RNA–Protein interactions for RNA: ENST00000606782.1

CTSA-213, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 582 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-213ENST00000606782 IRX4P78413 519 aa13.92□□□□□ -0.18
CTSA-213ENST00000606782 APBA1Q02410 837 aa13.92□□□□□ -0.18
CTSA-213ENST00000606782 EIF4HQ15056 248 aaKnown RBP13.92□□□□□ -0.18
CTSA-213ENST00000606782 MEA1Q16626 185 aa13.92□□□□□ -0.18
CTSA-213ENST00000606782 GEN1Q17RS7 908 aa13.92□□□□□ -0.18
CTSA-213ENST00000606782 GJB7Q6PEY0 223 aa13.92□□□□□ -0.18
CTSA-213ENST00000606782 SLC23A3Q6PIS1 610 aa13.92□□□□□ -0.18
CTSA-213ENST00000606782 RRAGAQ7L523 313 aa13.92□□□□□ -0.18
CTSA-213ENST00000606782 TMEFF1Q8IYR6 380 aa13.92□□□□□ -0.18
CTSA-213ENST00000606782 SIX6OS1Q8N1H7 587 aa13.92□□□□□ -0.18
CTSA-213ENST00000606782 RNF139Q8WU17 664 aa13.92□□□□□ -0.18
CTSA-213ENST00000606782 PIGKQ92643 395 aa13.92□□□□□ -0.18
CTSA-213ENST00000606782 BHMTQ93088 406 aa13.92□□□□□ -0.18
CTSA-213ENST00000606782 MRGPRX1Q96LB2 322 aa13.92□□□□□ -0.18
CTSA-213ENST00000606782 KREMEN1Q96MU8 473 aa13.92□□□□□ -0.18
CTSA-213ENST00000606782 GANQ9H2C0 597 aa13.92□□□□□ -0.18
CTSA-213ENST00000606782 TMEM74BQ9NUR3 256 aa13.92□□□□□ -0.18
CTSA-213ENST00000606782 ELOVL2Q9NXB9 296 aa13.92□□□□□ -0.18
CTSA-213ENST00000606782 CACNA2D2Q9NY47 1150 aa13.92□□□□□ -0.18
CTSA-213ENST00000606782 CLEC4EQ9ULY5 219 aa13.92□□□□□ -0.18
CTSA-213ENST00000606782 DAAM1Q9Y4D1 1078 aa13.92□□□□□ -0.18
CTSA-213ENST00000606782 STON1Q9Y6Q2 735 aa13.92□□□□□ -0.18
CTSA-213ENST00000606782 MAP1BP46821 2468 aaKnown RBP13.91□□□□□ -0.18
CTSA-213ENST00000606782 PCNX2A6NKB5 2137 aa13.91□□□□□ -0.18
CTSA-213ENST00000606782 C4orf47A7E2U8 309 aa13.91□□□□□ -0.18
CTSA-213ENST00000606782 WASH3PC4AMC7 463 aa13.91□□□□□ -0.18
CTSA-213ENST00000606782 FBXO21O94952 628 aa13.91□□□□□ -0.18
CTSA-213ENST00000606782 KCNK5O95279 499 aa13.91□□□□□ -0.18
CTSA-213ENST00000606782 UCHL3P15374 230 aa13.91□□□□□ -0.18
CTSA-213ENST00000606782 RING1Q06587 406 aa13.91□□□□□ -0.18
CTSA-213ENST00000606782 LMAN2Q12907 356 aa13.91□□□□□ -0.18
CTSA-213ENST00000606782 MPPE1Q53F39 396 aa13.91□□□□□ -0.18
CTSA-213ENST00000606782 ADGRF1Q5T601 910 aa13.91□□□□□ -0.18
CTSA-213ENST00000606782 LYSMD4Q5XG99 296 aa13.91□□□□□ -0.18
CTSA-213ENST00000606782 ANKS1BQ7Z6G8 1248 aa13.91□□□□□ -0.18
CTSA-213ENST00000606782 KIAA0907Q7Z7F0 614 aaPredicted RBP13.91□□□□□ -0.18
CTSA-213ENST00000606782 UCMAQ8WVF2 138 aa13.91□□□□□ -0.18
CTSA-213ENST00000606782 EDEM1Q92611 657 aa13.91□□□□□ -0.18
CTSA-213ENST00000606782 AZIN2Q96A70 460 aa13.91□□□□□ -0.18
CTSA-213ENST00000606782 ZNF419Q96HQ0 510 aaPredicted RBP13.91□□□□□ -0.18
CTSA-213ENST00000606782 STK33Q9BYT3 514 aa13.91□□□□□ -0.18
CTSA-213ENST00000606782 TMEM9BQ9NQ34 198 aa13.91□□□□□ -0.18
CTSA-213ENST00000606782 SFMBT1Q9UHJ3 866 aa13.91□□□□□ -0.18
CTSA-213ENST00000606782 DNAJC12Q9UKB3 198 aa13.91□□□□□ -0.18
CTSA-213ENST00000606782 LAMA1P25391 3075 aa13.91□□□□□ -0.18
CTSA-213ENST00000606782 CEP192Q8TEP8 1941 aa13.9□□□□□ -0.18
CTSA-213ENST00000606782 LTFP02788 710 aa13.9□□□□□ -0.18
CTSA-213ENST00000606782 TPM3P06753 285 aa13.9□□□□□ -0.18
CTSA-213ENST00000606782 ITPKAP23677 461 aa13.9□□□□□ -0.18
CTSA-213ENST00000606782 BRD2P25440 801 aaKnown RBP13.9□□□□□ -0.18
CTSA-213ENST00000606782 HOXD9P28356 352 aaPredicted RBP13.9□□□□□ -0.18
CTSA-213ENST00000606782 PMLP29590 882 aa13.9□□□□□ -0.18
CTSA-213ENST00000606782 IL12RB1P42701 662 aa13.9□□□□□ -0.18
CTSA-213ENST00000606782 GPD2P43304 727 aa13.9□□□□□ -0.18
CTSA-213ENST00000606782 SHC2P98077 582 aa13.9□□□□□ -0.18
CTSA-213ENST00000606782 RPL6Q02878 288 aaKnown RBP13.9□□□□□ -0.18
CTSA-213ENST00000606782 TRIM61Q5EBN2 209 aa13.9□□□□□ -0.18
CTSA-213ENST00000606782 MPP7Q5T2T1 576 aa13.9□□□□□ -0.18
CTSA-213ENST00000606782 N4BP2L1Q5TBK1 243 aaPredicted RBP13.9□□□□□ -0.18
CTSA-213ENST00000606782 DAB2IPQ5VWQ8 1189 aa13.9□□□□□ -0.18
CTSA-213ENST00000606782 TMEM215Q68D42 235 aa13.9□□□□□ -0.18
CTSA-213ENST00000606782 BEND5Q7L4P6 421 aa13.9□□□□□ -0.18
CTSA-213ENST00000606782 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.9□□□□□ -0.18
CTSA-213ENST00000606782 NEK11Q8NG66 645 aa13.9□□□□□ -0.18
CTSA-213ENST00000606782 CEP76Q8TAP6 659 aa13.9□□□□□ -0.18
CTSA-213ENST00000606782 DDI1Q8WTU0 396 aa13.9□□□□□ -0.18
CTSA-213ENST00000606782 STK32AQ8WU08 396 aa13.9□□□□□ -0.18
CTSA-213ENST00000606782 EDEM3Q9BZQ6 932 aa13.9□□□□□ -0.18
CTSA-213ENST00000606782 TRIM5Q9C035 493 aa13.9□□□□□ -0.18
CTSA-213ENST00000606782 ITM2CQ9NQX7 267 aa13.9□□□□□ -0.18
CTSA-213ENST00000606782 FAM207AQ9NSI2 230 aaPredicted RBP13.9□□□□□ -0.18
CTSA-213ENST00000606782 AJAP1Q9UKB5 411 aaPredicted RBP13.9□□□□□ -0.18
CTSA-213ENST00000606782 RAD54BQ9Y620 910 aa13.9□□□□□ -0.18
CTSA-213ENST00000606782 CKAP5Q14008 2032 aa13.9□□□□□ -0.18
CTSA-213ENST00000606782 KMT2BQ9UMN6 2715 aaPredicted RBP13.89□□□□□ -0.19
CTSA-213ENST00000606782 M0QYV0 167 aa13.89□□□□□ -0.19
CTSA-213ENST00000606782 FOXN3O00409 490 aaPredicted RBP13.89□□□□□ -0.19
CTSA-213ENST00000606782 EPHB6O15197 1021 aa13.89□□□□□ -0.19
CTSA-213ENST00000606782 FYNP06241 537 aa13.89□□□□□ -0.19
CTSA-213ENST00000606782 SERPINF2P08697 491 aa13.89□□□□□ -0.19
CTSA-213ENST00000606782 LCP1P13796 627 aa13.89□□□□□ -0.19
CTSA-213ENST00000606782 CSRP1P21291 193 aaKnown RBP13.89□□□□□ -0.19
CTSA-213ENST00000606782 RGS7P49802 495 aa13.89□□□□□ -0.19
CTSA-213ENST00000606782 ZNF33AQ06730 810 aa13.89□□□□□ -0.19
CTSA-213ENST00000606782 NNTQ13423 1086 aa13.89□□□□□ -0.19
CTSA-213ENST00000606782 STARD3Q14849 445 aa13.89□□□□□ -0.19
CTSA-213ENST00000606782 DUOXA1Q1HG43 343 aa13.89□□□□□ -0.19
CTSA-213ENST00000606782 FUT11Q495W5 492 aa13.89□□□□□ -0.19
CTSA-213ENST00000606782 FIGNQ5HY92 759 aa13.89□□□□□ -0.19
CTSA-213ENST00000606782 RABEPKQ7Z6M1 372 aa13.89□□□□□ -0.19
CTSA-213ENST00000606782 SLC41A1Q8IVJ1 513 aa13.89□□□□□ -0.19
CTSA-213ENST00000606782 UNC45BQ8IWX7 931 aa13.89□□□□□ -0.19
CTSA-213ENST00000606782 WFIKKN2Q8TEU8 576 aa13.89□□□□□ -0.19
CTSA-213ENST00000606782 TMA16Q96EY4 203 aaKnown RBP13.89□□□□□ -0.19
CTSA-213ENST00000606782 PCMTD1Q96MG8 357 aaPredicted RBP13.89□□□□□ -0.19
CTSA-213ENST00000606782 CNTNAP3BQ96NU0 1288 aa13.89□□□□□ -0.19
CTSA-213ENST00000606782 NUP58Q9BVL2 599 aa13.89□□□□□ -0.19
CTSA-213ENST00000606782 NUSAP1Q9BXS6 441 aaKnown RBP13.89□□□□□ -0.19
CTSA-213ENST00000606782 SLC4A5Q9BY07 1137 aa13.89□□□□□ -0.19
CTSA-213ENST00000606782 CNTNAP3Q9BZ76 1288 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms