RNA–Protein interactions for RNA: ENST00000606749.1

CUX1-219, Transcript of cut like homeobox 1, humanhuman

TSL 4

Gene CUX1, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-219ENST00000606749 SRRTQ9BXP5 876 aaKnown RBP7.94□□□□□ -1.14
CUX1-219ENST00000606749 TMEM245Q9H330 911 aa7.94□□□□□ -1.14
CUX1-219ENST00000606749 SLC32A1Q9H598 525 aa7.94□□□□□ -1.14
CUX1-219ENST00000606749 DNAAF2Q9NVR5 837 aaKnown RBP7.94□□□□□ -1.14
CUX1-219ENST00000606749 PLA2G4CQ9UP65 541 aa7.94□□□□□ -1.14
CUX1-219ENST00000606749 CNTN6Q9UQ52 1028 aa7.94□□□□□ -1.14
CUX1-219ENST00000606749 NFE2L3Q9Y4A8 694 aa7.94□□□□□ -1.14
CUX1-219ENST00000606749 TPRP12270 2363 aaKnown RBP7.94□□□□□ -1.14
CUX1-219ENST00000606749 PCNX2A6NKB5 2137 aa7.94□□□□□ -1.14
CUX1-219ENST00000606749 ASCC3Q8N3C0 2202 aaKnown RBP7.94□□□□□ -1.14
CUX1-219ENST00000606749 METTL12A8MUP2 240 aa7.93□□□□□ -1.14
CUX1-219ENST00000606749 BIN1O00499 593 aa7.93□□□□□ -1.14
CUX1-219ENST00000606749 ACSL4O60488 711 aa7.93□□□□□ -1.14
CUX1-219ENST00000606749 TBL1XO60907 577 aa7.93□□□□□ -1.14
CUX1-219ENST00000606749 GADD45BO75293 160 aaPredicted RBP7.93□□□□□ -1.14
CUX1-219ENST00000606749 FBXO21O94952 628 aa7.93□□□□□ -1.14
CUX1-219ENST00000606749 GNA14O95837 355 aa7.93□□□□□ -1.14
CUX1-219ENST00000606749 FYNP06241 537 aa7.93□□□□□ -1.14
CUX1-219ENST00000606749 C7P10643 843 aa7.93□□□□□ -1.14
CUX1-219ENST00000606749 ACADMP11310 421 aa7.93□□□□□ -1.14
CUX1-219ENST00000606749 PABPC1P11940 636 aaKnown RBP7.93□□□□□ -1.14
CUX1-219ENST00000606749 HLA-EP13747 358 aa7.93□□□□□ -1.14
CUX1-219ENST00000606749 CD59P13987 128 aa7.93□□□□□ -1.14
CUX1-219ENST00000606749 SPINK2P20155 84 aa7.93□□□□□ -1.14
CUX1-219ENST00000606749 OXTRP30559 389 aa7.93□□□□□ -1.14
CUX1-219ENST00000606749 SLC6A4P31645 630 aa7.93□□□□□ -1.14
CUX1-219ENST00000606749 GPD2P43304 727 aa7.93□□□□□ -1.14
CUX1-219ENST00000606749 RPL34P49207 117 aaKnown RBP7.93□□□□□ -1.14
CUX1-219ENST00000606749 SLC11A2P49281 568 aa7.93□□□□□ -1.14
CUX1-219ENST00000606749 MARSP56192 900 aaKnown RBP7.93□□□□□ -1.14
CUX1-219ENST00000606749 STX17P56962 302 aa7.93□□□□□ -1.14
CUX1-219ENST00000606749 RING1Q06587 406 aa7.93□□□□□ -1.14
CUX1-219ENST00000606749 PTPRNQ16849 979 aa7.93□□□□□ -1.14
CUX1-219ENST00000606749 WDR45BQ5MNZ6 344 aa7.93□□□□□ -1.14
CUX1-219ENST00000606749 NUGGCQ68CJ6 796 aa7.93□□□□□ -1.14
CUX1-219ENST00000606749 CHST9Q7L1S5 443 aa7.93□□□□□ -1.14
CUX1-219ENST00000606749 MINDY1Q8N5J2 469 aa7.93□□□□□ -1.14
CUX1-219ENST00000606749 DDX51Q8N8A6 666 aaKnown RBP eCLIP7.93□□□□□ -1.14
CUX1-219ENST00000606749 OR2T3Q8NH03 318 aa7.93□□□□□ -1.14
CUX1-219ENST00000606749 WFIKKN2Q8TEU8 576 aa7.93□□□□□ -1.14
CUX1-219ENST00000606749 KREMEN1Q96MU8 473 aa7.93□□□□□ -1.14
CUX1-219ENST00000606749 IRX2Q9BZI1 471 aaPredicted RBP7.93□□□□□ -1.14
CUX1-219ENST00000606749 MIS12Q9H081 205 aa7.93□□□□□ -1.14
CUX1-219ENST00000606749 UBE2TQ9NPD8 197 aaPredicted RBP7.93□□□□□ -1.14
CUX1-219ENST00000606749 PRSS16Q9NQE7 514 aa7.93□□□□□ -1.14
CUX1-219ENST00000606749 ABCB8Q9NUT2 735 aa7.93□□□□□ -1.14
CUX1-219ENST00000606749 SUSD2Q9UGT4 822 aa7.93□□□□□ -1.14
CUX1-219ENST00000606749 GGA2Q9UJY4 613 aa7.93□□□□□ -1.14
CUX1-219ENST00000606749 CTNND2Q9UQB3 1225 aa7.93□□□□□ -1.14
CUX1-219ENST00000606749 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.93□□□□□ -1.14
CUX1-219ENST00000606749 ADAMTS9Q9P2N4 1935 aa7.93□□□□□ -1.14
CUX1-219ENST00000606749 A0A1B0GTW7 788 aa7.92□□□□□ -1.14
CUX1-219ENST00000606749 SPAARA0A1B0GVQ0 90 aa7.92□□□□□ -1.14
CUX1-219ENST00000606749 C1QTNF9BB2RNN3 333 aa7.92□□□□□ -1.14
CUX1-219ENST00000606749 BCAT2O15382 392 aaPredicted RBP7.92□□□□□ -1.14
CUX1-219ENST00000606749 IRAK2O43187 625 aa7.92□□□□□ -1.14
CUX1-219ENST00000606749 GJB3O75712 270 aa7.92□□□□□ -1.14
CUX1-219ENST00000606749 AFPP02771 609 aaKnown RBP7.92□□□□□ -1.14
CUX1-219ENST00000606749 ATP5BP06576 529 aaKnown RBP7.92□□□□□ -1.14
CUX1-219ENST00000606749 PROS1P07225 676 aa7.92□□□□□ -1.14
CUX1-219ENST00000606749 DLDP09622 509 aaKnown RBP7.92□□□□□ -1.14
CUX1-219ENST00000606749 C1QTNF9P0C862 333 aa7.92□□□□□ -1.14
CUX1-219ENST00000606749 KRT5P13647 590 aa7.92□□□□□ -1.14
CUX1-219ENST00000606749 ACADSBP45954 432 aa7.92□□□□□ -1.14
CUX1-219ENST00000606749 TBX4P57082 545 aa7.92□□□□□ -1.14
CUX1-219ENST00000606749 FAM193AP78312 1265 aa7.92□□□□□ -1.14
CUX1-219ENST00000606749 PAK1Q13153 545 aa7.92□□□□□ -1.14
CUX1-219ENST00000606749 SLC14A1Q13336 389 aa7.92□□□□□ -1.14
CUX1-219ENST00000606749 FNDC3BQ53EP0 1204 aaKnown RBP7.92□□□□□ -1.14
CUX1-219ENST00000606749 FAM133BQ5BKY9 247 aaKnown RBP7.92□□□□□ -1.14
CUX1-219ENST00000606749 DCAF12L1Q5VU92 463 aa7.92□□□□□ -1.14
CUX1-219ENST00000606749 MBLAC2Q68D91 279 aa7.92□□□□□ -1.14
CUX1-219ENST00000606749 NADSYN1Q6IA69 706 aa7.92□□□□□ -1.14
CUX1-219ENST00000606749 DENND1BQ6P3S1 775 aa7.92□□□□□ -1.14
CUX1-219ENST00000606749 FAM124AQ86V42 546 aa7.92□□□□□ -1.14
CUX1-219ENST00000606749 AHI1Q8N157 1196 aa7.92□□□□□ -1.14
CUX1-219ENST00000606749 ZNF366Q8N895 744 aa7.92□□□□□ -1.14
CUX1-219ENST00000606749 C1orf216Q8TAB5 229 aa7.92□□□□□ -1.14
CUX1-219ENST00000606749 FIBINQ8TAL6 211 aa7.92□□□□□ -1.14
CUX1-219ENST00000606749 WFDC5Q8TCV5 224 aa7.92□□□□□ -1.14
CUX1-219ENST00000606749 STK32AQ8WU08 396 aa7.92□□□□□ -1.14
CUX1-219ENST00000606749 ZNF606Q8WXB4 792 aa7.92□□□□□ -1.14
CUX1-219ENST00000606749 GOLGA1Q92805 767 aa7.92□□□□□ -1.14
CUX1-219ENST00000606749 MYEOVQ96EZ4 313 aa7.92□□□□□ -1.14
CUX1-219ENST00000606749 SLC39A13Q96H72 371 aa7.92□□□□□ -1.14
CUX1-219ENST00000606749 LMLNQ96KR4 655 aa7.92□□□□□ -1.14
CUX1-219ENST00000606749 FCRL2Q96LA5 508 aaPredicted RBP7.92□□□□□ -1.14
CUX1-219ENST00000606749 CAMK1GQ96NX5 476 aa7.92□□□□□ -1.14
CUX1-219ENST00000606749 DDX50Q9BQ39 737 aaKnown RBP7.92□□□□□ -1.14
CUX1-219ENST00000606749 SCNM1Q9BWG6 230 aa7.92□□□□□ -1.14
CUX1-219ENST00000606749 ZDHHC5Q9C0B5 715 aa7.92□□□□□ -1.14
CUX1-219ENST00000606749 INTS2Q9H0H0 1204 aaKnown RBP7.92□□□□□ -1.14
CUX1-219ENST00000606749 STIM2Q9P246 746 aa7.92□□□□□ -1.14
CUX1-219ENST00000606749 NAALADL1Q9UQQ1 740 aa7.92□□□□□ -1.14
CUX1-219ENST00000606749 TLR6Q9Y2C9 796 aa7.92□□□□□ -1.14
CUX1-219ENST00000606749 ACACBO00763 2458 aa7.92□□□□□ -1.14
CUX1-219ENST00000606749 PCDH15Q96QU1 1955 aa7.91□□□□□ -1.14
CUX1-219ENST00000606749 FRYQ5TBA9 3013 aa7.91□□□□□ -1.14
CUX1-219ENST00000606749 MEI4A8MW99 385 aa7.91□□□□□ -1.14
CUX1-219ENST00000606749 MED7O43513 233 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 106.9 ms