RNA–Protein interactions for RNA: ENST00000607049.5

PKNOX1-210, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 762 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-210ENST00000607049 RLN3Q8WXF3 142 aa14.96□□□□□ -0.01
PKNOX1-210ENST00000607049 DDX1Q92499 740 aaKnown RBP14.96□□□□□ -0.01
PKNOX1-210ENST00000607049 BTN2A3PQ96KV6 586 aa14.96□□□□□ -0.01
PKNOX1-210ENST00000607049 ACOX2Q99424 681 aa14.96□□□□□ -0.01
PKNOX1-210ENST00000607049 VPS16Q9H269 839 aa14.96□□□□□ -0.01
PKNOX1-210ENST00000607049 PLCB1Q9NQ66 1216 aa14.96□□□□□ -0.01
PKNOX1-210ENST00000607049 RRN3Q9NYV6 651 aa14.96□□□□□ -0.01
PKNOX1-210ENST00000607049 CALCOCO1Q9P1Z2 691 aa14.96□□□□□ -0.01
PKNOX1-210ENST00000607049 PAXBP1Q9Y5B6 917 aa14.96□□□□□ -0.01
PKNOX1-210ENST00000607049 BCLAF3A2AJT9 711 aaKnown RBP14.95□□□□□ -0.02
PKNOX1-210ENST00000607049 KHNYNO15037 678 aaKnown RBP14.95□□□□□ -0.02
PKNOX1-210ENST00000607049 NDUFS2O75306 463 aa14.95□□□□□ -0.02
PKNOX1-210ENST00000607049 MOCS3O95396 460 aa14.95□□□□□ -0.02
PKNOX1-210ENST00000607049 LSM8O95777 96 aaKnown RBP14.95□□□□□ -0.02
PKNOX1-210ENST00000607049 FYNP06241 537 aa14.95□□□□□ -0.02
PKNOX1-210ENST00000607049 CHRM1P11229 460 aaPredicted RBP14.95□□□□□ -0.02
PKNOX1-210ENST00000607049 ACADMP11310 421 aa14.95□□□□□ -0.02
PKNOX1-210ENST00000607049 PABPC1P11940 636 aaKnown RBP14.95□□□□□ -0.02
PKNOX1-210ENST00000607049 POLR2EP19388 210 aaKnown RBP14.95□□□□□ -0.02
PKNOX1-210ENST00000607049 CCR1P32246 355 aa14.95□□□□□ -0.02
PKNOX1-210ENST00000607049 CLCN1P35523 988 aa14.95□□□□□ -0.02
PKNOX1-210ENST00000607049 ST8SIA6P61647 398 aa14.95□□□□□ -0.02
PKNOX1-210ENST00000607049 RPL6Q02878 288 aaKnown RBP14.95□□□□□ -0.02
PKNOX1-210ENST00000607049 FNDC3BQ53EP0 1204 aaKnown RBP14.95□□□□□ -0.02
PKNOX1-210ENST00000607049 CDKAL1Q5VV42 579 aa14.95□□□□□ -0.02
PKNOX1-210ENST00000607049 SYPL2Q5VXT5 272 aa14.95□□□□□ -0.02
PKNOX1-210ENST00000607049 RFWD3Q6PCD5 774 aa14.95□□□□□ -0.02
PKNOX1-210ENST00000607049 KIAA1324Q6UXG2 1013 aaKnown RBP14.95□□□□□ -0.02
PKNOX1-210ENST00000607049 SND1Q7KZF4 910 aaKnown RBP eCLIP14.95□□□□□ -0.02
PKNOX1-210ENST00000607049 CHST9Q7L1S5 443 aa14.95□□□□□ -0.02
PKNOX1-210ENST00000607049 RABEPKQ7Z6M1 372 aa14.95□□□□□ -0.02
PKNOX1-210ENST00000607049 ADAM32Q8TC27 787 aa14.95□□□□□ -0.02
PKNOX1-210ENST00000607049 FCRL2Q96LA5 508 aaPredicted RBP14.95□□□□□ -0.02
PKNOX1-210ENST00000607049 SPAG5Q96R06 1193 aa14.95□□□□□ -0.02
PKNOX1-210ENST00000607049 PPP1R9BQ96SB3 815 aa14.95□□□□□ -0.02
PKNOX1-210ENST00000607049 CPXM1Q96SM3 734 aa14.95□□□□□ -0.02
PKNOX1-210ENST00000607049 PRDM16Q9HAZ2 1276 aa14.95□□□□□ -0.02
PKNOX1-210ENST00000607049 ABCB8Q9NUT2 735 aa14.95□□□□□ -0.02
PKNOX1-210ENST00000607049 FANCLQ9NW38 375 aa14.95□□□□□ -0.02
PKNOX1-210ENST00000607049 DDIT4Q9NX09 232 aa14.95□□□□□ -0.02
PKNOX1-210ENST00000607049 STIM2Q9P246 746 aa14.95□□□□□ -0.02
PKNOX1-210ENST00000607049 CYTH4Q9UIA0 394 aa14.95□□□□□ -0.02
PKNOX1-210ENST00000607049 GGA2Q9UJY4 613 aa14.95□□□□□ -0.02
PKNOX1-210ENST00000607049 FHOD1Q9Y613 1164 aa14.95□□□□□ -0.02
PKNOX1-210ENST00000607049 RAD54BQ9Y620 910 aa14.95□□□□□ -0.02
PKNOX1-210ENST00000607049 SPTBN4Q9H254 2564 aa14.95□□□□□ -0.02
PKNOX1-210ENST00000607049 WDR87Q6ZQQ6 2873 aa14.94□□□□□ -0.02
PKNOX1-210ENST00000607049 F5H5T6 163 aa14.94□□□□□ -0.02
PKNOX1-210ENST00000607049 EPHX1P07099 455 aa14.94□□□□□ -0.02
PKNOX1-210ENST00000607049 CYP11B1P15538 503 aa14.94□□□□□ -0.02
PKNOX1-210ENST00000607049 NDUFV2P19404 249 aa14.94□□□□□ -0.02
PKNOX1-210ENST00000607049 HLA-FP30511 346 aa14.94□□□□□ -0.02
PKNOX1-210ENST00000607049 SLC6A3Q01959 620 aa14.94□□□□□ -0.02
PKNOX1-210ENST00000607049 KCNMA1Q12791 1236 aa14.94□□□□□ -0.02
PKNOX1-210ENST00000607049 ZNF234Q14588 700 aa14.94□□□□□ -0.02
PKNOX1-210ENST00000607049 KRT31Q15323 416 aa14.94□□□□□ -0.02
PKNOX1-210ENST00000607049 CCDC6Q16204 474 aa14.94□□□□□ -0.02
PKNOX1-210ENST00000607049 MAP7D1Q3KQU3 841 aa14.94□□□□□ -0.02
PKNOX1-210ENST00000607049 FAM133BQ5BKY9 247 aaKnown RBP14.94□□□□□ -0.02
PKNOX1-210ENST00000607049 ZC3H12AQ5D1E8 599 aaKnown RBP14.94□□□□□ -0.02
PKNOX1-210ENST00000607049 RABGAP1LQ5R372 815 aa14.94□□□□□ -0.02
PKNOX1-210ENST00000607049 PLA2G2CQ5R387 149 aa14.94□□□□□ -0.02
PKNOX1-210ENST00000607049 LYSMD4Q5XG99 296 aa14.94□□□□□ -0.02
PKNOX1-210ENST00000607049 CHSY1Q86X52 802 aa14.94□□□□□ -0.02
PKNOX1-210ENST00000607049 ERICH1Q86X53 443 aa14.94□□□□□ -0.02
PKNOX1-210ENST00000607049 ZNF677Q86XU0 584 aa14.94□□□□□ -0.02
PKNOX1-210ENST00000607049 DEFB106AQ8N104 65 aa14.94□□□□□ -0.02
PKNOX1-210ENST00000607049 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.94□□□□□ -0.02
PKNOX1-210ENST00000607049 PIGKQ92643 395 aa14.94□□□□□ -0.02
PKNOX1-210ENST00000607049 PRCCQ92733 491 aaPredicted RBP14.94□□□□□ -0.02
PKNOX1-210ENST00000607049 SLC39A13Q96H72 371 aa14.94□□□□□ -0.02
PKNOX1-210ENST00000607049 FBRSQ9HAH7 460 aa14.94□□□□□ -0.02
PKNOX1-210ENST00000607049 STAP1Q9ULZ2 295 aa14.94□□□□□ -0.02
PKNOX1-210ENST00000607049 SYNJ2BP-COX16A0A087WUM0 186 aa14.93□□□□□ -0.02
PKNOX1-210ENST00000607049 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.93□□□□□ -0.02
PKNOX1-210ENST00000607049 GOLGA6L7A0A1B0GV03 622 aa14.93□□□□□ -0.02
PKNOX1-210ENST00000607049 WASH3PC4AMC7 463 aa14.93□□□□□ -0.02
PKNOX1-210ENST00000607049 F8VZ95 297 aa14.93□□□□□ -0.02
PKNOX1-210ENST00000607049 H0Y626 953 aa14.93□□□□□ -0.02
PKNOX1-210ENST00000607049 SLC30A4O14863 429 aa14.93□□□□□ -0.02
PKNOX1-210ENST00000607049 F9P00740 461 aa14.93□□□□□ -0.02
PKNOX1-210ENST00000607049 ASLP04424 464 aa14.93□□□□□ -0.02
PKNOX1-210ENST00000607049 DLDP09622 509 aaKnown RBP14.93□□□□□ -0.02
PKNOX1-210ENST00000607049 BCKDHBP21953 392 aa14.93□□□□□ -0.02
PKNOX1-210ENST00000607049 OXTRP30559 389 aa14.93□□□□□ -0.02
PKNOX1-210ENST00000607049 HOXD12P35452 270 aa14.93□□□□□ -0.02
PKNOX1-210ENST00000607049 IL12RB1P42701 662 aa14.93□□□□□ -0.02
PKNOX1-210ENST00000607049 LIMK1P53667 647 aa14.93□□□□□ -0.02
PKNOX1-210ENST00000607049 ATXN1P54253 815 aaKnown RBP14.93□□□□□ -0.02
PKNOX1-210ENST00000607049 OXCT1P55809 520 aa14.93□□□□□ -0.02
PKNOX1-210ENST00000607049 SF3A2Q15428 464 aaKnown RBP14.93□□□□□ -0.02
PKNOX1-210ENST00000607049 SYCP1Q15431 976 aa14.93□□□□□ -0.02
PKNOX1-210ENST00000607049 FUT11Q495W5 492 aa14.93□□□□□ -0.02
PKNOX1-210ENST00000607049 MS4A13Q5J8X5 152 aa14.93□□□□□ -0.02
PKNOX1-210ENST00000607049 SYCP2LQ5T4T6 812 aa14.93□□□□□ -0.02
PKNOX1-210ENST00000607049 TTC39BQ5VTQ0 682 aaPredicted RBP14.93□□□□□ -0.02
PKNOX1-210ENST00000607049 TAF3Q5VWG9 929 aa14.93□□□□□ -0.02
PKNOX1-210ENST00000607049 KIAA1211LQ6NV74 962 aa14.93□□□□□ -0.02
PKNOX1-210ENST00000607049 FAM183BPQ6ZVS7 135 aa14.93□□□□□ -0.02
PKNOX1-210ENST00000607049 SLC26A9Q7LBE3 791 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms