: ENST00000609232.5

CTCFL-222, Transcript of CCCTC-binding factor like, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTCFL, Length 3,668 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-222ENST00000609232 LRRC34Q8IZ02 419 aa10.14□□□□□ -0.79
CTCFL-222ENST00000609232 PDIK1LQ8N165 341 aa10.14□□□□□ -0.79
CTCFL-222ENST00000609232 TTC9BQ8N6N2 239 aa10.14□□□□□ -0.79
CTCFL-222ENST00000609232 SLAIN1Q8ND83 568 aa10.14□□□□□ -0.79
CTCFL-222ENST00000609232 OR6K2Q8NGY2 324 aa10.14□□□□□ -0.79
CTCFL-222ENST00000609232 DDX27Q96GQ7 796 aaKnown RBP10.14□□□□□ -0.79
CTCFL-222ENST00000609232 MECRQ9BV79 373 aa10.14□□□□□ -0.79
CTCFL-222ENST00000609232 MGEA5O60502 916 aa10.14□□□□□ -0.79
CTCFL-222ENST00000609232 PPFIA2O75334 1257 aa10.14□□□□□ -0.79
CTCFL-222ENST00000609232 RPLP2P05387 115 aaKnown RBP10.14□□□□□ -0.79
CTCFL-222ENST00000609232 GJA1P17302 382 aa10.14□□□□□ -0.79
CTCFL-222ENST00000609232 GPD1P21695 349 aa10.14□□□□□ -0.79
CTCFL-222ENST00000609232 CUL1Q13616 776 aa10.14□□□□□ -0.79
CTCFL-222ENST00000609232 FAM171A1Q5VUB5 890 aa10.14□□□□□ -0.79
CTCFL-222ENST00000609232 METTL23Q86XA0 190 aa10.14□□□□□ -0.79
CTCFL-222ENST00000609232 RCOR2Q8IZ40 523 aa10.14□□□□□ -0.79
CTCFL-222ENST00000609232 IPMKQ8NFU5 416 aa10.14□□□□□ -0.79
CTCFL-222ENST00000609232 DCLK3Q9C098 648 aa10.14□□□□□ -0.79
CTCFL-222ENST00000609232 SARS2Q9NP81 518 aaKnown RBP10.14□□□□□ -0.79
CTCFL-222ENST00000609232 A0A1W2PQ45 241 aaPredicted RBP10.13□□□□□ -0.79
CTCFL-222ENST00000609232 A0A1W2PQY0 241 aa10.13□□□□□ -0.79
CTCFL-222ENST00000609232 AGRPO00253 132 aa10.13□□□□□ -0.79
CTCFL-222ENST00000609232 STAU1O95793 577 aaKnown RBP10.13□□□□□ -0.79
CTCFL-222ENST00000609232 TKTP29401 623 aaKnown RBP10.13□□□□□ -0.79
CTCFL-222ENST00000609232 MSH2P43246 934 aa10.13□□□□□ -0.79
CTCFL-222ENST00000609232 ROR1Q01973 937 aa10.13□□□□□ -0.79
CTCFL-222ENST00000609232 TSTA3Q13630 321 aaPredicted RBP10.13□□□□□ -0.79
CTCFL-222ENST00000609232 LRIG3Q6UXM1 1119 aa10.13□□□□□ -0.79
CTCFL-222ENST00000609232 BZW1Q7L1Q6 419 aaKnown RBP10.13□□□□□ -0.79
CTCFL-222ENST00000609232 ZNF280BQ86YH2 543 aa10.13□□□□□ -0.79
CTCFL-222ENST00000609232 B3GALNT2Q8NCR0 500 aa10.13□□□□□ -0.79
CTCFL-222ENST00000609232 SNF8Q96H20 258 aa10.13□□□□□ -0.79
CTCFL-222ENST00000609232 NSRP1Q9H0G5 558 aaKnown RBP10.13□□□□□ -0.79
CTCFL-222ENST00000609232 PCMTD2Q9NV79 361 aa10.13□□□□□ -0.79
CTCFL-222ENST00000609232 KLHL42Q9P2K6 505 aa10.13□□□□□ -0.79
CTCFL-222ENST00000609232 GIT1Q9Y2X7 761 aa10.13□□□□□ -0.79
CTCFL-222ENST00000609232 SIP14410 1827 aa10.13□□□□□ -0.79
CTCFL-222ENST00000609232 ZNF236Q9UL36 1845 aa10.13□□□□□ -0.79
CTCFL-222ENST00000609232 MOXD2PA6NHM9 499 aa10.13□□□□□ -0.79
CTCFL-222ENST00000609232 YJEFN3A6XGL0 299 aa10.13□□□□□ -0.79
CTCFL-222ENST00000609232 E7ENQ6 273 aa10.13□□□□□ -0.79
CTCFL-222ENST00000609232 MGRN1O60291 552 aa10.13□□□□□ -0.79
CTCFL-222ENST00000609232 IGHA2P01877 340 aa10.13□□□□□ -0.79
CTCFL-222ENST00000609232 KRT7P08729 469 aa10.13□□□□□ -0.79
CTCFL-222ENST00000609232 CKBP12277 381 aa10.13□□□□□ -0.79
CTCFL-222ENST00000609232 HOXC8P31273 242 aa10.13□□□□□ -0.79
CTCFL-222ENST00000609232 CDH5P33151 784 aaPredicted RBP10.13□□□□□ -0.79
CTCFL-222ENST00000609232 HSPA9P38646 679 aaKnown RBP10.13□□□□□ -0.79
CTCFL-222ENST00000609232 ELK3P41970 407 aa10.13□□□□□ -0.79
CTCFL-222ENST00000609232 BCAT1P54687 386 aa10.13□□□□□ -0.79
CTCFL-222ENST00000609232 VCPP55072 806 aaKnown RBP10.13□□□□□ -0.79
CTCFL-222ENST00000609232 DHX34Q14147 1143 aaKnown RBP10.13□□□□□ -0.79
CTCFL-222ENST00000609232 NOMO1Q15155 1222 aa10.13□□□□□ -0.79
CTCFL-222ENST00000609232 NOMO2Q5JPE7 1267 aa10.13□□□□□ -0.79
CTCFL-222ENST00000609232 HEATR6Q6AI08 1181 aaKnown RBP10.13□□□□□ -0.79
CTCFL-222ENST00000609232 KCNT2Q6UVM3 1135 aa10.13□□□□□ -0.79
CTCFL-222ENST00000609232 LDB1Q86U70 411 aaPredicted RBP10.13□□□□□ -0.79
CTCFL-222ENST00000609232 OSTM1Q86WC4 334 aa10.13□□□□□ -0.79
CTCFL-222ENST00000609232 MREGQ8N565 214 aa10.13□□□□□ -0.79
CTCFL-222ENST00000609232 EFCAB3Q8N7B9 438 aa10.13□□□□□ -0.79
CTCFL-222ENST00000609232 EXD1Q8NHP7 514 aa10.13□□□□□ -0.79
CTCFL-222ENST00000609232 CCHCR1Q8TD31 782 aa10.13□□□□□ -0.79
CTCFL-222ENST00000609232 PXYLP1Q8TE99 480 aa10.13□□□□□ -0.79
CTCFL-222ENST00000609232 FBF1Q8TES7 1133 aa10.13□□□□□ -0.79
CTCFL-222ENST00000609232 RNF139Q8WU17 664 aa10.13□□□□□ -0.79
CTCFL-222ENST00000609232 SNRNP25Q9BV90 132 aaKnown RBP10.13□□□□□ -0.79
CTCFL-222ENST00000609232 KDM4CQ9H3R0 1056 aa10.13□□□□□ -0.79
CTCFL-222ENST00000609232 DNAJB4Q9UDY4 337 aa10.13□□□□□ -0.79
CTCFL-222ENST00000609232 VANGL2Q9ULK5 521 aa10.13□□□□□ -0.79
CTCFL-222ENST00000609232 PAPSS1O43252 624 aaPredicted RBP10.13□□□□□ -0.79
CTCFL-222ENST00000609232 SH3BP5O60239 455 aa10.13□□□□□ -0.79
CTCFL-222ENST00000609232 DNAJC8O75937 253 aaPredicted RBP10.13□□□□□ -0.79
CTCFL-222ENST00000609232 PTPN1P18031 435 aaKnown RBP10.13□□□□□ -0.79
CTCFL-222ENST00000609232 RAB27AP51159 221 aa10.13□□□□□ -0.79
CTCFL-222ENST00000609232 CACNA2D1P54289 1103 aa10.13□□□□□ -0.79
CTCFL-222ENST00000609232 BST2Q10589 180 aaKnown RBP10.13□□□□□ -0.79
CTCFL-222ENST00000609232 SLC12A1Q13621 1099 aa10.13□□□□□ -0.79
CTCFL-222ENST00000609232 TFDP3Q5H9I0 405 aa10.13□□□□□ -0.79
CTCFL-222ENST00000609232 PCGF5Q86SE9 256 aa10.13□□□□□ -0.79
CTCFL-222ENST00000609232 KLHL29Q96CT2 875 aa10.13□□□□□ -0.79
CTCFL-222ENST00000609232 KLHL5Q96PQ7 755 aa10.13□□□□□ -0.79
CTCFL-222ENST00000609232 XPO6Q96QU8 1125 aaKnown RBP10.13□□□□□ -0.79
CTCFL-222ENST00000609232 ZBED2Q9BTP6 218 aa10.13□□□□□ -0.79
CTCFL-222ENST00000609232 ZDHHC4Q9NPG8 344 aa10.13□□□□□ -0.79
CTCFL-222ENST00000609232 AP4E1Q9UPM8 1137 aa10.13□□□□□ -0.79
CTCFL-222ENST00000609232 FAM187AA6NFU0 413 aa10.12□□□□□ -0.79
CTCFL-222ENST00000609232 SRRM3A6NNA2 597 aaPredicted RBP10.12□□□□□ -0.79
CTCFL-222ENST00000609232 SMIM24O75264 130 aa10.12□□□□□ -0.79
CTCFL-222ENST00000609232 TSPAN8P19075 237 aa10.12□□□□□ -0.79
CTCFL-222ENST00000609232 PCK1P35558 622 aa10.12□□□□□ -0.79
CTCFL-222ENST00000609232 ZNF252P-AS1Q0IIN9 211 aa10.12□□□□□ -0.79
CTCFL-222ENST00000609232 POU6F1Q14863 301 aa10.12□□□□□ -0.79
CTCFL-222ENST00000609232 TLDC1Q6P9B6 456 aa10.12□□□□□ -0.79
CTCFL-222ENST00000609232 MAP7D3Q8IWC1 876 aa10.12□□□□□ -0.79
CTCFL-222ENST00000609232 KATNAL2Q8IYT4 538 aa10.12□□□□□ -0.79
CTCFL-222ENST00000609232 TTC30BQ8N4P2 665 aa10.12□□□□□ -0.79
CTCFL-222ENST00000609232 DBF4BQ8NFT6 615 aa10.12□□□□□ -0.79
CTCFL-222ENST00000609232 OR6P1Q8NGX9 317 aa10.12□□□□□ -0.79
CTCFL-222ENST00000609232 AGAP11Q8TF27 550 aa10.12□□□□□ -0.79
CTCFL-222ENST00000609232 KBTBD7Q8WVZ9 684 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms