RNA–Protein interactions for RNA: ENST00000602574.5

COMMD3-215, Transcript of COMM domain containing 3, humanhuman

TSL 1 (best)

Gene COMMD3, Length 2,290 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-215ENST00000602574 MASP1P48740 699 aa9.1□□□□□ -0.95
COMMD3-215ENST00000602574 SLC18A1P54219 525 aa9.1□□□□□ -0.95
COMMD3-215ENST00000602574 AIF1P55008 147 aa9.1□□□□□ -0.95
COMMD3-215ENST00000602574 HADHBP55084 474 aaKnown RBP9.1□□□□□ -0.95
COMMD3-215ENST00000602574 IFI35P80217 286 aaPredicted RBP9.1□□□□□ -0.95
COMMD3-215ENST00000602574 NFX1Q12986 1120 aaKnown RBP9.1□□□□□ -0.95
COMMD3-215ENST00000602574 ITGADQ13349 1161 aa9.1□□□□□ -0.95
COMMD3-215ENST00000602574 TTF1Q15361 905 aaPredicted RBP9.1□□□□□ -0.95
COMMD3-215ENST00000602574 DLG2Q15700 870 aa9.1□□□□□ -0.95
COMMD3-215ENST00000602574 CLUL1Q15846 466 aa9.1□□□□□ -0.95
COMMD3-215ENST00000602574 DNAL1Q4LDG9 190 aa9.1□□□□□ -0.95
COMMD3-215ENST00000602574 TAF1BQ53T94 588 aaPredicted RBP9.1□□□□□ -0.95
COMMD3-215ENST00000602574 RILPL1Q5EBL4 403 aa9.1□□□□□ -0.95
COMMD3-215ENST00000602574 ZNF618Q5T7W0 954 aa9.1□□□□□ -0.95
COMMD3-215ENST00000602574 PIK3R6Q5UE93 754 aa9.1□□□□□ -0.95
COMMD3-215ENST00000602574 KLHDC7AQ5VTJ3 777 aa9.1□□□□□ -0.95
COMMD3-215ENST00000602574 TTC27Q6P3X3 843 aa9.1□□□□□ -0.95
COMMD3-215ENST00000602574 POMZP3Q6PJE2 187 aa9.1□□□□□ -0.95
COMMD3-215ENST00000602574 RASGRP3Q8IV61 690 aa9.1□□□□□ -0.95
COMMD3-215ENST00000602574 TSPAN14Q8NG11 270 aa9.1□□□□□ -0.95
COMMD3-215ENST00000602574 MCOLN3Q8TDD5 553 aa9.1□□□□□ -0.95
COMMD3-215ENST00000602574 TMC2Q8TDI7 906 aa9.1□□□□□ -0.95
COMMD3-215ENST00000602574 WASF1Q92558 559 aa9.1□□□□□ -0.95
COMMD3-215ENST00000602574 PIK3R3Q92569 461 aa9.1□□□□□ -0.95
COMMD3-215ENST00000602574 PBXIP1Q96AQ6 731 aa9.1□□□□□ -0.95
COMMD3-215ENST00000602574 C18orf8Q96DM3 657 aa9.1□□□□□ -0.95
COMMD3-215ENST00000602574 TMOD2Q9NZR1 351 aa9.1□□□□□ -0.95
COMMD3-215ENST00000602574 TXNDC16Q9P2K2 825 aa9.1□□□□□ -0.95
COMMD3-215ENST00000602574 MED16Q9Y2X0 877 aa9.1□□□□□ -0.95
COMMD3-215ENST00000602574 MYH10P35580 1976 aa9.1□□□□□ -0.95
COMMD3-215ENST00000602574 MN1Q10571 1320 aaPredicted RBP9.1□□□□□ -0.95
COMMD3-215ENST00000602574 RICTORQ6R327 1708 aa9.1□□□□□ -0.95
COMMD3-215ENST00000602574 A0A1B0GTQ1 180 aa9.1□□□□□ -0.95
COMMD3-215ENST00000602574 HEATR9A2RTY3 570 aa9.1□□□□□ -0.95
COMMD3-215ENST00000602574 HMX3A6NHT5 357 aa9.1□□□□□ -0.95
COMMD3-215ENST00000602574 A8MU76 341 aa9.1□□□□□ -0.95
COMMD3-215ENST00000602574 F8W036 122 aa9.1□□□□□ -0.95
COMMD3-215ENST00000602574 RNF225M0QZC1 329 aaPredicted RBP9.1□□□□□ -0.95
COMMD3-215ENST00000602574 DYNC1LI2O43237 492 aaPredicted RBP9.1□□□□□ -0.95
COMMD3-215ENST00000602574 ZBTB43O43298 467 aa9.1□□□□□ -0.95
COMMD3-215ENST00000602574 GTPBP6O43824 516 aaPredicted RBP9.1□□□□□ -0.95
COMMD3-215ENST00000602574 TM7SF2O76062 418 aa9.1□□□□□ -0.95
COMMD3-215ENST00000602574 INMTO95050 263 aa9.1□□□□□ -0.95
COMMD3-215ENST00000602574 KRT8P05787 483 aa9.1□□□□□ -0.95
COMMD3-215ENST00000602574 HEXBP07686 556 aa9.1□□□□□ -0.95
COMMD3-215ENST00000602574 ATP6V1B1P15313 513 aa9.1□□□□□ -0.95
COMMD3-215ENST00000602574 HNRNPH3P31942 346 aaKnown RBP9.1□□□□□ -0.95
COMMD3-215ENST00000602574 PGM1P36871 562 aa9.1□□□□□ -0.95
COMMD3-215ENST00000602574 ATP5OP48047 213 aa9.1□□□□□ -0.95
COMMD3-215ENST00000602574 COPZ1P61923 177 aa9.1□□□□□ -0.95
COMMD3-215ENST00000602574 YWHAGP61981 247 aaKnown RBP eCLIP9.1□□□□□ -0.95
COMMD3-215ENST00000602574 IL9RQ01113 521 aa9.1□□□□□ -0.95
COMMD3-215ENST00000602574 PLD1Q13393 1074 aa9.1□□□□□ -0.95
COMMD3-215ENST00000602574 AUHQ13825 339 aaKnown RBP9.1□□□□□ -0.95
COMMD3-215ENST00000602574 DMC1Q14565 340 aa9.1□□□□□ -0.95
COMMD3-215ENST00000602574 NCF4Q15080 339 aa9.1□□□□□ -0.95
COMMD3-215ENST00000602574 ABCB5Q2M3G0 1257 aa9.1□□□□□ -0.95
COMMD3-215ENST00000602574 SLC9C1Q4G0N8 1177 aa9.1□□□□□ -0.95
COMMD3-215ENST00000602574 FIGNQ5HY92 759 aa9.1□□□□□ -0.95
COMMD3-215ENST00000602574 PPP1R26Q5T8A7 1209 aaPredicted RBP9.1□□□□□ -0.95
COMMD3-215ENST00000602574 UBE2UQ5VVX9 321 aa9.1□□□□□ -0.95
COMMD3-215ENST00000602574 PRMT9Q6P2P2 845 aa9.1□□□□□ -0.95
COMMD3-215ENST00000602574 LDHAL6AQ6ZMR3 332 aa9.1□□□□□ -0.95
COMMD3-215ENST00000602574 PLEKHG7Q6ZR37 379 aa9.1□□□□□ -0.95
COMMD3-215ENST00000602574 RIPOR1Q6ZS17 1223 aa9.1□□□□□ -0.95
COMMD3-215ENST00000602574 HTR3DQ70Z44 454 aa9.1□□□□□ -0.95
COMMD3-215ENST00000602574 ZER1Q7Z7L7 766 aa9.1□□□□□ -0.95
COMMD3-215ENST00000602574 USP37Q86T82 979 aa9.1□□□□□ -0.95
COMMD3-215ENST00000602574 TMPRSS6Q8IU80 811 aa9.1□□□□□ -0.95
COMMD3-215ENST00000602574 LACC1Q8IV20 430 aa9.1□□□□□ -0.95
COMMD3-215ENST00000602574 CAMKK1Q8N5S9 505 aa9.1□□□□□ -0.95
COMMD3-215ENST00000602574 SLC15A4Q8N697 577 aa9.1□□□□□ -0.95
COMMD3-215ENST00000602574 FNDC5Q8NAU1 212 aa9.1□□□□□ -0.95
COMMD3-215ENST00000602574 GDPD5Q8WTR4 605 aa9.1□□□□□ -0.95
COMMD3-215ENST00000602574 MYDGFQ969H8 173 aa9.1□□□□□ -0.95
COMMD3-215ENST00000602574 EDC3Q96F86 508 aaKnown RBP9.1□□□□□ -0.95
COMMD3-215ENST00000602574 MROH8Q9H579 483 aa9.1□□□□□ -0.95
COMMD3-215ENST00000602574 NHEJ1Q9H9Q4 299 aaPredicted RBP9.1□□□□□ -0.95
COMMD3-215ENST00000602574 DNMT3BQ9UBC3 853 aaKnown RBP9.1□□□□□ -0.95
COMMD3-215ENST00000602574 PPARGC1AQ9UBK2 798 aaKnown RBP9.1□□□□□ -0.95
COMMD3-215ENST00000602574 DNMT3LQ9UJW3 386 aa9.1□□□□□ -0.95
COMMD3-215ENST00000602574 ZMIZ1Q9ULJ6 1067 aa9.1□□□□□ -0.95
COMMD3-215ENST00000602574 PPM1HQ9ULR3 514 aa9.1□□□□□ -0.95
COMMD3-215ENST00000602574 ANGEL1Q9UNK9 670 aaKnown RBP9.1□□□□□ -0.95
COMMD3-215ENST00000602574 NOC2LQ9Y3T9 749 aaKnown RBP9.1□□□□□ -0.95
COMMD3-215ENST00000602574 DTNAQ9Y4J8 743 aa9.1□□□□□ -0.95
COMMD3-215ENST00000602574 PCDHGA2Q9Y5H1 932 aa9.1□□□□□ -0.95
COMMD3-215ENST00000602574 CLIC4Q9Y696 253 aa9.1□□□□□ -0.95
COMMD3-215ENST00000602574 MYH4Q9Y623 1939 aa9.09□□□□□ -0.95
COMMD3-215ENST00000602574 PCM1Q15154 2024 aa9.09□□□□□ -0.95
COMMD3-215ENST00000602574 A0A1W2PQJ5 194 aa9.09□□□□□ -0.95
COMMD3-215ENST00000602574 C12orf71A8MTZ7 269 aa9.09□□□□□ -0.95
COMMD3-215ENST00000602574 ZNF487B1APH4 448 aa9.09□□□□□ -0.95
COMMD3-215ENST00000602574 PRRT4C9JH25 899 aa9.09□□□□□ -0.95
COMMD3-215ENST00000602574 H0YJX3 145 aa9.09□□□□□ -0.95
COMMD3-215ENST00000602574 hCG_1984214I3L0E3 225 aa9.09□□□□□ -0.95
COMMD3-215ENST00000602574 GNB5O14775 395 aa9.09□□□□□ -0.95
COMMD3-215ENST00000602574 NDUFS2O75306 463 aa9.09□□□□□ -0.95
COMMD3-215ENST00000602574 IL6P05231 212 aa9.09□□□□□ -0.95
COMMD3-215ENST00000602574 HSMCR30P0CW71 290 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms