RNA–Protein interactions for RNA: ENST00000604599.1

CDCA3-212, Transcript of cell division cycle associated 3, humanhuman

TSL 2

Gene CDCA3, Length 2,917 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-212ENST00000604599 TAP1Q03518 808 aa12.78□□□□□ -0.36
CDCA3-212ENST00000604599 MTMR1Q13613 665 aa12.78□□□□□ -0.36
CDCA3-212ENST00000604599 ZNF423Q2M1K9 1284 aa12.78□□□□□ -0.36
CDCA3-212ENST00000604599 TKFCQ3LXA3 575 aa12.78□□□□□ -0.36
CDCA3-212ENST00000604599 PTPN20Q4JDL3 420 aa12.78□□□□□ -0.36
CDCA3-212ENST00000604599 PPM1JQ5JR12 505 aa12.78□□□□□ -0.36
CDCA3-212ENST00000604599 TMEM53Q6P2H8 277 aa12.78□□□□□ -0.36
CDCA3-212ENST00000604599 DHRS4L2Q6PKH6 230 aa12.78□□□□□ -0.36
CDCA3-212ENST00000604599 SCARA5Q6ZMJ2 495 aa12.78□□□□□ -0.36
CDCA3-212ENST00000604599 ZBTB46Q86UZ6 589 aa12.78□□□□□ -0.36
CDCA3-212ENST00000604599 SLC15A3Q8IY34 581 aa12.78□□□□□ -0.36
CDCA3-212ENST00000604599 C4orf19Q8IY42 314 aa12.78□□□□□ -0.36
CDCA3-212ENST00000604599 DQX1Q8TE96 717 aaKnown RBP12.78□□□□□ -0.36
CDCA3-212ENST00000604599 TFAP2BQ92481 460 aa12.78□□□□□ -0.36
CDCA3-212ENST00000604599 RCN3Q96D15 328 aa12.78□□□□□ -0.36
CDCA3-212ENST00000604599 ZBTB45Q96K62 511 aaPredicted RBP12.78□□□□□ -0.36
CDCA3-212ENST00000604599 KLC2Q9H0B6 622 aa12.78□□□□□ -0.36
CDCA3-212ENST00000604599 PAK5Q9P286 719 aa12.78□□□□□ -0.36
CDCA3-212ENST00000604599 MYO18AQ92614 2054 aaKnown RBP12.78□□□□□ -0.36
CDCA3-212ENST00000604599 PRSS51A0A1B0GVH4 220 aa12.78□□□□□ -0.36
CDCA3-212ENST00000604599 TMEM247A6NEH6 219 aa12.78□□□□□ -0.36
CDCA3-212ENST00000604599 GLRA3O75311 464 aa12.78□□□□□ -0.36
CDCA3-212ENST00000604599 SERPINB2P05120 415 aa12.78□□□□□ -0.36
CDCA3-212ENST00000604599 RBL1P28749 1068 aa12.78□□□□□ -0.36
CDCA3-212ENST00000604599 GRIA1P42261 906 aa12.78□□□□□ -0.36
CDCA3-212ENST00000604599 TAZQ16635 292 aa12.78□□□□□ -0.36
CDCA3-212ENST00000604599 CCDC92Q53HC0 331 aaPredicted RBP12.78□□□□□ -0.36
CDCA3-212ENST00000604599 PIGGQ5H8A4 983 aa12.78□□□□□ -0.36
CDCA3-212ENST00000604599 MYO1HQ8N1T3 1032 aa12.78□□□□□ -0.36
CDCA3-212ENST00000604599 KYQ8NBH2 561 aa12.78□□□□□ -0.36
CDCA3-212ENST00000604599 RNF169Q8NCN4 708 aa12.78□□□□□ -0.36
CDCA3-212ENST00000604599 PDCD6IPQ8WUM4 868 aaKnown RBP12.78□□□□□ -0.36
CDCA3-212ENST00000604599 VPS50Q96JG6 964 aa12.78□□□□□ -0.36
CDCA3-212ENST00000604599 CEP170P1Q96L14 293 aa12.78□□□□□ -0.36
CDCA3-212ENST00000604599 TMEM79Q9BSE2 394 aa12.78□□□□□ -0.36
CDCA3-212ENST00000604599 CDCA7Q9BWT1 371 aaPredicted RBP12.78□□□□□ -0.36
CDCA3-212ENST00000604599 SLC4A5Q9BY07 1137 aa12.78□□□□□ -0.36
CDCA3-212ENST00000604599 INO80BQ9C086 356 aaPredicted RBP12.78□□□□□ -0.36
CDCA3-212ENST00000604599 FAM96AQ9H5X1 160 aa12.78□□□□□ -0.36
CDCA3-212ENST00000604599 ACSS2Q9NR19 701 aa12.78□□□□□ -0.36
CDCA3-212ENST00000604599 TBC1D23Q9NUY8 699 aa12.78□□□□□ -0.36
CDCA3-212ENST00000604599 FBXO28Q9NVF7 368 aa12.78□□□□□ -0.36
CDCA3-212ENST00000604599 AGO2Q9UKV8 859 aaKnown RBP12.78□□□□□ -0.36
CDCA3-212ENST00000604599 PRPF19Q9UMS4 504 aaKnown RBP12.78□□□□□ -0.36
CDCA3-212ENST00000604599 CNTN6Q9UQ52 1028 aa12.78□□□□□ -0.36
CDCA3-212ENST00000604599 COQ6Q9Y2Z9 468 aa12.78□□□□□ -0.36
CDCA3-212ENST00000604599 F5H423 210 aaPredicted RBP12.78□□□□□ -0.36
CDCA3-212ENST00000604599 LYPLA2O95372 231 aa12.78□□□□□ -0.36
CDCA3-212ENST00000604599 IDO1P14902 403 aa12.78□□□□□ -0.36
CDCA3-212ENST00000604599 ZNF26P17031 533 aaPredicted RBP12.78□□□□□ -0.36
CDCA3-212ENST00000604599 PIK3R1P27986 724 aa12.78□□□□□ -0.36
CDCA3-212ENST00000604599 SERPINB9P50453 376 aa12.78□□□□□ -0.36
CDCA3-212ENST00000604599 CDH6P55285 790 aa12.78□□□□□ -0.36
CDCA3-212ENST00000604599 CLDN10P78369 228 aa12.78□□□□□ -0.36
CDCA3-212ENST00000604599 ATP1A4Q13733 1029 aa12.78□□□□□ -0.36
CDCA3-212ENST00000604599 PRKG1Q13976 671 aa12.78□□□□□ -0.36
CDCA3-212ENST00000604599 PDCD4Q53EL6 469 aaKnown RBP12.78□□□□□ -0.36
CDCA3-212ENST00000604599 C16orf89Q6UX73 402 aa12.78□□□□□ -0.36
CDCA3-212ENST00000604599 LDHDQ86WU2 507 aa12.78□□□□□ -0.36
CDCA3-212ENST00000604599 TMEM126BQ8IUX1 230 aa12.78□□□□□ -0.36
CDCA3-212ENST00000604599 TNS4Q8IZW8 715 aa12.78□□□□□ -0.36
CDCA3-212ENST00000604599 TMEM102Q8N9M5 508 aaPredicted RBP12.78□□□□□ -0.36
CDCA3-212ENST00000604599 ATP6V1E2Q96A05 226 aa12.78□□□□□ -0.36
CDCA3-212ENST00000604599 RMND5BQ96G75 393 aaPredicted RBP12.78□□□□□ -0.36
CDCA3-212ENST00000604599 COX4I2Q96KJ9 171 aa12.78□□□□□ -0.36
CDCA3-212ENST00000604599 WDR55Q9H6Y2 383 aaPredicted RBP12.78□□□□□ -0.36
CDCA3-212ENST00000604599 COQ10BQ9H8M1 238 aa12.78□□□□□ -0.36
CDCA3-212ENST00000604599 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.78□□□□□ -0.36
CDCA3-212ENST00000604599 SLC38A7Q9NVC3 462 aa12.78□□□□□ -0.36
CDCA3-212ENST00000604599 TMEM216Q9P0N5 145 aa12.78□□□□□ -0.36
CDCA3-212ENST00000604599 MYRFQ9Y2G1 1151 aa12.78□□□□□ -0.36
CDCA3-212ENST00000604599 FUOMA2VDF0 154 aa12.77□□□□□ -0.36
CDCA3-212ENST00000604599 PIK3R2O00459 728 aa12.77□□□□□ -0.36
CDCA3-212ENST00000604599 E2F6O75461 281 aa12.77□□□□□ -0.36
CDCA3-212ENST00000604599 LSM8O95777 96 aaKnown RBP12.77□□□□□ -0.36
CDCA3-212ENST00000604599 OCM2P0CE71 109 aa12.77□□□□□ -0.36
CDCA3-212ENST00000604599 OCMP0CE72 109 aaPredicted RBP12.77□□□□□ -0.36
CDCA3-212ENST00000604599 EIF2AK2P19525 551 aaKnown RBP12.77□□□□□ -0.36
CDCA3-212ENST00000604599 GRK2P25098 689 aa12.77□□□□□ -0.36
CDCA3-212ENST00000604599 PRDX6P30041 224 aa12.77□□□□□ -0.36
CDCA3-212ENST00000604599 DPP6P42658 865 aa12.77□□□□□ -0.36
CDCA3-212ENST00000604599 CLCN2P51788 898 aa12.77□□□□□ -0.36
CDCA3-212ENST00000604599 ZNF132P52740 706 aa12.77□□□□□ -0.36
CDCA3-212ENST00000604599 PSMC1P62191 440 aaKnown RBP12.77□□□□□ -0.36
CDCA3-212ENST00000604599 CRADDP78560 199 aa12.77□□□□□ -0.36
CDCA3-212ENST00000604599 CTBSQ01459 385 aa12.77□□□□□ -0.36
CDCA3-212ENST00000604599 MGAT5BQ3V5L5 792 aa12.77□□□□□ -0.36
CDCA3-212ENST00000604599 RAB6CQ53S08 254 aa12.77□□□□□ -0.36
CDCA3-212ENST00000604599 IL23RQ5VWK5 629 aa12.77□□□□□ -0.36
CDCA3-212ENST00000604599 OGFOD2Q6N063 350 aa12.77□□□□□ -0.36
CDCA3-212ENST00000604599 HHIPL2Q6UWX4 724 aa12.77□□□□□ -0.36
CDCA3-212ENST00000604599 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.77□□□□□ -0.36
CDCA3-212ENST00000604599 ATP2A3Q93084 1043 aa12.77□□□□□ -0.36
CDCA3-212ENST00000604599 ISOC1Q96CN7 298 aa12.77□□□□□ -0.36
CDCA3-212ENST00000604599 IMPG2Q9BZV3 1241 aa12.77□□□□□ -0.36
CDCA3-212ENST00000604599 MAF1Q9H063 256 aa12.77□□□□□ -0.36
CDCA3-212ENST00000604599 RAB6CQ9H0N0 254 aa12.77□□□□□ -0.36
CDCA3-212ENST00000604599 PIH1D1Q9NWS0 290 aaKnown RBP12.77□□□□□ -0.36
CDCA3-212ENST00000604599 ARHGAP28Q9P2N2 729 aa12.77□□□□□ -0.36
CDCA3-212ENST00000604599 COPG2Q9UBF2 871 aa12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms