RNA–Protein interactions for RNA: ENST00000606273.3

HLA-F-230, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 579 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-230ENST00000606273 MED15Q96RN5 788 aa12.9□□□□□ -0.34
HLA-F-230ENST00000606273 CDC6Q99741 560 aa12.9□□□□□ -0.34
HLA-F-230ENST00000606273 PI4K2AQ9BTU6 479 aa12.9□□□□□ -0.34
HLA-F-230ENST00000606273 PDE11AQ9HCR9 933 aa12.9□□□□□ -0.34
HLA-F-230ENST00000606273 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.9□□□□□ -0.34
HLA-F-230ENST00000606273 RBAKQ9NYW8 714 aaPredicted RBP12.9□□□□□ -0.34
HLA-F-230ENST00000606273 TMEM63CQ9P1W3 806 aa12.9□□□□□ -0.34
HLA-F-230ENST00000606273 CALCOCO1Q9P1Z2 691 aa12.9□□□□□ -0.34
HLA-F-230ENST00000606273 UXTQ9UBK9 157 aaPredicted RBP12.9□□□□□ -0.34
HLA-F-230ENST00000606273 SUSD2Q9UGT4 822 aa12.9□□□□□ -0.34
HLA-F-230ENST00000606273 PCDHB5Q9Y5E4 795 aa12.9□□□□□ -0.34
HLA-F-230ENST00000606273 CFAP46Q8IYW2 2715 aa12.9□□□□□ -0.35
HLA-F-230ENST00000606273 C2orf78A6NCI8 922 aa12.89□□□□□ -0.35
HLA-F-230ENST00000606273 PIRO00625 290 aa12.89□□□□□ -0.35
HLA-F-230ENST00000606273 ZNF217O75362 1048 aa12.89□□□□□ -0.35
HLA-F-230ENST00000606273 NOL4O94818 638 aa12.89□□□□□ -0.35
HLA-F-230ENST00000606273 LDHAP00338 332 aaKnown RBP12.89□□□□□ -0.35
HLA-F-230ENST00000606273 APODP05090 189 aa12.89□□□□□ -0.35
HLA-F-230ENST00000606273 CYP17A1P05093 508 aa12.89□□□□□ -0.35
HLA-F-230ENST00000606273 HLA-EP13747 358 aa12.89□□□□□ -0.35
HLA-F-230ENST00000606273 EIF2DP41214 584 aaKnown RBP12.89□□□□□ -0.35
HLA-F-230ENST00000606273 GRIA2P42262 883 aa12.89□□□□□ -0.35
HLA-F-230ENST00000606273 SNRPFP62306 86 aaKnown RBP12.89□□□□□ -0.35
HLA-F-230ENST00000606273 NRG1Q02297 640 aaPredicted RBP12.89□□□□□ -0.35
HLA-F-230ENST00000606273 DHCR24Q15392 516 aa12.89□□□□□ -0.35
HLA-F-230ENST00000606273 SNRNP35Q16560 246 aaKnown RBP12.89□□□□□ -0.35
HLA-F-230ENST00000606273 KYAT1Q16773 422 aa12.89□□□□□ -0.35
HLA-F-230ENST00000606273 DDR2Q16832 855 aa12.89□□□□□ -0.35
HLA-F-230ENST00000606273 SYCP2LQ5T4T6 812 aa12.89□□□□□ -0.35
HLA-F-230ENST00000606273 SPATA1Q5VX52 437 aa12.89□□□□□ -0.35
HLA-F-230ENST00000606273 ANKRD40Q6AI12 368 aa12.89□□□□□ -0.35
HLA-F-230ENST00000606273 HS2ST1Q7LGA3 356 aa12.89□□□□□ -0.35
HLA-F-230ENST00000606273 METTL23Q86XA0 190 aa12.89□□□□□ -0.35
HLA-F-230ENST00000606273 XXYLT1Q8NBI6 393 aa12.89□□□□□ -0.35
HLA-F-230ENST00000606273 SPATA18Q8TC71 538 aa12.89□□□□□ -0.35
HLA-F-230ENST00000606273 TRMT2BQ96GJ1 504 aaKnown RBP12.89□□□□□ -0.35
HLA-F-230ENST00000606273 GAREM1Q9H706 876 aa12.89□□□□□ -0.35
HLA-F-230ENST00000606273 TM7SF3Q9NS93 570 aa12.89□□□□□ -0.35
HLA-F-230ENST00000606273 TMLHEQ9NVH6 421 aa12.89□□□□□ -0.35
HLA-F-230ENST00000606273 FRRS1LQ9P0K9 344 aa12.89□□□□□ -0.35
HLA-F-230ENST00000606273 DSEQ9UL01 958 aa12.89□□□□□ -0.35
HLA-F-230ENST00000606273 ARHGAP26Q9UNA1 814 aa12.89□□□□□ -0.35
HLA-F-230ENST00000606273 PTPRDP23468 1912 aa12.89□□□□□ -0.35
HLA-F-230ENST00000606273 ZNF233A6NK53 670 aa12.88□□□□□ -0.35
HLA-F-230ENST00000606273 XPOTO43592 962 aaKnown RBP12.88□□□□□ -0.35
HLA-F-230ENST00000606273 TLX3O43711 291 aaPredicted RBP12.88□□□□□ -0.35
HLA-F-230ENST00000606273 EXOC3O60645 756 aa12.88□□□□□ -0.35
HLA-F-230ENST00000606273 DLG4P78352 724 aa12.88□□□□□ -0.35
HLA-F-230ENST00000606273 PLAURQ03405 335 aa12.88□□□□□ -0.35
HLA-F-230ENST00000606273 DPCR1Q3MIW9 517 aa12.88□□□□□ -0.35
HLA-F-230ENST00000606273 WDR45BQ5MNZ6 344 aa12.88□□□□□ -0.35
HLA-F-230ENST00000606273 C9orf57Q5W0N0 161 aa12.88□□□□□ -0.35
HLA-F-230ENST00000606273 KLHL10Q6JEL2 608 aa12.88□□□□□ -0.35
HLA-F-230ENST00000606273 RHBDF2Q6PJF5 856 aa12.88□□□□□ -0.35
HLA-F-230ENST00000606273 RBM43Q6ZSC3 357 aaKnown RBP12.88□□□□□ -0.35
HLA-F-230ENST00000606273 C12orf40Q86WS4 652 aa12.88□□□□□ -0.35
HLA-F-230ENST00000606273 DCP1BQ8IZD4 617 aaKnown RBP12.88□□□□□ -0.35
HLA-F-230ENST00000606273 OR5B17Q8NGF7 314 aa12.88□□□□□ -0.35
HLA-F-230ENST00000606273 CXorf38Q8TB03 319 aa12.88□□□□□ -0.35
HLA-F-230ENST00000606273 TMEM174Q8WUU8 243 aa12.88□□□□□ -0.35
HLA-F-230ENST00000606273 DUSP9Q99956 384 aaKnown RBP12.88□□□□□ -0.35
HLA-F-230ENST00000606273 ASB7Q9H672 318 aa12.88□□□□□ -0.35
HLA-F-230ENST00000606273 ARHGEF4Q9NR80 690 aa12.88□□□□□ -0.35
HLA-F-230ENST00000606273 IGSF5Q9NSI5 407 aa12.88□□□□□ -0.35
HLA-F-230ENST00000606273 CGNQ9P2M7 1197 aaKnown RBP12.88□□□□□ -0.35
HLA-F-230ENST00000606273 CYP8B1Q9UNU6 501 aa12.88□□□□□ -0.35
HLA-F-230ENST00000606273 NOVA2Q9UNW9 492 aaKnown RBP12.88□□□□□ -0.35
HLA-F-230ENST00000606273 SHROOM3Q8TF72 1996 aa12.88□□□□□ -0.35
HLA-F-230ENST00000606273 KIAA1549LQ6ZVL6 1849 aa12.88□□□□□ -0.35
HLA-F-230ENST00000606273 A0A1W2PQF6 199 aa12.87□□□□□ -0.35
HLA-F-230ENST00000606273 PYCARD-AS1I3L0S3 204 aa12.87□□□□□ -0.35
HLA-F-230ENST00000606273 LEFTY2O00292 366 aa12.87□□□□□ -0.35
HLA-F-230ENST00000606273 PLK4O00444 970 aa12.87□□□□□ -0.35
HLA-F-230ENST00000606273 CYB561D2O14569 222 aa12.87□□□□□ -0.35
HLA-F-230ENST00000606273 KIAA0391O15091 583 aaKnown RBP12.87□□□□□ -0.35
HLA-F-230ENST00000606273 RRP8O43159 456 aaKnown RBP12.87□□□□□ -0.35
HLA-F-230ENST00000606273 CALUO43852 315 aaPredicted RBP12.87□□□□□ -0.35
HLA-F-230ENST00000606273 CILPO75339 1184 aa12.87□□□□□ -0.35
HLA-F-230ENST00000606273 MBD3O95983 291 aa12.87□□□□□ -0.35
HLA-F-230ENST00000606273 NR2F2P24468 414 aa12.87□□□□□ -0.35
HLA-F-230ENST00000606273 STX17P56962 302 aa12.87□□□□□ -0.35
HLA-F-230ENST00000606273 GPLD1P80108 840 aa12.87□□□□□ -0.35
HLA-F-230ENST00000606273 POU5F1Q01860 360 aaKnown RBP12.87□□□□□ -0.35
HLA-F-230ENST00000606273 CYP24A1Q07973 514 aa12.87□□□□□ -0.35
HLA-F-230ENST00000606273 TMEM132DQ14C87 1099 aa12.87□□□□□ -0.35
HLA-F-230ENST00000606273 NFIL3Q16649 462 aa12.87□□□□□ -0.35
HLA-F-230ENST00000606273 HLA-BQ31612 363 aa12.87□□□□□ -0.35
HLA-F-230ENST00000606273 C1orf220Q5T0J3 134 aa12.87□□□□□ -0.35
HLA-F-230ENST00000606273 TTI2Q6NXR4 508 aa12.87□□□□□ -0.35
HLA-F-230ENST00000606273 FILIP1Q7Z7B0 1213 aa12.87□□□□□ -0.35
HLA-F-230ENST00000606273 CD302Q8IX05 232 aa12.87□□□□□ -0.35
HLA-F-230ENST00000606273 FAM181AQ8N9Y4 354 aa12.87□□□□□ -0.35
HLA-F-230ENST00000606273 GOLGA5Q8TBA6 731 aa12.87□□□□□ -0.35
HLA-F-230ENST00000606273 NELFBQ8WX92 580 aa12.87□□□□□ -0.35
HLA-F-230ENST00000606273 DNASE2BQ8WZ79 361 aa12.87□□□□□ -0.35
HLA-F-230ENST00000606273 CCDC127Q96BQ5 260 aa12.87□□□□□ -0.35
HLA-F-230ENST00000606273 TSPAN18Q96SJ8 248 aa12.87□□□□□ -0.35
HLA-F-230ENST00000606273 CTNND2Q9UQB3 1225 aa12.87□□□□□ -0.35
HLA-F-230ENST00000606273 FNDC3AQ9Y2H6 1198 aaKnown RBP12.87□□□□□ -0.35
HLA-F-230ENST00000606273 PCDHGB2Q9Y5G2 931 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms