RNA–Protein interactions for RNA: ENST00000600659.2

RPS28-203, Transcript of ribosomal protein S28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPS28, Length 1,326 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-203ENST00000600659 MS4A13Q5J8X5 152 aa16.35■□□□□ 0.21
RPS28-203ENST00000600659 MON1BQ7L1V2 547 aa16.35■□□□□ 0.21
RPS28-203ENST00000600659 KIAA0907Q7Z7F0 614 aaPredicted RBP16.35■□□□□ 0.21
RPS28-203ENST00000600659 ALYREFQ86V81 257 aaKnown RBP16.35■□□□□ 0.21
RPS28-203ENST00000600659 PHF13Q86YI8 300 aaPredicted RBP16.35■□□□□ 0.21
RPS28-203ENST00000600659 CCDC33Q8N5R6 958 aa16.35■□□□□ 0.21
RPS28-203ENST00000600659 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.35■□□□□ 0.21
RPS28-203ENST00000600659 DDI1Q8WTU0 396 aa16.35■□□□□ 0.21
RPS28-203ENST00000600659 ACOX2Q99424 681 aa16.35■□□□□ 0.21
RPS28-203ENST00000600659 AGPAT1Q99943 283 aa16.35■□□□□ 0.21
RPS28-203ENST00000600659 IRX2Q9BZI1 471 aaPredicted RBP16.35■□□□□ 0.21
RPS28-203ENST00000600659 EPC1Q9H2F5 836 aa16.35■□□□□ 0.21
RPS28-203ENST00000600659 FAM204AQ9H8W3 233 aa16.35■□□□□ 0.21
RPS28-203ENST00000600659 PIGVQ9NUD9 493 aa16.35■□□□□ 0.21
RPS28-203ENST00000600659 AIPL1Q9NZN9 384 aa16.35■□□□□ 0.21
RPS28-203ENST00000600659 NYNRINQ9P2P1 1898 aaKnown RBP16.35■□□□□ 0.21
RPS28-203ENST00000600659 GJB6O95452 261 aa16.34■□□□□ 0.21
RPS28-203ENST00000600659 KLF8O95600 359 aaPredicted RBP16.34■□□□□ 0.21
RPS28-203ENST00000600659 PRKCIP41743 596 aa16.34■□□□□ 0.21
RPS28-203ENST00000600659 PXNP49023 591 aaPredicted RBP16.34■□□□□ 0.21
RPS28-203ENST00000600659 SLC11A2P49281 568 aa16.34■□□□□ 0.21
RPS28-203ENST00000600659 ATXN1P54253 815 aaKnown RBP16.34■□□□□ 0.21
RPS28-203ENST00000600659 SNX16P57768 344 aa16.34■□□□□ 0.21
RPS28-203ENST00000600659 RPS24P62847 133 aaKnown RBP16.34■□□□□ 0.21
RPS28-203ENST00000600659 SRSF5Q13243 272 aaKnown RBP16.34■□□□□ 0.21
RPS28-203ENST00000600659 CRY1Q16526 586 aa16.34■□□□□ 0.21
RPS28-203ENST00000600659 HSF5Q4G112 596 aaPredicted RBP16.34■□□□□ 0.21
RPS28-203ENST00000600659 MPP7Q5T2T1 576 aa16.34■□□□□ 0.21
RPS28-203ENST00000600659 ZC3H14Q6PJT7 736 aaKnown RBP16.34■□□□□ 0.21
RPS28-203ENST00000600659 ARCQ7LC44 396 aa16.34■□□□□ 0.21
RPS28-203ENST00000600659 WDR5BQ86VZ2 330 aa16.34■□□□□ 0.21
RPS28-203ENST00000600659 LONP2Q86WA8 852 aa16.34■□□□□ 0.21
RPS28-203ENST00000600659 TXNDC5Q8NBS9 432 aaKnown RBP16.34■□□□□ 0.21
RPS28-203ENST00000600659 NKD2Q969F2 451 aaPredicted RBP16.34■□□□□ 0.21
RPS28-203ENST00000600659 TMA16Q96EY4 203 aaKnown RBP16.34■□□□□ 0.21
RPS28-203ENST00000600659 BTN2A3PQ96KV6 586 aa16.34■□□□□ 0.21
RPS28-203ENST00000600659 TBCBQ99426 244 aa16.34■□□□□ 0.21
RPS28-203ENST00000600659 EDEM3Q9BZQ6 932 aa16.34■□□□□ 0.21
RPS28-203ENST00000600659 METTL5Q9NRN9 209 aaKnown RBP16.34■□□□□ 0.21
RPS28-203ENST00000600659 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.34■□□□□ 0.21
RPS28-203ENST00000600659 TAS2R14Q9NYV8 317 aa16.34■□□□□ 0.21
RPS28-203ENST00000600659 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.34■□□□□ 0.21
RPS28-203ENST00000600659 IFNKQ9P0W0 207 aa16.34■□□□□ 0.21
RPS28-203ENST00000600659 SDK1Q7Z5N4 2213 aa16.34■□□□□ 0.21
RPS28-203ENST00000600659 ABCA7Q8IZY2 2146 aa16.33■□□□□ 0.21
RPS28-203ENST00000600659 FRYLO94915 3013 aa16.33■□□□□ 0.21
RPS28-203ENST00000600659 SYNJ2BP-COX16A0A087WUM0 186 aa16.33■□□□□ 0.2
RPS28-203ENST00000600659 CCDC163A0A0D9SF12 145 aa16.33■□□□□ 0.2
RPS28-203ENST00000600659 GOLGA6L19H0YKK7 550 aa16.33■□□□□ 0.2
RPS28-203ENST00000600659 GOLGA8SH3BPF8 625 aa16.33■□□□□ 0.2
RPS28-203ENST00000600659 HRO43593 1189 aa16.33■□□□□ 0.2
RPS28-203ENST00000600659 APOEP02649 317 aa16.33■□□□□ 0.2
RPS28-203ENST00000600659 CYBBP04839 570 aa16.33■□□□□ 0.2
RPS28-203ENST00000600659 ENPP2Q13822 863 aa16.33■□□□□ 0.2
RPS28-203ENST00000600659 PPP2R5DQ14738 602 aa16.33■□□□□ 0.2
RPS28-203ENST00000600659 PREPLQ4J6C6 727 aaPredicted RBP16.33■□□□□ 0.2
RPS28-203ENST00000600659 RAB6CQ53S08 254 aa16.33■□□□□ 0.2
RPS28-203ENST00000600659 HEATR6Q6AI08 1181 aaKnown RBP16.33■□□□□ 0.2
RPS28-203ENST00000600659 ZNF571Q7Z3V5 609 aaPredicted RBP16.33■□□□□ 0.2
RPS28-203ENST00000600659 PHLDB2Q86SQ0 1253 aa16.33■□□□□ 0.2
RPS28-203ENST00000600659 RASSF3Q86WH2 238 aa16.33■□□□□ 0.2
RPS28-203ENST00000600659 CAMKK1Q8N5S9 505 aa16.33■□□□□ 0.2
RPS28-203ENST00000600659 EMC1Q8N766 993 aa16.33■□□□□ 0.2
RPS28-203ENST00000600659 ZNF513Q8N8E2 541 aaPredicted RBP16.33■□□□□ 0.2
RPS28-203ENST00000600659 CCDC26Q8TAB7 109 aa16.33■□□□□ 0.2
RPS28-203ENST00000600659 JOSD2Q8TAC2 188 aa16.33■□□□□ 0.2
RPS28-203ENST00000600659 KCNV2Q8TDN2 545 aa16.33■□□□□ 0.2
RPS28-203ENST00000600659 SLC2A11Q9BYW1 496 aa16.33■□□□□ 0.2
RPS28-203ENST00000600659 RAB6CQ9H0N0 254 aa16.33■□□□□ 0.2
RPS28-203ENST00000600659 TSPY26PQ9H489 355 aa16.33■□□□□ 0.2
RPS28-203ENST00000600659 COX16Q9P0S2 106 aa16.33■□□□□ 0.2
RPS28-203ENST00000600659 SLC8A2Q9UPR5 921 aa16.33■□□□□ 0.2
RPS28-203ENST00000600659 PTPRZ1P23471 2315 aaPredicted RBP16.32■□□□□ 0.2
RPS28-203ENST00000600659 A0A1W2PQF6 199 aa16.32■□□□□ 0.2
RPS28-203ENST00000600659 M0QYT0 321 aa16.32■□□□□ 0.2
RPS28-203ENST00000600659 TBL1XO60907 577 aa16.32■□□□□ 0.2
RPS28-203ENST00000600659 TACR2P21452 398 aa16.32■□□□□ 0.2
RPS28-203ENST00000600659 CCR1P32246 355 aa16.32■□□□□ 0.2
RPS28-203ENST00000600659 CXCR3P49682 368 aa16.32■□□□□ 0.2
RPS28-203ENST00000600659 SULT1E1P49888 294 aa16.32■□□□□ 0.2
RPS28-203ENST00000600659 NRLP54845 237 aa16.32■□□□□ 0.2
RPS28-203ENST00000600659 RNASE9P60153 205 aaKnown RBP16.32■□□□□ 0.2
RPS28-203ENST00000600659 TPM4P67936 248 aa16.32■□□□□ 0.2
RPS28-203ENST00000600659 NME3Q13232 169 aa16.32■□□□□ 0.2
RPS28-203ENST00000600659 SLC25A52Q3SY17 297 aa16.32■□□□□ 0.2
RPS28-203ENST00000600659 RAP1GAP2Q684P5 730 aa16.32■□□□□ 0.2
RPS28-203ENST00000600659 HGSNATQ68CP4 663 aa16.32■□□□□ 0.2
RPS28-203ENST00000600659 ANKS1BQ7Z6G8 1248 aa16.32■□□□□ 0.2
RPS28-203ENST00000600659 ADIPOR2Q86V24 386 aa16.32■□□□□ 0.2
RPS28-203ENST00000600659 CFAP57Q96MR6 1250 aa16.32■□□□□ 0.2
RPS28-203ENST00000600659 GABRG3Q99928 467 aa16.32■□□□□ 0.2
RPS28-203ENST00000600659 XPO4Q9C0E2 1151 aaKnown RBP16.32■□□□□ 0.2
RPS28-203ENST00000600659 SEMA4AQ9H3S1 761 aa16.32■□□□□ 0.2
RPS28-203ENST00000600659 HAUS4Q9H6D7 363 aa16.32■□□□□ 0.2
RPS28-203ENST00000600659 ARHGEF38Q9NXL2 777 aa16.32■□□□□ 0.2
RPS28-203ENST00000600659 RRN3Q9NYV6 651 aa16.32■□□□□ 0.2
RPS28-203ENST00000600659 EBF1Q9UH73 591 aa16.32■□□□□ 0.2
RPS28-203ENST00000600659 CHD5Q8TDI0 1954 aa16.32■□□□□ 0.2
RPS28-203ENST00000600659 CFAP54Q96N23 3096 aa16.32■□□□□ 0.2
RPS28-203ENST00000600659 TNRC6BQ9UPQ9 1833 aaKnown RBP16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms